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Sed0026571 (gene) of Chayote v1 genome

Gene IDSed0026571
OrganismSechium edule (Chayote v1)
DescriptionSquamosa-promoter binding-like protein
Genome locationLG05:32781958..32782239
RNA-Seq ExpressionSed0026571
SyntenySed0026571
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022956.1 Squamosa promoter-binding-like protein 4 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

XP_022930778.1 squamosa promoter-binding protein 1-like [Cucurbita moschata]4.2e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

XP_022989218.1 squamosa promoter-binding protein 1-like [Cucurbita maxima]4.2e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

XP_023531078.1 squamosa promoter-binding protein 1-like [Cucurbita pepo subsp. pepo]4.2e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

XP_038888920.1 squamosa promoter-binding protein 1-like [Benincasa hispida]1.9e-2770.65Show/hide
Query:  MEKDTVKEEAE-GEYDEDKKRKSIIVGGGG---------GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME + VK+E E GEYD+DKKRK I++GGGG         GG RCCQAE C+ADL+E K YHRRHKVCEVHAKSQVV+VGGF+QRFCQQCSRF
Subjt:  MEKDTVKEEAE-GEYDEDKKRKSIIVGGGG---------GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

TrEMBL top hitse value%identityAlignment
A0A2I4E643 squamosa promoter-binding protein 1-like1.3e-2161.8Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGG-------GTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ++K+ V+ + E E  E++KRK  ++ GGGG       G RCCQAE C ADLS+ KQYHRRHKVCE HAK+QVV+VGG RQRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGG-------GTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

A0A2P5AE61 SBP-box transcription factor2.8e-2163.53Show/hide
Query:  KEEAEGEYDEDKKRKSII------VGGGG---GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        +EE EG   EDK++K ++       GGGG   GG RCCQAE C  DLS+ KQYHRRHKVCE+HAK+QVV+V G RQRFCQQCSRF
Subjt:  KEEAEGEYDEDKKRKSII------VGGGG---GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

A0A6J1EWC3 squamosa promoter-binding protein 1-like2.0e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

A0A6J1JPM8 squamosa promoter-binding protein 1-like2.0e-2769.39Show/hide
Query:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        MEK  VKE     + +GEYDEDKKRK +IV            GGGGG RCCQAE C ADLSE K YHRRHKVCEVHAKSQVV+VGGFRQRFCQQCSRF
Subjt:  MEKDTVKE-----EAEGEYDEDKKRKSIIV-----------GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

A0A6P3Z3U5 squamosa promoter-binding protein 1-like1.8e-2363.44Show/hide
Query:  KEEAEGEY------DEDKKRKSIIVGGGG-----------GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        KEE + EY      +EDKKRK ++ GGGG           GG RCCQAE C ADL++ KQYHRRHKVCE+HAK+QVVVVGG RQRFCQQCSRF
Subjt:  KEEAEGEY------DEDKKRKSIIVGGGG-----------GGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

SwissProt top hitse value%identityAlignment
Q2R3Y1 Putative squamosa promoter-binding-like protein 194.1e-1766.67Show/hide
Query:  GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        GGGGGG   C  + C +DLS  + YHRRHKVCE HAK+ VVVV G  QRFCQQCSRF
Subjt:  GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

Q38741 Squamosa promoter-binding protein 11.7e-1551.28Show/hide
Query:  EAEGEYDEDKKRKSIIVGGG----GGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        E E +  ED K+   +   G    G   R CQ ENC A+++  K YHRRHKVCE HAK+ VV+  G +QRFCQQCSRF
Subjt:  EAEGEYDEDKKRKSIIVGGG----GGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

Q75LH6 Squamosa promoter-binding-like protein 62.0e-1657.75Show/hide
Query:  GEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        G  +ED+  K I V GG      CQ E C ADL+ V+ YHRRHKVCE+HAK+   VVG   QRFCQQCSRF
Subjt:  GEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

Q9S7A9 Squamosa promoter-binding-like protein 44.5e-1654.88Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME DT +EE   E   D+ R S      GG  R CQ + C AD+ E K YHRRHKVCEVHAK+  V + G  QRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

Q9S7P5 Squamosa promoter-binding-like protein 129.1e-1747.96Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGG------------GGG----TRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME+D +K       D+D  R ++ +GG             GGG      CCQ +NC ADLS+VK YHRRHKVCE+H+K+   +VGG  QRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGG------------GGG----TRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

Arabidopsis top hitse value%identityAlignment
AT1G53160.1 squamosa promoter binding protein-like 43.2e-1754.88Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME DT +EE   E   D+ R S      GG  R CQ + C AD+ E K YHRRHKVCEVHAK+  V + G  QRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

AT1G53160.2 squamosa promoter binding protein-like 43.2e-1754.88Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME DT +EE   E   D+ R S      GG  R CQ + C AD+ E K YHRRHKVCEVHAK+  V + G  QRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

AT1G76580.1 Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein3.6e-1664.91Show/hide
Query:  GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        GGGGG    CQ +NC  DLS  K YHRRHKVCEVH+K+   +VG   QRFCQQCSRF
Subjt:  GGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

AT2G47070.1 squamosa promoter binding protein-like 12.7e-1647.13Show/hide
Query:  DKKRKSIIVGGGGGGT---------------------RCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        DKKR+++ + G   G                        CQ ENC ADLS+VK YHRRHKVCE+H+K+    VGG  QRFCQQCSRF
Subjt:  DKKRKSIIVGGGGGGT---------------------RCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF

AT3G60030.1 squamosa promoter-binding protein-like 126.5e-1847.96Show/hide
Query:  MEKDTVKEEAEGEYDEDKKRKSIIVGGG------------GGG----TRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF
        ME+D +K       D+D  R ++ +GG             GGG      CCQ +NC ADLS+VK YHRRHKVCE+H+K+   +VGG  QRFCQQCSRF
Subjt:  MEKDTVKEEAEGEYDEDKKRKSIIVGGG------------GGG----TRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGACACGGTGAAGGAGGAGGCTGAGGGAGAATATGATGAGGACAAGAAGAGGAAGAGTATAATCGTCGGTGGTGGCGGCGGAGGAACTCGGTGTTGTCAAGC
TGAGAACTGTATGGCTGATTTGAGTGAAGTCAAACAGTATCATAGGAGGCATAAGGTCTGTGAGGTTCATGCCAAATCTCAAGTTGTGGTTGTTGGTGGGTTCAGGCAGA
GATTTTGTCAGCAATGTAGCAGGTTTGGAACCAAACAACTTTGGTTTTTTTTTACTTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGACACGGTGAAGGAGGAGGCTGAGGGAGAATATGATGAGGACAAGAAGAGGAAGAGTATAATCGTCGGTGGTGGCGGCGGAGGAACTCGGTGTTGTCAAGC
TGAGAACTGTATGGCTGATTTGAGTGAAGTCAAACAGTATCATAGGAGGCATAAGGTCTGTGAGGTTCATGCCAAATCTCAAGTTGTGGTTGTTGGTGGGTTCAGGCAGA
GATTTTGTCAGCAATGTAGCAGGTTTGGAACCAAACAACTTTGGTTTTTTTTTACTTTTTGA
Protein sequenceShow/hide protein sequence
MEKDTVKEEAEGEYDEDKKRKSIIVGGGGGGTRCCQAENCMADLSEVKQYHRRHKVCEVHAKSQVVVVGGFRQRFCQQCSRFGTKQLWFFFTF