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Sed0026413 (gene) of Chayote v1 genome

Gene IDSed0026413
OrganismSechium edule (Chayote v1)
DescriptionCytochrome c oxidase assembly protein cox16
Genome locationLG06:44422161..44425696
RNA-Seq ExpressionSed0026413
SyntenySed0026413
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142437.1 uncharacterized protein LOC101208712 isoform X1 [Cucumis sativus]1.1e-6090.84Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMGQS EP KI SA N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQ+KVDINNYEYK+IPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

XP_008446874.1 PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo]1.9e-6090.08Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMG+STEP KI SA N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQE+VDINNYEYK+IP+PTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]7.1e-6090.84Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMGQSTE  K  SA N  R+SPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKVDINNYEYK+IPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

XP_023533207.1 uncharacterized protein LOC111795161 [Cucurbita pepo subsp. pepo]1.6e-5990.08Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMGQSTE  K  SA N  R+SPSMF+RWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKVDINNYEYK+IPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]3.2e-6090.08Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAG+GQSTEP KI S  N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKVDINNYEYK+IPKPTD+TS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

TrEMBL top hitse value%identityAlignment
A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X19.1e-6190.08Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMG+STEP KI SA N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQE+VDINNYEYK+IP+PTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

A0A5A7SXX4 Cytochrome c oxidase assembly protein cox169.1e-5381.06Show/hide
Query:  TMISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKN
        T I TEAGMG+STEP KI SA N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAF   +
Subjt:  TMISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKN

Query:  ISLEEELRALQEKVDINNYEYKKIPKPTDRTS
        + + ++ +ALQE+VDINNYEYK+IP+PTDRTS
Subjt:  ISLEEELRALQEKVDINNYEYKKIPKPTDRTS

A0A6J1CBH5 uncharacterized protein LOC1110100641.0e-5686.26Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M S E GM QS EP KI SA N  RASPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKV+IN+YEYK+IPKP+ RTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

A0A6J1GWL5 uncharacterized protein LOC1114581293.5e-6090.84Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAGMGQSTE  K  SA N  R+SPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKVDINNYEYK+IPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

A0A6J1HX89 uncharacterized protein LOC1114686481.0e-5990.08Show/hide
Query:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI
        M STEAG+GQSTE  K  SA N  R+SPSMFRRWGRRHPFIRYGLPMISLTV GAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDA+KPKNI
Subjt:  MISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNI

Query:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS
        SLEEELRALQEKVDINNYEYK+IPKPTDRTS
Subjt:  SLEEELRALQEKVDINNYEYKKIPKPTDRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein1.1e-4570.73Show/hide
Query:  GQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNISLEEELRA
        G  T PT        ++ S + F+RWGRRHPF+RYGLPMISLTVFGA+GLG LLQGSKDIAKVKDDQEWEI E RKALSRTGP+DA+KPKN S+E+EL+A
Subjt:  GQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNISLEEELRA

Query:  LQEKVDINNYEYKKIPKPTDRTS
        +QEKVDIN YEYKKIPK  +  S
Subjt:  LQEKVDINNYEYKKIPKPTDRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTACAATGATCAGCACAGAGGCAGGAATGGGTCAGTCTACAGAACCAACAAAGATTAAATCCGCCAAAAATGGAATTCGGGCATCGCCATCCATGTTTAGAAG
ATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGTTTGGGGCAGTGGGTCTTGGCCATCTCTTGCAAGGAAGTAAGGATATTGCAA
AGGTAAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAAGCGCTTTCAAGAACAGGACCTATTGATGCATTCAAGCCGAAAAACATATCTCTAGAGGAGGAACTG
AGGGCTTTACAAGAAAAGGTAGACATCAATAACTATGAGTACAAGAAAATTCCAAAGCCTACCGATCGAACGTCCTAA
mRNA sequenceShow/hide mRNA sequence
GCGATGATTCGAGACATCGGCTTGTTTTTTCAGTTTCATTCACTTTCTTATTGTTCGTCAACACCATCAGCTTGGCGTAGATTGGGGTGGCACAGTGGTTGAAGACTTGA
GCTTTAAAGGTTTTTTCATGGTTTGTACAATGATCAGCACAGAGGCAGGAATGGGTCAGTCTACAGAACCAACAAAGATTAAATCCGCCAAAAATGGAATTCGGGCATCG
CCATCCATGTTTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACTGTGTTTGGGGCAGTGGGTCTTGGCCATCTCTTGCAAGG
AAGTAAGGATATTGCAAAGGTAAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAAGCGCTTTCAAGAACAGGACCTATTGATGCATTCAAGCCGAAAAACATAT
CTCTAGAGGAGGAACTGAGGGCTTTACAAGAAAAGGTAGACATCAATAACTATGAGTACAAGAAAATTCCAAAGCCTACCGATCGAACGTCCTAAAACTTTGCCCTCCTT
GATGCATACGAGAGAACTGCTCAGGTATTTTTGTTTAAGAACAATTTAGGTCATACCTTGGCATGATCTATCTTTTACTGTCTACGTATGTGGCTCAATTTAGGCCACCT
TTTTTGTCTGAATTTTGTTTTGGATAAAAGAGCACTAAAATGTAGCCTAAATTGGAGGTCAGGTCAGGCATGACTTAAATTGAGCTCTCTTTTTGTTTCCTACCTGTGAT
GTTTTGTATATGTATGAGATGCAAGTTAGATTTAGTTTCTGATGAGAATATTTGGAATGGATGTTTGTCTCCAAGGGGTGGT
Protein sequenceShow/hide protein sequence
MVCTMISTEAGMGQSTEPTKIKSAKNGIRASPSMFRRWGRRHPFIRYGLPMISLTVFGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAFKPKNISLEEEL
RALQEKVDINNYEYKKIPKPTDRTS