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Sed0026627 (gene) of Chayote v1 genome

Gene IDSed0026627
OrganismSechium edule (Chayote v1)
DescriptionDUF4216 domain-containing protein
Genome locationLG08:1859639..1860790
RNA-Seq ExpressionSed0026627
SyntenySed0026627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1209333.1 hypothetical protein CJ030_MR6G016564 [Morella rubra]6.0e-0440.54Show/hide
Query:  RGISTGAKLER-NVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL
        RG + G  L +   T  G LSV    +    VG  ++ LS QIG+LVRG+ P+ ++ W EV PE K  +K R+L
Subjt:  RGISTGAKLER-NVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL

KAB1227969.1 hypothetical protein CJ030_MR1G005024 [Morella rubra]7.8e-0433.66Show/hide
Query:  DVVPETLPSEET---QESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRL
        DV P  + + E    ++   T  S+  RG + G  LE+++ +  G LSV   +     V   A++LS +IG+LVRG  P+++NKW +V  E+K  +  R+
Subjt:  DVVPETLPSEET---QESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRL

Query:  L
        L
Subjt:  L

XP_028068681.1 uncharacterized protein LOC114271250 [Camellia sinensis]2.1e-0440.23Show/hide
Query:  ETQESDSTFRSRHCRGISTGAKLERNVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFP-VTLNKWKEVTPELKNLVKQRL
        E     S  RSRH RG++ G K++  V   G L V   QEY   VG  AS L  +IGV VR   P  ++ +WK V  E+   + QRL
Subjt:  ETQESDSTFRSRHCRGISTGAKLERNVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFP-VTLNKWKEVTPELKNLVKQRL

XP_028085646.1 uncharacterized protein LOC114286664 [Camellia sinensis]2.7e-0436.79Show/hide
Query:  ETVDDQDVVPETLPSEETQES---DSTFRSRHCRGISTGAKLERNVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFP-VTLNKWKEVTPELKN
        +  D Q   P  +  E  +E+    S  RSRH RG++ G K++  V   G L V   QEY   VG  AS L  +IGV VR   P  ++ +WK V  E+  
Subjt:  ETVDDQDVVPETLPSEETQES---DSTFRSRHCRGISTGAKLERNVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFP-VTLNKWKEVTPELKN

Query:  LVKQRL
         + QRL
Subjt:  LVKQRL

TrEMBL top hitse value%identityAlignment
A0A6A1V083 Uncharacterized protein6.5e-0432.41Show/hide
Query:  SEETQESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL--------VC
        S+ T    +T  S+  RG + G  LE+++ +  G LSV   +     V   A++LS +IG+LVRG  P+++NKW +V  E+K  +  R+L        VC
Subjt:  SEETQESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL--------VC

Query:  LKIHSSYF
           ++ +F
Subjt:  LKIHSSYF

A0A6A1V119 Uncharacterized protein6.5e-0436.9Show/hide
Query:  STFRSRHCRGISTGAKLERNV---TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL
        ST  S+  RG + G  LE+++   +  G LSV   +     V   A++LS +IG+LVRG  P+++NKW +V  E+K  +  R+L
Subjt:  STFRSRHCRGISTGAKLERNV---TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL

A0A6A1V9D4 Uncharacterized protein2.9e-0440.54Show/hide
Query:  RGISTGAKLER-NVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL
        RG + G  L +   T  G LSV    +    VG  ++ LS QIG+LVRG+ P+ ++ W EV PE K  +K R+L
Subjt:  RGISTGAKLER-NVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL

A0A6A1WH14 Uncharacterized protein8.5e-0436.9Show/hide
Query:  STFRSRHCRGISTGAKLERNV---TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL
        ST  S+  RG + G  LE+++   +  G LSV   +     V   A++LS +IG+LVRG  P+++NKW +V  E+K  +  R+L
Subjt:  STFRSRHCRGISTGAKLERNV---TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRLL

A0A6A1WRQ5 DUF4216 domain-containing protein3.8e-0433.66Show/hide
Query:  DVVPETLPSEET---QESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRL
        DV P  + + E    ++   T  S+  RG + G  LE+++ +  G LSV   +     V   A++LS +IG+LVRG  P+++NKW +V  E+K  +  R+
Subjt:  DVVPETLPSEET---QESDSTFRSRHCRGISTGAKLERNV-TNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKNLVKQRL

Query:  L
        L
Subjt:  L

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGGTAATTTGTCGGGGATGTTTAACACATTATTTGATGAGACCGTTGATGATCAGGATGTTGTTCCTGAGACTTTGCCTTCTGAGGAGACTCAGGAATCAGATAG
TACATTTAGATCTCGACACTGTCGAGGTATTTCGACTGGAGCTAAGTTGGAGAGGAACGTAACTAATCACGGCATTCTCAGTGTCAAATTCAGTCAGGAGTACGAAAAGG
CTGTTGGACCAATTGCAAGTAGCTTGAGTAAGCAGATCGGGGTGCTTGTGAGAGGGTCATTTCCTGTGACTCTCAATAAATGGAAAGAGGTCACTCCAGAATTGAAGAAC
CTAGTGAAACAAAGACTCTTGGTATGTTTAAAAATACATAGTTCGTATTTTATGCAAAATTTTGTTCTATTAATCTATACATTTGTTTTACATAGTCACACTTCAACCTA
G
mRNA sequenceShow/hide mRNA sequence
GCAGAACAAGTGTTTTATATAAGTGATCCAAAGTACGGTCAAAATTGGAAGGTAGTGCAATTAGTACCGAATAAAAAACTATGGGATGTGCCTGAAGTGGAAGAGCAAGA
GGATGAAGAACTTGATGAAATACAACTAGAAGGCCGAACGACTGTCGATGAGTGTATAGAAGAAAACAGATTAGATAGGATTGATGTCGAACCAGTCATAGTTGATTTAA
CACTGAATAGGAGACAATCGTCAAATAATTTGGACGATTTCATCGACGACCATGAGATCCAAGATGATCGAGAGATGTCTCCTGAGAGCCTCTCATTGGATGATTATTTT
TCAGACTAATTAATATATACTTAATGAAGTCATGCCTGGTAATTTGTCGGGGATGTTTAACACATTATTTGATGAGACCGTTGATGATCAGGATGTTGTTCCTGAGACTT
TGCCTTCTGAGGAGACTCAGGAATCAGATAGTACATTTAGATCTCGACACTGTCGAGGTATTTCGACTGGAGCTAAGTTGGAGAGGAACGTAACTAATCACGGCATTCTC
AGTGTCAAATTCAGTCAGGAGTACGAAAAGGCTGTTGGACCAATTGCAAGTAGCTTGAGTAAGCAGATCGGGGTGCTTGTGAGAGGGTCATTTCCTGTGACTCTCAATAA
ATGGAAAGAGGTCACTCCAGAATTGAAGAACCTAGTGAAACAAAGACTCTTGGTATGTTTAAAAATACATAGTTCGTATTTTATGCAAAATTTTGTTCTATTAATCTATA
CATTTGTTTTACATAGTCACACTTCAACCTAGACCTTAGTAATCCTATGGTAAGCAAACATATAGAGGACGTGATGCAAACCACGTTCAAGGCCTACAGATGCTCGTTGC
ACAAACATTACAAGCTTCTTGATCCGACAATTCGACGATCGAACCCACATATTAGC
Protein sequenceShow/hide protein sequence
MPGNLSGMFNTLFDETVDDQDVVPETLPSEETQESDSTFRSRHCRGISTGAKLERNVTNHGILSVKFSQEYEKAVGPIASSLSKQIGVLVRGSFPVTLNKWKEVTPELKN
LVKQRLLVCLKIHSSYFMQNFVLLIYTFVLHSHTST