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Sed0026637 (gene) of Chayote v1 genome

Gene IDSed0026637
OrganismSechium edule (Chayote v1)
DescriptionHTH myb-type domain-containing protein
Genome locationLG01:70957301..70957884
RNA-Seq ExpressionSed0026637
SyntenySed0026637
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0043229 - intracellular organelle (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1212066.1 hypothetical protein CJ030_MR5G024638 [Morella rubra]6.2e-0945.45Show/hide
Query:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF
        MK+   S        +L  RIA++GS+++ V   ++  L C   S+  R LV K KS WK N  WQ    QYSYDL SYSLNFDDG F
Subjt:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF

KAE7997876.1 hypothetical protein FH972_002472 [Carpinus fangiana]3.1e-0851.22Show/hide
Query:  SLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF
        SL   QF  +LG RIA+SG S +     ++  L C   S + R LV K KSQWK    WQ   VQYSYD  SYSLNFDDG F
Subjt:  SLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF

KAF3967419.1 hypothetical protein CMV_008585 [Castanea mollissima]5.3e-0850Show/hide
Query:  RLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        +L  RIA++GS  + +   ++ PL C   S   R LV KLKSQWK     Q  + QYSYDL SYSLNFDDG  H
Subjt:  RLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH

KAG6606355.1 hypothetical protein SDJN03_03672, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2982.56Show/hide
Query:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSCSSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        MKVLGFSLW  QF  RLGNRIANSGSSIS+V D K PPLSCSSS RHL+LKLK QWKHN R Q RTVQYSYDLQSYSLNFDDGL H
Subjt:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSCSSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH

KGN58293.1 hypothetical protein Csa_017624 [Cucumis sativus]1.5e-2369.47Show/hide
Query:  MKVLGFSLWNCQFSSRLGNRIANSGSSISH----VVDPKKPPLSC----SSSFRHLVLKLKSQWK-HNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        MK LGFSLW  QF  +LGNRIANSGSS S     V D +KPP  C    S SF+HL+LKLKSQWK HN RWQN TV+YSYDLQSYSLNFDDGL H
Subjt:  MKVLGFSLWNCQFSSRLGNRIANSGSSISH----VVDPKKPPLSC----SSSFRHLVLKLKSQWK-HNFRWQNRTVQYSYDLQSYSLNFDDGLFH

TrEMBL top hitse value%identityAlignment
A0A0A0L8W7 Uncharacterized protein7.4e-2469.47Show/hide
Query:  MKVLGFSLWNCQFSSRLGNRIANSGSSISH----VVDPKKPPLSC----SSSFRHLVLKLKSQWK-HNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        MK LGFSLW  QF  +LGNRIANSGSS S     V D +KPP  C    S SF+HL+LKLKSQWK HN RWQN TV+YSYDLQSYSLNFDDGL H
Subjt:  MKVLGFSLWNCQFSSRLGNRIANSGSSISH----VVDPKKPPLSC----SSSFRHLVLKLKSQWK-HNFRWQNRTVQYSYDLQSYSLNFDDGLFH

A0A2N9IXX4 Uncharacterized protein4.7e-1054.05Show/hide
Query:  RLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        +LG RIA++GS+ +   D +K  L C   S   R L+ K KSQWK  FR Q  + QYSYDL SYSLNFDDGLF+
Subjt:  RLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH

A0A5N6QEZ1 Uncharacterized protein1.5e-0851.22Show/hide
Query:  SLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF
        SL   QF  +LG RIA+SG S +     ++  L C   S + R LV K KSQWK    WQ   VQYSYD  SYSLNFDDG F
Subjt:  SLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF

A0A6A1VJQ4 Uncharacterized protein3.0e-0945.45Show/hide
Query:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF
        MK+   S        +L  RIA++GS+++ V   ++  L C   S+  R LV K KS WK N  WQ    QYSYDL SYSLNFDDG F
Subjt:  MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSC---SSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLF

B9SKN8 Uncharacterized protein1.7e-0743.33Show/hide
Query:  MKVL-GFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSCSSS---FRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH
        MK+L G S+   QF  + G RIA + S+I+      + P SC       R L+ K ++QWK    W+  +V+YSYD+ SYSLNFDDGL+H
Subjt:  MKVL-GFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSCSSS---FRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTTTTAGGGTTTAGTTTGTGGAATTGTCAATTCTCAAGCAGGCTTGGGAACAGGATTGCAAATTCTGGGTCTTCAATTTCTCATGTGGTTGATCCCAAAAAGCC
TCCTTTGAGCTGTTCATCTTCTTTCAGACACTTGGTTTTGAAGCTCAAATCTCAGTGGAAGCACAACTTTAGATGGCAAAACAGAACTGTTCAGTACAGCTATGATCTTC
AAAGCTATTCTCTTAACTTTGATGATGGTTTGTTTCATTGA
mRNA sequenceShow/hide mRNA sequence
CAAAAAATAAAAAAATAAAAAAATAAAATAAAAACCCCAATTCATTTCTCTATCTTCCTTTTTCTTTCATTCCTCCAAATTTGTGATAACTTCTGTCCTCAACTGCAAAA
AACACCACCCCCCCCTTCATCTCTCTCAGTGATCTAAGCCTTCAAAATGAAGGTTTTAGGGTTTAGTTTGTGGAATTGTCAATTCTCAAGCAGGCTTGGGAACAGGATTG
CAAATTCTGGGTCTTCAATTTCTCATGTGGTTGATCCCAAAAAGCCTCCTTTGAGCTGTTCATCTTCTTTCAGACACTTGGTTTTGAAGCTCAAATCTCAGTGGAAGCAC
AACTTTAGATGGCAAAACAGAACTGTTCAGTACAGCTATGATCTTCAAAGCTATTCTCTTAACTTTGATGATGGTTTGTTTCATTGAATTTCAATTTTAATGTTTTCTCT
GTTTTTGTGTTCCCTTTTCTCTCCATACCCATTTCTGTAAATTGTGAATTAATCAAGGGTCTATGATGGGTCCTTGCCAAAAATAATAATAAAACCATAAAATGGGTCTG
TTTTTGCAATTTTTTTTTTGTTCATGTAATTAGC
Protein sequenceShow/hide protein sequence
MKVLGFSLWNCQFSSRLGNRIANSGSSISHVVDPKKPPLSCSSSFRHLVLKLKSQWKHNFRWQNRTVQYSYDLQSYSLNFDDGLFH