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Sed0026400 (gene) of Chayote v1 genome

Gene IDSed0026400
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:39960002..39960202
RNA-Seq ExpressionSed0026400
SyntenySed0026400
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015596.1 hypothetical protein SDJN02_23232, partial [Cucurbita argyrosperma subsp. argyrosperma]5.3e-2476.81Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS---AAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVA+G LFGFGVFK+GFHK+KDK DFCDGG+CGS      GRPFFAAPPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS---AAAGRPFFAAPPPRF

KAG7028302.1 hypothetical protein SDJN02_09483, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-2278.79Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF
        MCCFGK+C+FC+CLVLV VAIG+LFGFG+FK+GFHK+KDKVDFCDG LCG    GRPFFAAPP RF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF

XP_008449006.1 PREDICTED: uncharacterized protein LOC103491008 [Cucumis melo]6.9e-2481.82Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVAIG+LFGFGVFK+GFHK+KDKVDFCDGGLCG    GRPFF APPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF

XP_022932418.1 uncharacterized protein LOC111438773 [Cucurbita moschata]3.1e-2479.1Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS-AAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVA+G LFGFGVFK+GFHK+KDK DFCDGG+CGS    GRPFFAAPPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS-AAAGRPFFAAPPPRF

XP_038905566.1 uncharacterized protein Os04g0629400 [Benincasa hispida]4.0e-2477.14Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLC----GSAAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVAIG+LFGFGVFK+GFHK+KDKVD+CDGGLC    G    GRPFFAAPPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLC----GSAAAGRPFFAAPPPRF

TrEMBL top hitse value%identityAlignment
A0A0A0L2S1 Uncharacterized protein3.2e-1971.21Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF
        MCC GK+C+ CTCL+LVVVAIG+LFGFGVFK+GFHK+KDKVDFCDGG CG    G    A PPP F
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF

A0A151U2Q0 Uncharacterized protein3.0e-1768.66Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFA-APPPRF
        MCC G++C+ CTCL+LVV+AIG+LFGFGVFK GFHK+KD V FCD   CG AA GRPF   APPP F
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFA-APPPRF

A0A1S3BL26 uncharacterized protein LOC1034910083.3e-2481.82Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVAIG+LFGFGVFK+GFHK+KDKVDFCDGGLCG    GRPFF APPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF

A0A6J1EWB7 uncharacterized protein LOC1114387731.5e-2479.1Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS-AAAGRPFFAAPPPRF
        MCCFGK+C+ CTCL+LVVVA+G LFGFGVFK+GFHK+KDK DFCDGG+CGS    GRPFFAAPPPRF
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGS-AAAGRPFFAAPPPRF

I1JJM5 Uncharacterized protein1.1e-1667.16Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFA-APPPRF
        MCC G++C+ CTCLVLVV+AIG+LFGFGVFK GFHK+KD V FCD    G+A  GRPF   APPP F
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFA-APPPRF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13275.1 unknown protein6.4e-1252.31Show/hide
Query:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDF-CDGGLCGSAAAGRPFFAAPPP
        MCC G+IC+ CTCL+LVV+AIG LFGFGVFK+GFHK+ + +   CD         GR  +  P P
Subjt:  MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDF-CDGGLCGSAAAGRPFFAAPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTGCTTTGGAAAGATCTGTGTGTTCTGCACCTGCCTCGTTCTCGTTGTCGTCGCCATCGGAATGCTCTTCGGATTCGGAGTTTTCAAAGAGGGATTTCATAAGGT
CAAGGACAAGGTCGATTTCTGCGACGGCGGTCTCTGCGGTAGCGCCGCCGCCGGCCGCCCTTTCTTCGCTGCGCCTCCTCCTCGCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGCTGCTTTGGAAAGATCTGTGTGTTCTGCACCTGCCTCGTTCTCGTTGTCGTCGCCATCGGAATGCTCTTCGGATTCGGAGTTTTCAAAGAGGGATTTCATAAGGT
CAAGGACAAGGTCGATTTCTGCGACGGCGGTCTCTGCGGTAGCGCCGCCGCCGGCCGCCCTTTCTTCGCTGCGCCTCCTCCTCGCTTCTAG
Protein sequenceShow/hide protein sequence
MCCFGKICVFCTCLVLVVVAIGMLFGFGVFKEGFHKVKDKVDFCDGGLCGSAAAGRPFFAAPPPRF