; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026397 (gene) of Chayote v1 genome

Gene IDSed0026397
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:3062123..3062621
RNA-Seq ExpressionSed0026397
SyntenySed0026397
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571236.1 hypothetical protein SDJN03_30151, partial [Cucurbita argyrosperma subsp. sororia]7.6e-1051.72Show/hide
Query:  HLCLLSLLLLPLLLPSTSYLLVHGRALPLVPSGKIPQPDDSCATDFKLIPKICGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
        HLCLLSLLLLPLLLP+TS  L+H RAL            +S A +FKL PK  GGGG         + ++R++T  SGPSRRG+GHK
Subjt:  HLCLLSLLLLPLLLPSTSYLLVHGRALPLVPSGKIPQPDDSCATDFKLIPKICGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
KGN63303.1 hypothetical protein Csa_022628 [Cucumis sativus]4.0e-1156Show/hide
Query:  MRHLCLLSLLLLPLLLP-STSYLLVHGRALPLVPSGKIPQPD-----DSCATDFKLIPKI-----CGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
        MRHLCLLSLLLLPLLLP +TS LLVHGRAL         QPD      S A +FKL PK        GGGGSD S      ++R++T  SGPSRRG+GHK
Subjt:  MRHLCLLSLLLLPLLLP-STSYLLVHGRALPLVPSGKIPQPD-----DSCATDFKLIPKI-----CGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
TrEMBL top hitse value%identityAlignment
A0A0A0LNA9 Uncharacterized protein2.0e-1156Show/hide
Query:  MRHLCLLSLLLLPLLLP-STSYLLVHGRALPLVPSGKIPQPD-----DSCATDFKLIPKI-----CGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
        MRHLCLLSLLLLPLLLP +TS LLVHGRAL         QPD      S A +FKL PK        GGGGSD S      ++R++T  SGPSRRG+GHK
Subjt:  MRHLCLLSLLLLPLLLP-STSYLLVHGRALPLVPSGKIPQPD-----DSCATDFKLIPKI-----CGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCATCTTTGCCTACTCTCTCTGCTCCTCCTACCCTTGCTTCTTCCCTCCACCTCTTACTTACTCGTCCACGGGAGAGCCCTCCCGCTCGTTCCCTCGGGCAAGAT
CCCGCAGCCGGATGACTCCTGTGCCACTGACTTCAAATTGATACCGAAGATTTGTGGCGGTGGTGGTGGTTCCGACATGTCGTATCGGAGGAAGTTGTTGGACGAGCGGT
TGTACACGTTTGAGTCCGGACCCAGCAGGAGGGGAGAAGGGCACAAATGA
mRNA sequenceShow/hide mRNA sequence
CCTCAACAACATCAATTTCAACAACAAAATTATGAGGCATCTTTGCCTACTCTCTCTGCTCCTCCTACCCTTGCTTCTTCCCTCCACCTCTTACTTACTCGTCCACGGGA
GAGCCCTCCCGCTCGTTCCCTCGGGCAAGATCCCGCAGCCGGATGACTCCTGTGCCACTGACTTCAAATTGATACCGAAGATTTGTGGCGGTGGTGGTGGTTCCGACATG
TCGTATCGGAGGAAGTTGTTGGACGAGCGGTTGTACACGTTTGAGTCCGGACCCAGCAGGAGGGGAGAAGGGCACAAATGAAGTTTGGGATTGATTGTACAAAAATTCTT
TTCACAGCTTTATATGTTACTGTCCTAATTATAAACTCATTATGTCATTATATCATCATGGGTTGAGTATGTTTGTGATTTTCAGCATTTGGATTTGAGCCTATTGCTCT
GTTTTTTTTTTAAAAAAAGAAATTATAAACTTATTTCTAGTTCTCATGGTTATGATAAA
Protein sequenceShow/hide protein sequence
MRHLCLLSLLLLPLLLPSTSYLLVHGRALPLVPSGKIPQPDDSCATDFKLIPKICGGGGGSDMSYRRKLLDERLYTFESGPSRRGEGHK