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Sed0026635 (gene) of Chayote v1 genome

Gene IDSed0026635
OrganismSechium edule (Chayote v1)
DescriptionProtein IDA
Genome locationLG07:34810008..34810307
RNA-Seq ExpressionSed0026635
SyntenySed0026635
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034518.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]2.0e-1961.46Show/hide
Query:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        +SSSSF++K     N++ IF++ LLLLSGF SATRPG TM      D SNSN +      T FRY GQTF FLP+GVPIPPSGPSDRHNSV DS+P
Subjt:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

KAG6574002.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2164.95Show/hide
Query:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        MASSSS        +N V I V+ALLLLSGFCSATRP K  GP MDS       Q   NY+TGFRY G+TFSFLPR +PIPPS PSDRHNSV DSVP
Subjt:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

KAG6601330.1 Protein IDA, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2465.98Show/hide
Query:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        M SSSS        S+   IFV+ LLL+SGFCSATRPGKTMG  +  D S      NFNY+TGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+ DS+P
Subjt:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

KAG7032113.1 Protein IDA, partial [Cucurbita argyrosperma subsp. argyrosperma]6.7e-2369.88Show/hide
Query:  SNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        S+   IFV+ LLL+SGFCSATRPGKTMG  +  D        NFNY+TGFRYVGQTFS+LPRGVPIPPSGPSDRHNS+ DS+P
Subjt:  SNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

TYK09072.1 putative Membrane lipoprotein [Cucumis melo var. makuwa]2.0e-1961.46Show/hide
Query:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        +SSSSF++K     N++ IF++ LLLLSGF SATRPG TM      D SNSN +      T FRY GQTF FLP+GVPIPPSGPSDRHNSV DS+P
Subjt:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

TrEMBL top hitse value%identityAlignment
A0A0A0KR07 Uncharacterized protein1.6e-1760.2Show/hide
Query:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMG-PGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        M SSSS    P      + I ++ LLLLSG  SATRPGKTM    M+ D SNS       Y+T FRY GQTFSFLP+GVPIPPSGPSDRHNSV DS+P
Subjt:  MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMG-PGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

A0A5A7SV51 Putative Membrane lipoprotein9.7e-2061.46Show/hide
Query:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        +SSSSF++K     N++ IF++ LLLLSGF SATRPG TM      D SNSN +      T FRY GQTF FLP+GVPIPPSGPSDRHNSV DS+P
Subjt:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

A0A5D3CCP4 Putative Membrane lipoprotein9.7e-2061.46Show/hide
Query:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP
        +SSSSF++K     N++ IF++ LLLLSGF SATRPG TM      D SNSN +      T FRY GQTF FLP+GVPIPPSGPSDRHNSV DS+P
Subjt:  ASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVP

A0A5N5H8T3 Protein IDA2.7e-1453.4Show/hide
Query:  MASSSSFKYKPFCLSNAVTIFVVALL--LLSGFCSATRPGKTMGPGMDSDA-SNSNQQDNFN---YRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVAD
        MAS+SS K K F  S   T+FVV L+  LL G C+ATR GKT+   +D  A  N +    FN   + TGFRY GQ FS+ P+G  IPPSGPS RHNSV D
Subjt:  MASSSSFKYKPFCLSNAVTIFVVALL--LLSGFCSATRPGKTMGPGMDSDA-SNSNQQDNFN---YRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVAD

Query:  SVP
        S P
Subjt:  SVP

A0A6J5TMQ2 Uncharacterized protein6.1e-1450Show/hide
Query:  SSSSFKYKPFCLSNAVTIFVVAL-LLLSGFCSATRPGKTM---GPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPH
        +SSS K K F  S   T+FVV+L LLL+G CS  R GKT+    P +  +  ++   +   ++TGF+Y GQ FSF P+G PIPPSGPS RHNS  DS PH
Subjt:  SSSSFKYKPFCLSNAVTIFVVAL-LLLSGFCSATRPGKTM---GPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPH

SwissProt top hitse value%identityAlignment
Q8LAD7 Protein IDA5.0e-0567.86Show/hide
Query:  FSFLPRGVPIPPSGPSDRHNSVADSVPH
        F +LP+GVPIPPS PS RHNS  +S+PH
Subjt:  FSFLPRGVPIPPSGPSDRHNSVADSVPH

Arabidopsis top hitse value%identityAlignment
AT1G68765.1 Putative membrane lipoprotein3.5e-0667.86Show/hide
Query:  FSFLPRGVPIPPSGPSDRHNSVADSVPH
        F +LP+GVPIPPS PS RHNS  +S+PH
Subjt:  FSFLPRGVPIPPSGPSDRHNSVADSVPH

AT3G25655.1 inflorescence deficient in abscission (IDA)-like 11.1e-0430.86Show/hide
Query:  VTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPH
        +T+++V LL+   + +  R    +GP   S+      +       GF + G+ F    + V +PPSGPS RHNSV +++ H
Subjt:  VTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTTCTTCTTTCAAATACAAACCCTTTTGTTTAAGCAACGCAGTCACCATTTTCGTTGTTGCTCTGCTTCTCCTTTCCGGGTTTTGCTCGGCAACTCGGCC
GGGTAAGACGATGGGACCGGGGATGGATTCCGACGCGTCGAATTCTAACCAGCAAGACAATTTCAATTACAGGACGGGGTTCCGATATGTCGGCCAAACGTTCAGCTTTC
TCCCCAGAGGCGTTCCCATCCCTCCTTCTGGCCCTTCCGACAGGCACAACTCTGTAGCTGACTCTGTTCCTCACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTTCTTCTTCTTTCAAATACAAACCCTTTTGTTTAAGCAACGCAGTCACCATTTTCGTTGTTGCTCTGCTTCTCCTTTCCGGGTTTTGCTCGGCAACTCGGCC
GGGTAAGACGATGGGACCGGGGATGGATTCCGACGCGTCGAATTCTAACCAGCAAGACAATTTCAATTACAGGACGGGGTTCCGATATGTCGGCCAAACGTTCAGCTTTC
TCCCCAGAGGCGTTCCCATCCCTCCTTCTGGCCCTTCCGACAGGCACAACTCTGTAGCTGACTCTGTTCCTCACACTTGA
Protein sequenceShow/hide protein sequence
MASSSSFKYKPFCLSNAVTIFVVALLLLSGFCSATRPGKTMGPGMDSDASNSNQQDNFNYRTGFRYVGQTFSFLPRGVPIPPSGPSDRHNSVADSVPHT