; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026599 (gene) of Chayote v1 genome

Gene IDSed0026599
OrganismSechium edule (Chayote v1)
DescriptionTLC domain-containing protein 2
Genome locationLG01:43240929..43268118
RNA-Seq ExpressionSed0026599
SyntenySed0026599
Gene Ontology termsGO:0007009 - plasma membrane organization (biological process)
GO:0055091 - phospholipid homeostasis (biological process)
GO:0071709 - membrane assembly (biological process)
GO:0097035 - regulation of membrane lipid distribution (biological process)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR006634 - TRAM/LAG1/CLN8 homology domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141651.1 TLC domain-containing protein 2 isoform X1 [Momordica charantia]4.7e-8389.71Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QLVGGTW  AYAALCFSCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKS 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR
        +VKVEWILNW TF+FAR+VPHILITAKLVVDASKF +GVELPLAL GMAGMNLLNAFLGIDL+NAV+KES Y+KR
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR

XP_022141652.1 TLC domain-containing protein 2 isoform X2 [Momordica charantia]4.7e-8389.71Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QLVGGTW  AYAALCFSCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKS 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR
        +VKVEWILNW TF+FAR+VPHILITAKLVVDASKF +GVELPLAL GMAGMNLLNAFLGIDL+NAV+KES Y+KR
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR

XP_022939854.1 TLC domain-containing protein 2 [Cucurbita moschata]5.6e-8490.23Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDA+SF
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEW LNW TF FAR VPHILITAKL++DASKF KGVELPLAL GMA MNLLN FLGIDL NAV+KESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

XP_022992953.1 TLC domain-containing protein 2 [Cucurbita maxima]1.5e-8490.8Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDA+SF
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEW LNW TFIFAR VPHILITAKL++DASKF KGVELPLAL GMA MNLLN FLGIDL NAV+KESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

XP_023550889.1 TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo]1.5e-8490.8Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDA+SF
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEW LNW TFIFAR VPHILITAKL++DASKF KGVELPLAL GMA MNLLN FLGIDL NAV+KESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

TrEMBL top hitse value%identityAlignment
A0A5A7V090 TLC domain-containing protein 25.1e-8387.93Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTL+CE+HSIFLHVRRLRRMAGVRDAKS 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEWILNW TF+FAR VPHILIT KL++DA KF KGVELPLAL GM GMNLLNA LGIDL+NAVRKESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

A0A6J1CJV1 TLC domain-containing protein 2 isoform X12.3e-8389.71Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QLVGGTW  AYAALCFSCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKS 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR
        +VKVEWILNW TF+FAR+VPHILITAKLVVDASKF +GVELPLAL GMAGMNLLNAFLGIDL+NAV+KES Y+KR
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR

A0A6J1CKF5 TLC domain-containing protein 2 isoform X22.3e-8389.71Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QLVGGTW  AYAALCFSCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKS 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR
        +VKVEWILNW TF+FAR+VPHILITAKLVVDASKF +GVELPLAL GMAGMNLLNAFLGIDL+NAV+KES Y+KR
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKR

A0A6J1FID3 TLC domain-containing protein 22.7e-8490.23Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDA+SF
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEW LNW TF FAR VPHILITAKL++DASKF KGVELPLAL GMA MNLLN FLGIDL NAV+KESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

A0A6J1K0R9 TLC domain-containing protein 27.1e-8590.8Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MFEH+QL GGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALY+NVTINYLILTLICELHSIFLHVRRLRRMAGVRDA+SF
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK
        IVKVEW LNW TFIFAR VPHILITAKL++DASKF KGVELPLAL GMA MNLLN FLGIDL NAV+KESNY+K
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRK

SwissProt top hitse value%identityAlignment
A6NGC4 TLC domain-containing protein 24.6e-0431.25Show/hide
Query:  WAYAALCFSCGYFAYDQWDML-QYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWST
        WA   +  S GYF  D  D+L    L   W   +L HHLV++ C + A+     + + +++L+ EL+S  LH+R+L  ++  R A S    V    + +T
Subjt:  WAYAALCFSCGYFAYDQWDML-QYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWST

Query:  FIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNL-----LNAFLGID-LVNAV
            RLVP   ++  L      F +  ++PLAL+ + G+ L     ++  LGI  LVN V
Subjt:  FIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNL-----LNAFLGID-LVNAV

A8WGS4 TLC domain-containing protein 22.8e-0928.16Show/hide
Query:  WAYAALCFSCGYFAYDQWDM-LQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWST
        +++A +  S GYF YD  DM +  ++   W   +L HH+V++ CF +++     + + ++ L+ E++S+FLH+R++ RMA +  AKS   +V  ++N  T
Subjt:  WAYAALCFSCGYFAYDQWDM-LQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWST

Query:  FIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNA----VRKESNYRKRYEEDKDM
        ++  R+     +T  LV++           +  +G+A M  +N  L   L+ +      +E   RK  E++KDM
Subjt:  FIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNA----VRKESNYRKRYEEDKDM

Q8VC26 TLC domain-containing protein 27.0e-0531.43Show/hide
Query:  PWAYAALCFSCGYFAYDQWDML-QYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWS
        PWA   +  S GYFA D  DML    L   W   +L HHL ++ C + A+     + + +++L+ EL+SI LH+R+L  ++    A S   +V    + +
Subjt:  PWAYAALCFSCGYFAYDQWDML-QYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNWS

Query:  TFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGM
        T +  RL+P   ++  L    S+    + L L LL +AG+
Subjt:  TFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGM

Arabidopsis top hitse value%identityAlignment
AT1G21790.1 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein1.1e-7775.71Show/hide
Query:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF
        MF+H++LVGGTW WAY ALCFSCGYFAYDQWDMLQYRLYSG IP+ILVHHLVLL+CFTLALY+NVTINYLILTLICE+HSIFLHVR+LRRMAG+RD+ + 
Subjt:  MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSF

Query:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKRYE
        +VK+EW+LNW+ F+FAR +PHILIT KL+ DA KFGKGVELPLAL GMAGMN+LN  LG+DL +A R+E ++R+  E
Subjt:  IVKVEWILNWSTFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKRYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAGCATACACAATTGGTTGGAGGAACATGGCCGTGGGCCTATGCCGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCAATACCG
ATTATACAGTGGCTGGATCCCTGCAATCTTGGTTCATCATCTGGTTCTTCTCATTTGCTTTACGCTTGCTTTGTACAAGAATGTCACCATCAATTATCTCATTCTCACTC
TCATTTGCGAGCTGCATTCCATCTTTCTCCACGTGAGGCGATTGCGAAGGATGGCTGGTGTTCGTGACGCCAAGAGCTTTATCGTGAAGGTTGAATGGATTCTAAACTGG
TCAACCTTCATTTTTGCAAGGTTGGTACCACACATTCTCATTACTGCTAAGCTCGTCGTGGATGCTTCTAAGTTTGGTAAAGGCGTAGAGCTTCCGCTTGCACTGCTTGG
GATGGCTGGCATGAACTTGCTGAATGCTTTTCTTGGCATTGATCTCGTAAATGCTGTAAGGAAAGAGAGTAATTACAGGAAAAGATATGAAGAAGATAAAGATATGTAG
mRNA sequenceShow/hide mRNA sequence
CTCCATTATCACCTCTTCTTCAGGATGTGGAATCGGGGAAGACGATTGTGATCTTGAACTCTGTTCCGGACTCTACATTCTCACTCTTGCTCAAGTGCTATTTGTTTTGG
TGAATCGGTGGCTGAGTAATGGTTCAGAAGGGATGTTTGAGCATACACAATTGGTTGGAGGAACATGGCCGTGGGCCTATGCCGCTTTGTGCTTCTCATGTGGTTATTTT
GCGTATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCAATCTTGGTTCATCATCTGGTTCTTCTCATTTGCTTTACGCTTGCTTTGTACAA
GAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGCTGCATTCCATCTTTCTCCACGTGAGGCGATTGCGAAGGATGGCTGGTGTTCGTGACGCCAAGAGCT
TTATCGTGAAGGTTGAATGGATTCTAAACTGGTCAACCTTCATTTTTGCAAGGTTGGTACCACACATTCTCATTACTGCTAAGCTCGTCGTGGATGCTTCTAAGTTTGGT
AAAGGCGTAGAGCTTCCGCTTGCACTGCTTGGGATGGCTGGCATGAACTTGCTGAATGCTTTTCTTGGCATTGATCTCGTAAATGCTGTAAGGAAAGAGAGTAATTACAG
GAAAAGATATGAAGAAGATAAAGATATGTAG
Protein sequenceShow/hide protein sequence
MFEHTQLVGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYKNVTINYLILTLICELHSIFLHVRRLRRMAGVRDAKSFIVKVEWILNW
STFIFARLVPHILITAKLVVDASKFGKGVELPLALLGMAGMNLLNAFLGIDLVNAVRKESNYRKRYEEDKDM