; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026534 (gene) of Chayote v1 genome

Gene IDSed0026534
OrganismSechium edule (Chayote v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationLG06:39750367..39751206
RNA-Seq ExpressionSed0026534
SyntenySed0026534
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604930.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-8760.15Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   R P G+N  IR+VWAYN + E+  LD CL S++++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  F++ +R++ I RWITFHGLYDIGYL+ AMG+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K +
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK

KAG7027009.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-8760.53Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   R P G+N  IR+VWAYN + E+  LD CL S++++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I RWITFHGLYDIGYL+ AMG+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K +
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK

XP_022947868.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.4e-8659.77Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   R P G+N  IR+VWAYN + E+  LD CL S++I+SIDTEFPG I  TPW + DE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ + ++ I RW+TFHGLYDIGYL+ AMG+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K +
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.2e-8857.6Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   R P G+N  IR+VWAYN + E+  LD CL S++++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I RW+TFHGLYDIGYL+ AMG+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K  +++ +QT  +     C+
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]2.8e-9059.35Show/hide
Query:  IRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISF
        I +VWA NF++E+S L+ CL  HTI+SIDTEFPG I  +PW SIDE LYEDF+FNVN TK+IQLGLTA D+ G +GGSWEFNFSDFD   D  +P+S SF
Subjt:  IRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISF

Query:  LIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQ----GKLGLRKL
        L +NG+DF +LK+ GI + +F   F+HI+R++ + RW+TFHGLYDIGYLI+AMGI E LP +M EFAT++V  +GIVRDLK MARFC+    GKLGL +L
Subjt:  LIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQ----GKLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDM-------------QTPAVTPLY
        GKLL Q R+ LKH+AGS+SLLTA  H +M Q +D+  +ICDG+LYGFSNKL+ MD+             Q P   PLY
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDM-------------QTPAVTPLY

TrEMBL top hitse value%identityAlignment
A0A6J1G7T4 Poly(A)-specific ribonuclease1.2e-8659.77Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   R P G+N  IR+VWAYN + E+  LD CL S++I+SIDTEFPG I  TPW + DE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ + ++ I RW+TFHGLYDIGYL+ AMG+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K +
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLK

A0A6J1I1E6 putative CCR4-associated factor 1 homolog 81.3e-8556.18Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   + P G+N  I +VWAYN + E+  LD+CL  + ++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQL +T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I +WITFHGLYDIGYLI A+G+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K  +++ MQ+  +     C+
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS

A0A6J1I3Q4 Poly(A)-specific ribonuclease3.4e-8656.18Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   + P G+N  I +VWAYN + E+  LD+CL  + ++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I +WITFHGLYDIGYLI A+G+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+T L+H KM Q YD   +ICDGFLYG S K  +++ MQ+  +     C+
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS

A0A6J1I4S7 Poly(A)-specific ribonuclease1.5e-8656.54Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   + P G+N  I +VWAYN + E+  LD+CL  + ++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G +GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I +WITFHGLYDIGYLI A+G+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K  +++ MQ+  +     C+
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS

A0A6J1I6H7 Poly(A)-specific ribonuclease1.2e-8656.54Show/hide
Query:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF
        MD   + P G+N  I +VWAYN + E+  LD+CL  + ++SIDTEFPG I  TPW +IDE+LY DF+FNVN TK+IQLG+T  DE G++GG+WEFNFSDF
Subjt:  MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDF

Query:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF
        D   D +NPASI FL +NG+DF +LK++GI +R FA  FL+ +R++ I +WITFHGLYDIGYLI A+G+V+ LP ++ EF  I+   VG VRDLK MARF
Subjt:  DLTTDYYNPASISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARF

Query:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS
        C+    G LGL KLG+LL Q RF LKHHAGS+SL+TAL+H KM Q YD   +ICDGFLYG S K  +++ MQ+  +     C+
Subjt:  CQ----GKLGLRKLGKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKL-KYMDMQTPAVTPLYLCS

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.1e-3637.28Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N ++EM+ + +CL+    ++IDTEFPG +  TP  + DE  Y D +FNV++T +IQLGLT   +   +  +WE N SDF+ +    N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIV-RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKLG
         NG+D ++++ EGI +  F   F  I+  ++   RW+TF G YD  YL++ +   + LP +  EF   +   +G  V D+K MA  C G   + GL+++ 
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIV-RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKLG

Query:  KLLGQNRFELKHHAGSNSLLTALIHLKM
         +L   R    HHAGS+S LTA +  K+
Subjt:  KLLGQNRFELKHHAGSNSLLTALIHLKM

Q9C6M9 Putative CCR4-associated factor 1 homolog 47.7e-3536.68Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N E EM  + +CL+  + ++IDTEFPG +  TP  + +E  Y D +FNV++T +IQLG T  D  G +  +WE N SDF+    + N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIVRR--NKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL
         NG++ +++  EGI +  F  +F  I++    KI+ W+ F G YD  YL++ +   + LP +  EF   +   +G  V D+K +A  C G   + GL+++
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIVRR--NKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKM
          +L   R    HHAGS+S LTA +  K+
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKM

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.7e-4041.47Show/hide
Query:  MSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLIENGIDFERLK
        MS +++CLRS+  ++IDTEFP  +  T   + DE+ Y D  F+V+  K+IQLGLT  D  G +GG+WE NFSDF +  D  N  SI FL  NG+D  +++
Subjt:  MSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLIENGIDFERLK

Query:  REGIWMRVFAGNFLHIVRRNKIS-RWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKLGKLLGQNRFELK
         EGI +  F      ++++ + +  W+TFHG YDI YL++     E LP +   F+  +   +G V DLK MA  C+G   +LGL  L    G NR    
Subjt:  REGIWMRVFAGNFLHIVRRNKIS-RWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKLGKLLGQNRFELK

Query:  HHAGSNSLLTALIHLKM
        HHAGSN+ LTA++  K+
Subjt:  HHAGSNSLLTALIHLKM

Q9SFX6 Putative CCR4-associated factor 1 homolog 35.9e-3537.12Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N E EM+ + +CL+  + ++IDTEFPG +  TP  + +E  Y D +FNV++T +IQLG T  D  G    +WE N SDFD    + N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIV--RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL
         NG++ ++++ EGI +  F  +F  I+  +  KI+ W+ F G YD  YL++ +   + LP +  EF   +   +G  V D+K +A  C G   + GL+++
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIV--RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKM
          +L   R    HHAGS+S LTA +  K+
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKM

Q9SHJ0 Probable CCR4-associated factor 1 homolog 11.0e-4236.88Show/hide
Query:  RQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFL
        R+VW  N + EM+ +  CL+   +++ DTE+PG+I  T + S  ++ Y   + NV +TK+IQ G T  +  G +GG WE NFS+F   +D  N  SI FL
Subjt:  RQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFL

Query:  IENGIDFERLKREGIWM--RVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKL
          +G+D ++++ EG+ M    F    + + R  K   ++TF G YD  Y +  +    +LP +  EFAT +V   G V D K MA FC+G    LGL KL
Subjt:  IENGIDFERLKREGIWM--RVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDMQTPAVTP
         +LL   R    HHAGS+SL+TAL+ +K++  Y+   +   G +YG   K   +    PA  P
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDMQTPAVTP

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.1e-4436.88Show/hide
Query:  RQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFL
        R+VW  N + EM+ +  CL+   +++ DTE+PG+I  T + S  ++ Y   + NV +TK+IQ G T  +  G +GG WE NFS+F   +D  N  SI FL
Subjt:  RQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFL

Query:  IENGIDFERLKREGIWM--RVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKL
          +G+D ++++ EG+ M    F    + + R  K   ++TF G YD  Y +  +    +LP +  EFAT +V   G V D K MA FC+G    LGL KL
Subjt:  IENGIDFERLKREGIWM--RVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDMQTPAVTP
         +LL   R    HHAGS+SL+TAL+ +K++  Y+   +   G +YG   K   +    PA  P
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDMQTPAVTP

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.2e-3637.12Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N E EM+ + +CL+  + ++IDTEFPG +  TP  + +E  Y D +FNV++T +IQLG T  D  G    +WE N SDFD    + N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIV--RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL
         NG++ ++++ EGI +  F  +F  I+  +  KI+ W+ F G YD  YL++ +   + LP +  EF   +   +G  V D+K +A  C G   + GL+++
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIV--RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKM
          +L   R    HHAGS+S LTA +  K+
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKM

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.4e-3636.68Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N E EM  + +CL+  + ++IDTEFPG +  TP  + +E  Y D +FNV++T +IQLG T  D  G +  +WE N SDF+    + N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIVRR--NKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL
         NG++ +++  EGI +  F  +F  I++    KI+ W+ F G YD  YL++ +   + LP +  EF   +   +G  V D+K +A  C G   + GL+++
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIVRR--NKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKL

Query:  GKLLGQNRFELKHHAGSNSLLTALIHLKM
          +L   R    HHAGS+S LTA +  K+
Subjt:  GKLLGQNRFELKHHAGSNSLLTALIHLKM

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.9e-3737.28Show/hide
Query:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI
        +VW +N ++EM+ + +CL+    ++IDTEFPG +  TP  + DE  Y D +FNV++T +IQLGLT   +   +  +WE N SDF+ +    N  SI+FL 
Subjt:  QVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLI

Query:  ENGIDFERLKREGIWMRVFAGNFLHIV-RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKLG
         NG+D ++++ EGI +  F   F  I+  ++   RW+TF G YD  YL++ +   + LP +  EF   +   +G  V D+K MA  C G   + GL+++ 
Subjt:  ENGIDFERLKREGIWMRVFAGNFLHIV-RRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVG-IVRDLKCMARFCQG---KLGLRKLG

Query:  KLLGQNRFELKHHAGSNSLLTALIHLKM
         +L   R    HHAGS+S LTA +  K+
Subjt:  KLLGQNRFELKHHAGSNSLLTALIHLKM

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-4141.47Show/hide
Query:  MSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLIENGIDFERLK
        MS +++CLRS+  ++IDTEFP  +  T   + DE+ Y D  F+V+  K+IQLGLT  D  G +GG+WE NFSDF +  D  N  SI FL  NG+D  +++
Subjt:  MSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPASISFLIENGIDFERLK

Query:  REGIWMRVFAGNFLHIVRRNKIS-RWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKLGKLLGQNRFELK
         EGI +  F      ++++ + +  W+TFHG YDI YL++     E LP +   F+  +   +G V DLK MA  C+G   +LGL  L    G NR    
Subjt:  REGIWMRVFAGNFLHIVRRNKIS-RWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQG---KLGLRKLGKLLGQNRFELK

Query:  HHAGSNSLLTALIHLKM
        HHAGSN+ LTA++  K+
Subjt:  HHAGSNSLLTALIHLKM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAGAAATCGAAACCCGAGTGGCGAAAACGATAAAATTCGACAAGTTTGGGCATACAATTTCGAGTCGGAAATGTCACATCTCGATAACTGCCTTCGATCTCA
CACTATCCTTTCCATTGACACTGAATTTCCAGGATTGATTATGACCACCCCTTGGATCTCCATCGATGAACAACTCTATGAAGACTTTCAATTCAATGTTAACCACACCA
AAATGATTCAACTAGGGTTGACAGCTGTGGATGAATGGGGAAGCGTCGGCGGTTCATGGGAGTTCAACTTCTCCGACTTCGATCTAACGACCGACTACTACAACCCCGCC
TCGATTTCATTCTTGATAGAGAACGGGATAGATTTCGAGAGGCTGAAAAGAGAAGGAATTTGGATGAGAGTATTTGCAGGAAACTTCTTACACATTGTCCGAAGGAATAA
AATTTCCAGATGGATCACATTCCATGGACTATACGATATCGGGTATCTTATACAAGCGATGGGCATAGTGGAGAGATTGCCGAGGTCAATGTACGAATTCGCTACGATAA
TTGTAAACGAAGTGGGGATCGTGAGAGACTTGAAGTGTATGGCGAGATTCTGCCAAGGGAAGTTAGGACTCCGAAAACTGGGCAAACTGCTCGGCCAAAATCGGTTCGAA
TTAAAGCACCATGCGGGTTCGAACAGTTTGTTGACGGCATTAATTCACCTAAAGATGGAGCAATGCTATGATCTTGGTCCACAAATTTGTGATGGGTTTTTGTATGGATT
TTCCAATAAACTGAAGTACATGGACATGCAAACTCCTGCTGTTACGCCCCTTTATTTATGCTCCTTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAGAAATCGAAACCCGAGTGGCGAAAACGATAAAATTCGACAAGTTTGGGCATACAATTTCGAGTCGGAAATGTCACATCTCGATAACTGCCTTCGATCTCA
CACTATCCTTTCCATTGACACTGAATTTCCAGGATTGATTATGACCACCCCTTGGATCTCCATCGATGAACAACTCTATGAAGACTTTCAATTCAATGTTAACCACACCA
AAATGATTCAACTAGGGTTGACAGCTGTGGATGAATGGGGAAGCGTCGGCGGTTCATGGGAGTTCAACTTCTCCGACTTCGATCTAACGACCGACTACTACAACCCCGCC
TCGATTTCATTCTTGATAGAGAACGGGATAGATTTCGAGAGGCTGAAAAGAGAAGGAATTTGGATGAGAGTATTTGCAGGAAACTTCTTACACATTGTCCGAAGGAATAA
AATTTCCAGATGGATCACATTCCATGGACTATACGATATCGGGTATCTTATACAAGCGATGGGCATAGTGGAGAGATTGCCGAGGTCAATGTACGAATTCGCTACGATAA
TTGTAAACGAAGTGGGGATCGTGAGAGACTTGAAGTGTATGGCGAGATTCTGCCAAGGGAAGTTAGGACTCCGAAAACTGGGCAAACTGCTCGGCCAAAATCGGTTCGAA
TTAAAGCACCATGCGGGTTCGAACAGTTTGTTGACGGCATTAATTCACCTAAAGATGGAGCAATGCTATGATCTTGGTCCACAAATTTGTGATGGGTTTTTGTATGGATT
TTCCAATAAACTGAAGTACATGGACATGCAAACTCCTGCTGTTACGCCCCTTTATTTATGCTCCTTATAG
Protein sequenceShow/hide protein sequence
MDGRNRNPSGENDKIRQVWAYNFESEMSHLDNCLRSHTILSIDTEFPGLIMTTPWISIDEQLYEDFQFNVNHTKMIQLGLTAVDEWGSVGGSWEFNFSDFDLTTDYYNPA
SISFLIENGIDFERLKREGIWMRVFAGNFLHIVRRNKISRWITFHGLYDIGYLIQAMGIVERLPRSMYEFATIIVNEVGIVRDLKCMARFCQGKLGLRKLGKLLGQNRFE
LKHHAGSNSLLTALIHLKMEQCYDLGPQICDGFLYGFSNKLKYMDMQTPAVTPLYLCSL