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Sed0026530 (gene) of Chayote v1 genome

Gene IDSed0026530
OrganismSechium edule (Chayote v1)
DescriptionMYND-type domain-containing protein
Genome locationLG06:42229359..42231631
RNA-Seq ExpressionSed0026530
SyntenySed0026530
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR035204 - NADH-ubiquinone oxidoreductase 11kDa subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648679.1 hypothetical protein Csa_008887 [Cucumis sativus]2.7e-3987.5Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAEDLVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWS PLRPYGFWTF+RHNSQL+WD QISQV GRRDPYDD+LQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
XP_008446038.1 PREDICTED: uncharacterized protein LOC103488888 [Cucumis melo]2.4e-4092.05Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAEDLVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWSLPLRPYGFWTF+RHNSQL+WD QISQV GRRDPYDDLLQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
XP_011655561.1 uncharacterized protein LOC101213251 [Cucumis sativus]2.7e-3987.5Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAEDLVLRLMEDPKERDR+FREH+YA+KDRCQKTKEMWS PLRPYGFWTF+RHNSQL+WD QISQV GRRDPYDD+LQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
XP_022151828.1 uncharacterized protein LOC111019716 [Momordica charantia]2.0e-3988.64Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKF+MEFAE+LV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWS PLRPYGFWTFERHNSQLQWDAQISQ  GRRDPYDD+LQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
XP_038891434.1 uncharacterized protein LOC120080854 [Benincasa hispida]2.7e-3988.64Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKF+MEFAE+LVLRLMEDPKERDRKFREH+YAVKDRCQKTKEMWS PLRPYGFWTFERHNSQL+WDAQISQ  GRRDPYDD+LQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
TrEMBL top hitse value%identityAlignment
A0A1S3BE41 uncharacterized protein LOC1034888881.2e-4092.05Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAEDLVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWSLPLRPYGFWTF+RHNSQL+WD QISQV GRRDPYDDLLQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
A0A5A7SSK1 Uncharacterized protein1.2e-4092.05Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAEDLVLRLMEDPKERDR+FREHVYAVKDRCQKTKEMWSLPLRPYGFWTF+RHNSQL+WD QISQV GRRDPYDDLLQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
A0A6J1DD92 uncharacterized protein LOC1110197169.8e-4088.64Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKF+MEFAE+LV+RLMEDPKERDRKFREH+YAVKDRCQKTKEMWS PLRPYGFWTFERHNSQLQWDAQISQ  GRRDPYDD+LQD  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
A0A6J1GWE2 uncharacterized protein LOC1114581902.9e-3989.77Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAE+LVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWS P+RPYGFWTFERHN QL+WDAQISQV GRRDPYDDLL D  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
A0A6J1K907 uncharacterized protein LOC1114933472.9e-3989.77Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
        MKFIMEFAE+LVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWS P+RPYGFWTFERHN QL+WDAQISQV GRRDPYDDLL D  N
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G67350.1 unknown protein2.6e-3778.82Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQD
        M FIMEFAE+LVLRLME+P+ERDRK REH+Y + +RC+K KEMW+LP+RPYGFWTFERHN+QL+WD QISQVAGRRDPYDDLL+D
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQD
AT1G67350.2 unknown protein2.6e-3778.82Show/hide
Query:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQD
        M FIMEFAE+LVLRLME+P+ERDRK REH+Y + +RC+K KEMW+LP+RPYGFWTFERHN+QL+WD QISQVAGRRDPYDDLL+D
Subjt:  MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCATCATGGAGTTTGCTGAGGATTTGGTGTTGAGACTTATGGAGGATCCAAAAGAAAGGGATCGGAAATTCCGAGAGCACGTATACGCAGTGAAGGATCGGTG
CCAAAAGACGAAGGAGATGTGGAGCCTTCCGCTTCGTCCTTATGGATTTTGGACGTTTGAGCGCCACAATTCTCAGCTGCAGTGGGATGCACAAATCAGCCAGGTTGCTG
GTCGAAGGGATCCTTATGATGATCTGCTTCAGGACAAAACCAACTAA
mRNA sequenceShow/hide mRNA sequence
GTTTGTCCTTTGAGTTCATTTTTGCGAAGGTGATTGTGGAAGAAATCTTAAAACCTGCTAGCGATTTTCTGGAAGAAATAAGAAATGAAGTTCATCATGGAGTTTGCTGA
GGATTTGGTGTTGAGACTTATGGAGGATCCAAAAGAAAGGGATCGGAAATTCCGAGAGCACGTATACGCAGTGAAGGATCGGTGCCAAAAGACGAAGGAGATGTGGAGCC
TTCCGCTTCGTCCTTATGGATTTTGGACGTTTGAGCGCCACAATTCTCAGCTGCAGTGGGATGCACAAATCAGCCAGGTTGCTGGTCGAAGGGATCCTTATGATGATCTG
CTTCAGGACAAAACCAACTAATGATTTAAGAAGAATACTTGCAAGAGCTCCGAAATCGCTGGTGGAAACTGGGTAGCTCGAGCAATGGTTTGAACGCTCATTTGTTGTTG
TTTTAACTTCATGTGCTGTTTGAGCACTTAATGGTTTGAATTGTCAAACGAGATTTTGGTGCTGGAATAAACTTGCTTTTAAGATCATATTTCAAATTTGTGAATTTGAG
CACATTGCTTTTTACTTAATCGTATGCGTTTTGCATTACTTTTTTTTGTCCTCACCTCAAATTTCTTCTCATAGTTACTATTATCAGTTTTGTTACGAATTGCCATGTAA
CTAGTTACTATTATCCTCACTTACCAATTAACGC
Protein sequenceShow/hide protein sequence
MKFIMEFAEDLVLRLMEDPKERDRKFREHVYAVKDRCQKTKEMWSLPLRPYGFWTFERHNSQLQWDAQISQVAGRRDPYDDLLQDKTN