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Sed0026473 (gene) of Chayote v1 genome

Gene IDSed0026473
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG04:36496409..36497031
RNA-Seq ExpressionSed0026473
SyntenySed0026473
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147230.1 uncharacterized protein LOC111016228 [Momordica charantia]8.1e-0837.04Show/hide
Query:  MSISFYL-LCLLCISFQAWQLQALHLADHKFHKELQAPIKGGLEK-VVVSWDKQTIESMKLSPPKIEEEEELV---------------------------
        MSISFYL L LL ISFQA   ++L  AD+K   +LQA ++G L + V++SW+K   E+MKLS  K  EE+                              
Subjt:  MSISFYL-LCLLCISFQAWQLQALHLADHKFHKELQAPIKGGLEK-VVVSWDKQTIESMKLSPPKIEEEEELV---------------------------

Query:  -----HDDHNNKVGRNDGVFSLDYVQPETHPPTIN
             H D + K+  N+GVF  DY    THPP+ N
Subjt:  -----HDDHNNKVGRNDGVFSLDYVQPETHPPTIN
XP_031743890.1 uncharacterized protein LOC116404719 [Cucumis sativus]2.1e-1143.38Show/hide
Query:  MSISFY--LLCLLCISF-QAWQLQALHLADHKFHKELQAPIKGGLEKVVVSWDKQTIESMKLSPPKIEEEEE----------------------------
        MSISFY  LL L+CISF      Q L L  +KF K LQAPIKG + K+V+S ++  IE MKLS PK  EEEE                            
Subjt:  MSISFY--LLCLLCISF-QAWQLQALHLADHKFHKELQAPIKGGLEKVVVSWDKQTIESMKLSPPKIEEEEE----------------------------

Query:  ---LVHDDHNN-KVGRNDGVFSLDYVQPETHPPTIN
           + HDD ++ KV  NDGVFS DY    THPP+ N
Subjt:  ---LVHDDHNN-KVGRNDGVFSLDYVQPETHPPTIN
TrEMBL top hitse value%identityAlignment
A0A6J1CZK4 uncharacterized protein LOC1110162283.9e-0837.04Show/hide
Query:  MSISFYL-LCLLCISFQAWQLQALHLADHKFHKELQAPIKGGLEK-VVVSWDKQTIESMKLSPPKIEEEEELV---------------------------
        MSISFYL L LL ISFQA   ++L  AD+K   +LQA ++G L + V++SW+K   E+MKLS  K  EE+                              
Subjt:  MSISFYL-LCLLCISFQAWQLQALHLADHKFHKELQAPIKGGLEK-VVVSWDKQTIESMKLSPPKIEEEEELV---------------------------

Query:  -----HDDHNNKVGRNDGVFSLDYVQPETHPPTIN
             H D + K+  N+GVF  DY    THPP+ N
Subjt:  -----HDDHNNKVGRNDGVFSLDYVQPETHPPTIN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATCTCTTTCTATCTTCTTTGTCTTCTTTGCATCTCATTTCAAGCATGGCAGCTCCAAGCTCTTCACTTAGCTGATCACAAATTTCACAAGGAACTTCAAGCTCC
CATTAAGGGAGGATTGGAGAAGGTAGTTGTTTCTTGGGATAAACAAACTATAGAATCCATGAAGTTATCACCTCCCAAGATTGAAGAGGAAGAAGAGTTGGTGCATGATG
ATCATAATAATAAAGTTGGAAGAAACGATGGCGTTTTCAGTTTAGATTATGTACAACCAGAAACTCATCCTCCTACTATCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATCTCTTTCTATCTTCTTTGTCTTCTTTGCATCTCATTTCAAGCATGGCAGCTCCAAGCTCTTCACTTAGCTGATCACAAATTTCACAAGGAACTTCAAGCTCC
CATTAAGGGAGGATTGGAGAAGGTAGTTGTTTCTTGGGATAAACAAACTATAGAATCCATGAAGTTATCACCTCCCAAGATTGAAGAGGAAGAAGAGTTGGTGCATGATG
ATCATAATAATAAAGTTGGAAGAAACGATGGCGTTTTCAGTTTAGATTATGTACAACCAGAAACTCATCCTCCTACTATCAACTAA
Protein sequenceShow/hide protein sequence
MSISFYLLCLLCISFQAWQLQALHLADHKFHKELQAPIKGGLEKVVVSWDKQTIESMKLSPPKIEEEEELVHDDHNNKVGRNDGVFSLDYVQPETHPPTIN