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Sed0026496 (gene) of Chayote v1 genome

Gene IDSed0026496
OrganismSechium edule (Chayote v1)
DescriptionCHCH domain-containing protein
Genome locationLG03:8834161..8836293
RNA-Seq ExpressionSed0026496
SyntenySed0026496
Gene Ontology termsGO:0007005 - mitochondrion organization (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR009069 - Cysteine alpha-hairpin motif superfamily
IPR010625 - CHCH


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444901.1 PREDICTED: uncharacterized protein C6C3.02c-like [Cucumis melo]2.2e-5987.59Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSA RPA RAP RNPPAPV+SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+ SSAPSVAN SGG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

XP_011649682.1 hemiasterlin resistant protein 1 [Cucumis sativus]2.6e-6088.97Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAPLRNPPAP S APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+ SSAPSVA+ SGG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

XP_022962551.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial [Cucurbita moschata]9.1e-6188.28Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAP RN PAP  SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+PSSAPSVA+  GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

XP_022997290.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Cucurbita maxima]1.5e-6088.28Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAP RN PAP +SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+PSSAPSVA   GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

XP_038886373.1 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Benincasa hispida]2.4e-6189.66Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAPLRNPPAP SSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+ SSAPSVAN  GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S ACTVQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

TrEMBL top hitse value%identityAlignment
A0A0A0LNY2 CHCH domain-containing protein1.3e-6088.97Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAPLRNPPAP S APPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHETVDSS+ SSAPSVA+ SGG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

A0A1S3BAZ1 uncharacterized protein C6C3.02c-like1.1e-5987.59Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSA RPA RAP RNPPAPV+SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPR IQHET+DSS+ SSAPSVAN SGG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

A0A6J1HDK4 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial4.4e-6188.28Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAP RN PAP  SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+PSSAPSVA+  GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

A0A6J1K966 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like7.5e-6188.28Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAP RN PAP +SAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSS+PSSAPSVA   GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S AC VQSK+F DCLNHYGSDI KCQFYLDML+ECR  SGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

A0A6J1KJW6 uncharacterized protein C6C3.02c-like1.4e-5986.9Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG
        MPRRSSGGRSASRPAPRAP+RNPP P  SAPPPAPVQGGGGGSMLGGLGATIAQG+AFGTGSAVAHRAVDAVMGPRVIQHE VDSS  SSA  +AN  GG
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGG

Query:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
        S  CTVQSKAF+DCLNHYG+DIGKCQFYLDMLKECR GSGSV+GA
Subjt:  SGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09570.1 Cox19-like CHCH family protein4.8e-3656.16Show/hide
Query:  MPRRSSGGRSASRPA-PRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG
        MPR SSGGRS+ RP+ P A    PP  V+ APPPA  Q   GGS LG +GA+I +G+A+GTG+A  HR VD+VMGPR  +HETV S  PS+A ++     
Subjt:  MPRRSSGGRSASRPA-PRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG

Query:  GSGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
           AC + SKAF DC+NH+GSDI KCQFY+DML EC+  SGSV+ A
Subjt:  GSGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

AT5G64400.1 CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625)4.5e-4264.38Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG
        M RRSSGGRSA RP P A     P PV  APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S S+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG

Query:  GSGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA
         S  C + +KAF DC+  YGS+I KCQFY+DML ECR  SGSV+GA
Subjt:  GSGACTVQSKAFDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA

AT5G64400.2 BEST Arabidopsis thaliana protein match is: Cox19-like CHCH family protein (TAIR:AT5G09570.1)9.1e-2763.16Show/hide
Query:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG
        M RRSSGGRSA RP P A     P PV  APPPAP Q  GGGG M  G+G+TIAQGMAFGTGSAVAHRAVD+VMGPR IQHE V+++S S+AP  A ++ 
Subjt:  MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQ-GGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSG

Query:  GSGACTVQSKAFDD
         S  C + +KAF D
Subjt:  GSGACTVQSKAFDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGTCGGAGCTCCGGTGGACGATCTGCTTCCCGTCCTGCACCTCGTGCTCCGCTACGCAATCCTCCGGCGCCAGTTAGTTCTGCTCCTCCACCCGCACCTGTACA
AGGTGGTGGAGGCGGGTCTATGCTGGGAGGACTTGGTGCCACTATTGCTCAAGGTATGGCCTTTGGTACTGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCTGTAATGG
GTCCTCGGGTCATCCAACACGAGACTGTTGATTCATCATCTCCGTCGTCAGCACCTTCAGTTGCGAACACTTCTGGAGGTTCTGGAGCTTGTACTGTTCAATCAAAGGCC
TTCGATGACTGCTTGAACCACTATGGAAGTGACATTGGCAAGTGCCAGTTCTACTTGGATATGTTGAAGGAATGCCGCAGCGGCTCAGGTTCTGTTATGGGCGCTTAA
mRNA sequenceShow/hide mRNA sequence
AAACAAGAAACCGCAAAACCCGATTAGTTGGACACCTATATAAACGACAAATAAGAGAAACCCCAAATAAACCTGCAACCCTAAATCGCAGATCTCATCCTCAAGACTCA
GCCACCGCCATTTCCATTTCCTTTCTTCGCGCCGTCGTCTCTTCTTACCGGCCGTAACCATGCCTCGTCGGAGCTCCGGTGGACGATCTGCTTCCCGTCCTGCACCTCGT
GCTCCGCTACGCAATCCTCCGGCGCCAGTTAGTTCTGCTCCTCCACCCGCACCTGTACAAGGTGGTGGAGGCGGGTCTATGCTGGGAGGACTTGGTGCCACTATTGCTCA
AGGTATGGCCTTTGGTACTGGAAGTGCAGTGGCTCACAGGGCTGTTGATGCTGTAATGGGTCCTCGGGTCATCCAACACGAGACTGTTGATTCATCATCTCCGTCGTCAG
CACCTTCAGTTGCGAACACTTCTGGAGGTTCTGGAGCTTGTACTGTTCAATCAAAGGCCTTCGATGACTGCTTGAACCACTATGGAAGTGACATTGGCAAGTGCCAGTTC
TACTTGGATATGTTGAAGGAATGCCGCAGCGGCTCAGGTTCTGTTATGGGCGCTTAAAATAATTGATTTTAGAATAATTTTATTTTCTCGCTCTGGGTCCATTTGGATGA
CCGCAGTTGAGCGGTGCCAAGATTATATGGTGTGTTGTGACTGTTTTTCATTTTACTAATACACTTTAATTAGAAGTGTTGAATGACGAAACACTTCACCGTTTGGACTC
TCTGTTGTTTTGTTTTAGTGTTTCCTCATGTAATCAAAACTGGTGTTTGGGTTATTTACTTGGTGAATGTTATTTGCAACCTATTAGATG
Protein sequenceShow/hide protein sequence
MPRRSSGGRSASRPAPRAPLRNPPAPVSSAPPPAPVQGGGGGSMLGGLGATIAQGMAFGTGSAVAHRAVDAVMGPRVIQHETVDSSSPSSAPSVANTSGGSGACTVQSKA
FDDCLNHYGSDIGKCQFYLDMLKECRSGSGSVMGA