CuGenDBv2

Gene ID	Sed0026603
Organism	Sechium edule (Chayote v1)
Description	dapper homolog 3 isoform X1
Genome location	LG08:6030735..6036741
RNA-Seq Expression	Sed0026603
Synteny	Sed0026603
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003712 - transcription coregulator activity (molecular function) GO:0003723 - RNA binding (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR001876 - Zinc finger, RanBP2-type IPR034870 - TAF15/EWS/TLS family IPR036443 - Zinc finger, RanBP2-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6589926.1 Zinc finger Ran-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-180

71.15

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                     PPLSLL
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL

Query:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

XP_022961315.1 uncharacterized protein LOC111461847 isoform X2 [Cucurbita moschata]

4.6e-180

71.15

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                     PPLSLL
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL

Query:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

XP_022961316.1 uncharacterized protein LOC111461847 isoform X3 [Cucurbita moschata]

4.6e-180

71.15

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                     PPLSLL
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL

Query:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

XP_022961321.1 uncharacterized protein LOC111461847 isoform X6 [Cucurbita moschata]

2.2e-182

74.33

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS-PPLSLLPQRGRWAHDIRERSRSPIRG
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S PPLSLLPQRGRWA D+RERSRSPIRG
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS-PPLSLLPQRGRWAHDIRERSRSPIRG

Query:  PVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

XP_022961322.1 uncharacterized protein LOC111461847 isoform X7 [Cucurbita moschata]

2.4e-184

74.5

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRSPIRGP
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRPP PPLSLLPQRGRWA D+RERSRSPIRGP
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRSPIRGP

Query:  VRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        VRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  VRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

TrEMBL top hits

e value

%identity

Alignment

A0A6J1H9W7 uncharacterized protein LOC111461847 isoform X7

1.1e-184

74.5

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRSPIRGP
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRPP PPLSLLPQRGRWA D+RERSRSPIRGP
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRSPIRGP

Query:  VRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        VRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  VRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

A0A6J1HA13 uncharacterized protein LOC111461847 isoform X3

2.2e-180

71.15

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                     PPLSLL
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL

Query:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

A0A6J1HA20 uncharacterized protein LOC111461847 isoform X6

1.1e-182

74.33

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS-PPLSLLPQRGRWAHDIRERSRSPIRG
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S PPLSLLPQRGRWA D+RERSRSPIRG
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS-PPLSLLPQRGRWAHDIRERSRSPIRG

Query:  PVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

A0A6J1HBT6 uncharacterized protein LOC111461847 isoform X2

2.2e-180

71.15

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                     PPLSLL
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------PPLSLL

Query:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
        PQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  PQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

A0A6J1HDP1 uncharacterized protein LOC111461847 isoform X1

3.2e-179

69.67

Show/hide

Query:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL
        MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGG SGGRV RG+DYEAGEVPRD PPQY RLDRYS DLGYR+HAGS SPTRRRDDHRYISDFDHS GL
Subjt:  MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGL

Query:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG
        TRGREFGGG+DLGR RDTSPHYSRR+SGGRP GRG DG   APGP R ERSKNNPNVRPR+GDWYCSDPLCDNLNFARR+FCNNCN+PRTG         
Subjt:  TRGREFGGGKDLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDR-ERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAG

Query:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD
                                                           AGGSPRR GY G  SLHSPPRR AAHPIERSPGR++N YRSPPR WARD
Subjt:  YPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARD

Query:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------------
        GPR+IAA  LAP RYESRYSDH+LR DRV+YLEDSF+GRSKFDR  P+DW+L D+GRDDFI ERKGFERRP S                           
Subjt:  GPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPS---------------------------

Query:  ----PPLSLLPQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF
            PPLSLLPQRGRWA D+RERSRSPIRGPVRSPLRV LRSPLSGGLPPKD+RRDVFVERERDDRRGLGR+RDGGPF
Subjt:  ----PPLSLLPQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRERDGGPF

SwissProt top hits

e value

%identity

Alignment

Q92804 TATA-binding protein-associated factor 2N

7.0e-06

39.26

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Query:  GRGVDGARFAPGPDRERSK-NNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPR----TGAGGSPRRAGYPGGSPRRAGYAGGSPRRAGYAGGSPRR
        G G  G R   G  R R         P+ GDW C +P C N+NFARR+ CN CN+PR      +GG  R  GY GG     G  G    R GY GG    
Subjt:  GRGVDGARFAPGPDRERSK-NNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPR----TGAGGSPRRAGYPGGSPRRAGYAGGSPRRAGYAGGSPRR

Query:  AGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAG
         GY G      GY+G   R  G  GG     GY G
Subjt:  AGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAG

Arabidopsis top hits

e value

%identity

Alignment

AT4G28990.1 RNA-binding protein-related

3.1e-49

36.34

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Query:  MGSRDKDSTT-HHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADL-GYRLHAGSASPTRR-RDDHRYISDFDHS
        MGS +K+ TT HH P +SSLVVR S S+           GR A G DYE GEV RD  P + R DRY  D  G+R  A S+SP RR  +DH++ SD +HS
Subjt:  MGSRDKDSTT-HHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADL-GYRLHAGSASPTRR-RDDHRYISDFDHS

Query:  GGLTRGREFGGGKDL-GRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDRERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPR
        G   RGRE    ++  GR RD SP  +R  +G RP  RG+DG     G D     N   V+PREGDWYC DPLC NLNFARR+ C  C + R     SP 
Subjt:  GGLTRGREFGGGKDL-GRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDRERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPR

Query:  RAGYPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAW
                                                                                P  RL   P+  SP R  NGYRSPPR W
Subjt:  RAGYPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAW

Query:  ARDGPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRS-P
         RD P         P R++   +  +   DR  Y +  +       R I +DWA  +         +  ++RRPP  P    P+ GRW   +RERSRS P
Subjt:  ARDGPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRS-P

Query:  IRGPVRSPLRVSLRSPLSGGLPP--KDFRRDVFVERE-RDDRRGLGRERDGGPF
        +R     PLR      L GG PP  +D+RRD   +RE RDD RG GR R G  +
Subjt:  IRGPVRSPLRVSLRSPLSGGLPP--KDFRRDVFVERE-RDDRRGLGRERDGGPF

AT4G28990.2 RNA-binding protein-related

1.7e-44

33.07

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Query:  MGSRDKDSTT-HHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSAD------------------------------
        MGS +K+ TT HH P +SSLVVR S S+           GR A G DYE GEV RD  P + R DRY  D                              
Subjt:  MGSRDKDSTT-HHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSAD------------------------------

Query:  -------------------LGYRLHAGSASPTRR-RDDHRYISDFDHSGGLTRGREFGGGKDL-GRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDRE
                           LG+R  A S+SP RR  +DH++ SD +HSG   RGRE    ++  GR RD SP  +R  +G RP  RG+DG     G D  
Subjt:  -------------------LGYRLHAGSASPTRR-RDDHRYISDFDHSGGLTRGREFGGGKDL-GRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDRE

Query:  RSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAGYPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRA
           N   V+PREGDWYC DPLC NLNFARR+ C  C + R     SP                                                     
Subjt:  RSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAGYPGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRA

Query:  GYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARDGPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTD
                            P  RL   P+  SP R  NGYRSPPR W RD P         P R++   +  +   DR  Y +  +       R I +D
Subjt:  GYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARDGPRDIAAVDLAPSRYESRYSDHNLRSDRVEYLEDSFKGRSKFDRPIPTD

Query:  WALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRS-PIRGPVRSPLRVSLRSPLSGGLPP--KDFRRDVFVERE-RDDRRGLGRERDGG
        WA  +         +  ++RRPP  P    P+ GRW   +RERSRS P+R     PLR      L GG PP  +D+RRD   +RE RDD RG GR R G 
Subjt:  WALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRS-PIRGPVRSPLRVSLRSPLSGGLPP--KDFRRDVFVERE-RDDRRGLGRERDGG

Query:  PF
         +
Subjt:  PF

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGTTCTCGGGATAAAGACTCCACGACTCACCACCAGCCGTTGTTGAGCAGCCTCGTAGTACGGCTGTCGAATAGCGACGGAGGCGGTGGCGGAGTCGGCGGAGCCAG
CGGCGGCCGCGTTGCTCGTGGAACCGATTATGAGGCCGGTGAGGTTCCTCGCGACCCACCTCCACAATATTATCGATTGGATCGATATTCGGCTGATTTGGGATATAGAC
TACATGCAGGTTCAGCTTCTCCAACACGTCGTCGGGATGATCACCGATATATTTCTGATTTTGATCATTCTGGTGGTCTCACTAGGGGTCGTGAATTTGGTGGTGGCAAG
GATCTTGGTAGACGTCGAGATACTTCACCTCATTACAGTCGAAGAATGAGTGGTGGAAGGCCATTGGGGAGAGGTGTTGACGGTGCTAGATTTGCTCCTGGGCCAGATAG
AGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGAGGGGGATTGGTATTGCTCAGATCCTTTGTGTGACAACCTAAACTTTGCAAGACGAGACTTTTGTAACAACT
GCAACAAACCTCGCACTGGAGCTGGTGGTAGTCCTCGAAGAGCCGGCTATCCTGGTGGAAGCCCTCGAAGGGCTGGCTATGCTGGTGGAAGCCCTCGAAGAGCCGGCTAT
GCTGGTGGAAGCCCTCGAAGAGCCGGCTATGCTGGTGGAAGTCCTCGCAGAGCCGGCTATGCTGGTGGAAGCCCTCGCAGAGCTGGCTATGCTGGTGGAAGCCCTCGGAG
AGCAGGCTATGCTGGCCACTTATCCCTGCATTCTCCTCCTAGACGCTTGGCTGCCCATCCAATTGAACGTTCTCCTGGAAGGAGTCTTAATGGATATAGGTCACCTCCTC
GTGCTTGGGCCAGGGATGGTCCTAGGGATATCGCAGCTGTCGATTTGGCACCTTCGAGGTATGAAAGCAGGTATTCTGATCACAACCTGAGGAGTGATAGGGTGGAATAT
CTAGAAGATAGCTTCAAAGGAAGATCCAAGTTTGACAGGCCAATTCCTACCGACTGGGCCCTTGAAGACCATGGAAGGGATGACTTCATTACCGAGAGGAAGGGGTTCGA
AAGAAGGCCACCATCACCGCCACTGTCGTTGCTTCCTCAGCGTGGCCGTTGGGCGCATGACATTAGAGAGAGGAGTCGTTCCCCAATCAGAGGTCCAGTCCGGTCTCCTT
TGAGAGTCTCGCTTCGGTCTCCATTAAGTGGCGGCCTTCCTCCAAAAGACTTCCGTAGAGATGTCTTTGTTGAAAGGGAGCGCGATGATAGGCGTGGCCTAGGACGAGAG
CGCGACGGAGGTCCATTCTAG

mRNA sequence

Show/hide mRNA sequence

GAAATACCCTTTTACGGAATTTCACGGGCTGAAATTCTGGTAAACTAGAATTTAGGGTTTATGAATGAACTTGATTAAACGATTTATCGGCGTTCAGACTTTGAGATCGA
CCAGTTTCGTGGCTGCCGATCGAAGCAGGCAGAAGATTAGGGCAAACAAGGCGAAACAATGGGTTCTCGGGATAAAGACTCCACGACTCACCACCAGCCGTTGTTGAGCA
GCCTCGTAGTACGGCTGTCGAATAGCGACGGAGGCGGTGGCGGAGTCGGCGGAGCCAGCGGCGGCCGCGTTGCTCGTGGAACCGATTATGAGGCCGGTGAGGTTCCTCGC
GACCCACCTCCACAATATTATCGATTGGATCGATATTCGGCTGATTTGGGATATAGACTACATGCAGGTTCAGCTTCTCCAACACGTCGTCGGGATGATCACCGATATAT
TTCTGATTTTGATCATTCTGGTGGTCTCACTAGGGGTCGTGAATTTGGTGGTGGCAAGGATCTTGGTAGACGTCGAGATACTTCACCTCATTACAGTCGAAGAATGAGTG
GTGGAAGGCCATTGGGGAGAGGTGTTGACGGTGCTAGATTTGCTCCTGGGCCAGATAGAGAACGTAGTAAAAATAATCCAAATGTGCGTCCTAGGGAGGGGGATTGGTAT
TGCTCAGATCCTTTGTGTGACAACCTAAACTTTGCAAGACGAGACTTTTGTAACAACTGCAACAAACCTCGCACTGGAGCTGGTGGTAGTCCTCGAAGAGCCGGCTATCC
TGGTGGAAGCCCTCGAAGGGCTGGCTATGCTGGTGGAAGCCCTCGAAGAGCCGGCTATGCTGGTGGAAGCCCTCGAAGAGCCGGCTATGCTGGTGGAAGTCCTCGCAGAG
CCGGCTATGCTGGTGGAAGCCCTCGCAGAGCTGGCTATGCTGGTGGAAGCCCTCGGAGAGCAGGCTATGCTGGCCACTTATCCCTGCATTCTCCTCCTAGACGCTTGGCT
GCCCATCCAATTGAACGTTCTCCTGGAAGGAGTCTTAATGGATATAGGTCACCTCCTCGTGCTTGGGCCAGGGATGGTCCTAGGGATATCGCAGCTGTCGATTTGGCACC
TTCGAGGTATGAAAGCAGGTATTCTGATCACAACCTGAGGAGTGATAGGGTGGAATATCTAGAAGATAGCTTCAAAGGAAGATCCAAGTTTGACAGGCCAATTCCTACCG
ACTGGGCCCTTGAAGACCATGGAAGGGATGACTTCATTACCGAGAGGAAGGGGTTCGAAAGAAGGCCACCATCACCGCCACTGTCGTTGCTTCCTCAGCGTGGCCGTTGG
GCGCATGACATTAGAGAGAGGAGTCGTTCCCCAATCAGAGGTCCAGTCCGGTCTCCTTTGAGAGTCTCGCTTCGGTCTCCATTAAGTGGCGGCCTTCCTCCAAAAGACTT
CCGTAGAGATGTCTTTGTTGAAAGGGAGCGCGATGATAGGCGTGGCCTAGGACGAGAGCGCGACGGAGGTCCATTCTAGTGCTGAAAATTTAGTTTTCATGTGGCTTCCC
TAGTAATTTTGGGTAGAGCAGAACCTTGTAATCTGTGTTTTAGAGCCTGGAAAGAGGATGTTAAGTAGAGAGCTGGCTTATTTTTGCCTGACTGGTTCAGTGTGTGGAAA
CCTGCTAAATGGGGTATTTACTCTGCCTCGCATGTTTTGTTTTGTGTTTCTTATTATTCTGTTTCATGGCAGCAGAAATAGTTAAATTAATGTTTGACATATATGTTCTG
TAAACTTTGTCATCTTTCATCTTTGGTTTGTATACTCCTGGGCATTGGGCATTGGTTTTGAACCGGT

Protein sequence

Show/hide protein sequence

MGSRDKDSTTHHQPLLSSLVVRLSNSDGGGGGVGGASGGRVARGTDYEAGEVPRDPPPQYYRLDRYSADLGYRLHAGSASPTRRRDDHRYISDFDHSGGLTRGREFGGGK
DLGRRRDTSPHYSRRMSGGRPLGRGVDGARFAPGPDRERSKNNPNVRPREGDWYCSDPLCDNLNFARRDFCNNCNKPRTGAGGSPRRAGYPGGSPRRAGYAGGSPRRAGY
AGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGGSPRRAGYAGHLSLHSPPRRLAAHPIERSPGRSLNGYRSPPRAWARDGPRDIAAVDLAPSRYESRYSDHNLRSDRVEY
LEDSFKGRSKFDRPIPTDWALEDHGRDDFITERKGFERRPPSPPLSLLPQRGRWAHDIRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVFVERERDDRRGLGRE
RDGGPF

Sed0026603 (gene) of Chayote v1 genome