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Sed0026469 (gene) of Chayote v1 genome

Gene IDSed0026469
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR24-like
Genome locationLG01:1880847..1881362
RNA-Seq ExpressionSed0026469
SyntenySed0026469
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008457626.1 PREDICTED: auxin-responsive protein SAUR24-like [Cucumis melo]2.1e-4294.68Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS
        MGFRLPSSLIPQAKQLLRRSSG  SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS

XP_022944378.1 auxin-responsive protein SAUR24-like [Cucurbita moschata]1.2e-4292.63Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSG +SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

XP_022986738.1 auxin-responsive protein SAUR24-like [Cucurbita maxima]2.1e-4292.63Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSG +SAVPKGHVAVYVGE QRKRFVIPI+YLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

XP_023512614.1 auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]9.5e-4393.68Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSG +SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

XP_038901978.1 auxin-responsive protein SAUR24-like [Benincasa hispida]2.8e-4293.62Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS
        MGFRLPSSLIPQAKQLLRRSSG  SAVPKGHVAVYVGE+QRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS

TrEMBL top hitse value%identityAlignment
A0A1S3C5H8 auxin-responsive protein SAUR24-like1.0e-4294.68Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS
        MGFRLPSSLIPQAKQLLRRSSG  SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS

A0A5A7TUZ6 Auxin-responsive protein SAUR24-like1.0e-4294.68Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS
        MGFRLPSSLIPQAKQLLRRSSG  SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQ+
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQS

A0A6J1FY01 auxin-responsive protein SAUR24-like6.0e-4392.63Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSG +SAVPKGHVAVYVGE QRKRFVIPISYLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

A0A6J1G776 auxin-responsive protein SAUR24-like1.3e-4292.63Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLLRRSSG  SAVPKGHVAVYVGE +RKRFVIPISYLNH SFQQLLSRAEEEFGFDHP GGLTIPCGEDAF+DLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

A0A6J1JHE8 auxin-responsive protein SAUR24-like1.0e-4292.63Show/hide
Query:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        MGFRLPSSLIPQAKQLL+RSSG +SAVPKGHVAVYVGE QRKRFVIPI+YLNHLSFQQLL+RAEEEFGFDHP GGLTIPCGEDAFIDLTSRLQSS
Subjt:  MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

SwissProt top hitse value%identityAlignment
Q9FJF6 Auxin-responsive protein SAUR236.4e-2667.5Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRL
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRL
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRL

Q9FJF7 Auxin-responsive protein SAUR221.7e-2666.67Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

Q9FJG0 Auxin-responsive protein SAUR209.9e-2767.9Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+  +SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSR Q
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

Q9FJG1 Auxin-responsive protein SAUR191.4e-2565.43Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYL+  SFQ LLS++EEEFGF HP GGLTIPC ED FI++TSRLQ
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

Q9FK62 Auxin-responsive protein SAUR246.9e-2869.14Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family6.0e-2761.96Show/hide
Query:  SSLIPQAKQLLRRSSGTSS--AVPKGHVAVYVGE-MQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS
        S ++  +KQLL+  S +S+  A+PKGH+AVYVGE MQ++RFV+P++YL+H  FQ+LL +AEEEFGFDHP GGLTIPC E  FIDL SRL +S
Subjt:  SSLIPQAKQLLRRSSGTSS--AVPKGHVAVYVGE-MQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS

AT5G18020.1 SAUR-like auxin-responsive protein family7.1e-2867.9Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+  +SA PKG +AVYVGE Q+KR+++PISYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSR Q
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

AT5G18050.1 SAUR-like auxin-responsive protein family1.2e-2766.67Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++E+EFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ

AT5G18060.1 SAUR-like auxin-responsive protein family4.6e-2767.5Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRL
        AK++L RS+   SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRL
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRL

AT5G18080.1 SAUR-like auxin-responsive protein family4.9e-2969.14Show/hide
Query:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ
        AK++L RS+G  SA PKG +AVYVGE Q+KR+++P+SYLN  SFQ LLS++EEEFGFDHP GGLTIPC ED FI++TSRLQ
Subjt:  AKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTCGCCTTCCATCCTCGTTGATCCCTCAGGCCAAGCAACTGCTCCGAAGAAGCTCGGGAACTTCCTCGGCCGTGCCGAAAGGCCACGTCGCCGTCTACGTCGG
AGAGATGCAGAGGAAGCGGTTCGTGATTCCGATTTCGTATTTGAATCACCTCTCGTTTCAACAGCTTCTCAGTCGAGCCGAGGAGGAGTTTGGATTCGATCATCCGGCGG
GCGGTTTGACGATTCCTTGCGGAGAAGATGCGTTCATCGACCTCACTTCTAGATTGCAATCCTCTTGA
mRNA sequenceShow/hide mRNA sequence
CTCAAATCCCCATTTTCCACTTTTTCTTCGATCAACCGAAGCTACATTCCACCATTCCCTTTTTCTCCCCAATCCTCTTCGCTATGGGGTTTCGCCTTCCATCCTCGTTG
ATCCCTCAGGCCAAGCAACTGCTCCGAAGAAGCTCGGGAACTTCCTCGGCCGTGCCGAAAGGCCACGTCGCCGTCTACGTCGGAGAGATGCAGAGGAAGCGGTTCGTGAT
TCCGATTTCGTATTTGAATCACCTCTCGTTTCAACAGCTTCTCAGTCGAGCCGAGGAGGAGTTTGGATTCGATCATCCGGCGGGCGGTTTGACGATTCCTTGCGGAGAAG
ATGCGTTCATCGACCTCACTTCTAGATTGCAATCCTCTTGAATGTGTGAAAGAACTAGGGTCGATGGTTCGTGATTTTTGCCTTTTGGCTTTTTTTTTTGTTTTTTTTTT
TTTTTGTGGGGATTGTTCTGTTGTTGCTGATTTTTTTGCGTTCTGACTGGCGTTGGAATGTTTGATGGAACCCAAT
Protein sequenceShow/hide protein sequence
MGFRLPSSLIPQAKQLLRRSSGTSSAVPKGHVAVYVGEMQRKRFVIPISYLNHLSFQQLLSRAEEEFGFDHPAGGLTIPCGEDAFIDLTSRLQSS