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Sed0026620 (gene) of Chayote v1 genome

Gene IDSed0026620
OrganismSechium edule (Chayote v1)
DescriptionGirdin-like
Genome locationLG03:41207253..41209331
RNA-Seq ExpressionSed0026620
SyntenySed0026620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036941.1 girdin-like [Cucumis melo var. makuwa]6.3e-1756Show/hide
Query:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        +GLT      +  V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

KAA0037618.1 uncharacterized protein E6C27_scaffold277G002790 [Cucumis melo var. makuwa]4.8e-1756Show/hide
Query:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        +GLT      +  V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]6.3e-1726.56Show/hide
Query:  YDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS--------------------------------------
        +DE SDV +WAE+M Q++GD + +S    V   C      ++L  LK+IWE LTP+RR+ FS                                      
Subjt:  YDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS--------------------------------------

Query:  -------------------------------------------------------------------------------TVLFPRDKGYVDSQVVKLFFS
                                                                                        V+FP+ +GYVD +V+KLFF 
Subjt:  -------------------------------------------------------------------------------TVLFPRDKGYVDSQVVKLFFS

Query:  IKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWM
        +++GV+P IP+LA+T R+LNYCR    GK  CC PLLYIW+
Subjt:  IKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWM

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]7.5e-1826.62Show/hide
Query:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------
        NMS  +  ++ +DE SDV +WAE+M Q++GD++ +S    V   C      ++L  LK+IWE LTP+RR+ FS                           
Subjt:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  TVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
         V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  TVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

TYK07552.1 girdin-like [Cucumis melo var. makuwa]6.3e-1726.48Show/hide
Query:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------
        NMS  +  ++ +DE+SDV +WAE+M Q++GD + +S    V   C      ++L  LK+IWE LTP+RR+ FS                           
Subjt:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------

Query:  ------------------------------------------------------------------------------------------TVLFPRDKGY
                                                                                                   V+FP+ +GY
Subjt:  ------------------------------------------------------------------------------------------TVLFPRDKGY

Query:  VDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        VD +V+KLFF +++GV+P IP+LA+T R+LNY R    GK  CC PLLYIW+H
Subjt:  VDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

TrEMBL top hitse value%identityAlignment
A0A5A7T494 Uncharacterized protein2.3e-1756Show/hide
Query:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        +GLT      +  V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

A0A5A7T5S7 Girdin-like3.1e-1756Show/hide
Query:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        +GLT      +  V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  EGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

A0A5A7UL51 Girdin-like3.1e-1726.56Show/hide
Query:  YDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS--------------------------------------
        +DE SDV +WAE+M Q++GD + +S    V   C      ++L  LK+IWE LTP+RR+ FS                                      
Subjt:  YDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS--------------------------------------

Query:  -------------------------------------------------------------------------------TVLFPRDKGYVDSQVVKLFFS
                                                                                        V+FP+ +GYVD +V+KLFF 
Subjt:  -------------------------------------------------------------------------------TVLFPRDKGYVDSQVVKLFFS

Query:  IKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWM
        +++GV+P IP+LA+T R+LNYCR    GK  CC PLLYIW+
Subjt:  IKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWM

A0A5A7UWQ6 Uncharacterized protein3.6e-1826.62Show/hide
Query:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------
        NMS  +  ++ +DE SDV +WAE+M Q++GD++ +S    V   C      ++L  LK+IWE LTP+RR+ FS                           
Subjt:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  TVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
         V+FP+ +GYVD +V+KLFF +++GV+P IP+LAET R+LNYCR    GKL CC PLLYIW+H
Subjt:  TVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

A0A5D3C8D9 Girdin-like3.1e-1726.48Show/hide
Query:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------
        NMS  +  ++ +DE+SDV +WAE+M Q++GD + +S    V   C      ++L  LK+IWE LTP+RR+ FS                           
Subjt:  NMSTRTP-KTIYDEASDVFEWAEKMHQQYGDNLPSS---DVPPFCHAQVISSELGKLKVIWEGLTPERRYNFS---------------------------

Query:  ------------------------------------------------------------------------------------------TVLFPRDKGY
                                                                                                   V+FP+ +GY
Subjt:  ------------------------------------------------------------------------------------------TVLFPRDKGY

Query:  VDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH
        VD +V+KLFF +++GV+P IP+LA+T R+LNY R    GK  CC PLLYIW+H
Subjt:  VDSQVVKLFFSIKKGVDPAIPLLAETCRALNYCRVNEGGKLRCCAPLLYIWMH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCCAAAGTACCCAATATGTCGACACGAACACCCAAGACTATATACGATGAAGCAAGTGATGTGTTTGAATGGGCTGAAAAAATGCATCAACAATATGGAGATAA
TCTACCATCATCCGATGTACCGCCCTTTTGTCATGCTCAAGTCATTTCAAGTGAATTGGGAAAACTTAAAGTTATCTGGGAAGGCCTGACACCAGAGCGAAGATATAACT
TCTCAACAGTTTTGTTTCCTAGAGATAAAGGGTACGTTGATAGTCAAGTTGTGAAGCTATTCTTCAGTATAAAAAAAGGTGTGGACCCAGCTATTCCCCTCCTTGCAGAA
ACTTGTAGAGCTCTAAATTATTGTCGAGTAAACGAAGGAGGAAAGCTCAGATGTTGTGCCCCATTACTTTACATATGGATGCACATAAATGAGAGTTTAGGCACTGTACG
AGTAAGGGCTAGACAAGCTCGAGGCTTTGCATCTTGGGCCAAAGATCTTCGTGACAGTACTTCACCCATGGTCTCAAATGTTGATGAGTTGTATGAATTCTTGGGGAAAA
TTCGTAGAGACTTGGGATACTTTGGAAATTTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCCAAAGTACCCAATATGTCGACACGAACACCCAAGACTATATACGATGAAGCAAGTGATGTGTTTGAATGGGCTGAAAAAATGCATCAACAATATGGAGATAA
TCTACCATCATCCGATGTACCGCCCTTTTGTCATGCTCAAGTCATTTCAAGTGAATTGGGAAAACTTAAAGTTATCTGGGAAGGCCTGACACCAGAGCGAAGATATAACT
TCTCAACAGTTTTGTTTCCTAGAGATAAAGGGTACGTTGATAGTCAAGTTGTGAAGCTATTCTTCAGTATAAAAAAAGGTGTGGACCCAGCTATTCCCCTCCTTGCAGAA
ACTTGTAGAGCTCTAAATTATTGTCGAGTAAACGAAGGAGGAAAGCTCAGATGTTGTGCCCCATTACTTTACATATGGATGCACATAAATGAGAGTTTAGGCACTGTACG
AGTAAGGGCTAGACAAGCTCGAGGCTTTGCATCTTGGGCCAAAGATCTTCGTGACAGTACTTCACCCATGGTCTCAAATGTTGATGAGTTGTATGAATTCTTGGGGAAAA
TTCGTAGAGACTTGGGATACTTTGGAAATTTTCTTTAA
Protein sequenceShow/hide protein sequence
MNSKVPNMSTRTPKTIYDEASDVFEWAEKMHQQYGDNLPSSDVPPFCHAQVISSELGKLKVIWEGLTPERRYNFSTVLFPRDKGYVDSQVVKLFFSIKKGVDPAIPLLAE
TCRALNYCRVNEGGKLRCCAPLLYIWMHINESLGTVRVRARQARGFASWAKDLRDSTSPMVSNVDELYEFLGKIRRDLGYFGNFL