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Sed0026647 (gene) of Chayote v1 genome

Gene IDSed0026647
OrganismSechium edule (Chayote v1)
DescriptionCentromere protein X
Genome locationLG08:359010..360201
RNA-Seq ExpressionSed0026647
SyntenySed0026647
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0051382 - kinetochore assembly (biological process)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR018552 - Centromere protein X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589406.1 Protein JINGUBANG, partial [Cucurbita argyrosperma subsp. sororia]3.0e-4293.2Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022135388.1 protein MHF2 homolog [Momordica charantia]6.0e-4394.17Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE AFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEVEAGTSKK RPMSANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022921828.1 protein MHF2 homolog [Cucurbita moschata]3.0e-4293.2Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_022987126.1 protein MHF2 homolog [Cucurbita maxima]3.0e-4293.2Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEW+RRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

XP_023516676.1 protein MHF2 homolog [Cucurbita pepo subsp. pepo]1.3e-4294.17Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

TrEMBL top hitse value%identityAlignment
A0A0A0LU58 Uncharacterized protein1.1e-3786.79Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVE--AGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLP
        MEE  F  DLIHAIFKLEWSRRSLEREKNE++ DAMDCEV+  AGTSKK RPMSANANALKLSSKL+QIF+SEAVQRAATIAEAEGISRIE THLERVLP
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESS-DAMDCEVE--AGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLP

Query:  QLLLDF
        QLLLDF
Subjt:  QLLLDF

A0A1S3CLK5 centromere protein X isoform X22.2e-3886.67Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVE--AGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQ
        MEE  F  DLIHAIFKLEWSRRSLEREKNE+ DAMDCEV+  AGTSKK RPMSANANALKLSSKL+QIF+SEAVQRAATIAEAEGI RIE THLERVLPQ
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVE--AGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQ

Query:  LLLDF
        LLLDF
Subjt:  LLLDF

A0A6J1C4N9 protein MHF2 homolog2.9e-4394.17Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE AFD DLIHAIFKLEWSRRSLERE+NESSDAMDCEVEAGTSKK RPMSANANALKLSSKLLQIF+SEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1E4X1 protein MHF2 homolog1.5e-4293.2Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEWSRRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKL+SKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

A0A6J1JD93 protein MHF2 homolog1.5e-4293.2Show/hide
Query:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL
        MEE  FD DLIHAIFKLEW+RRSLEREKNESSDAMDCEV+AGTSKK RPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLER+LPQLL
Subjt:  MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLL

Query:  LDF
        LDF
Subjt:  LDF

SwissProt top hitse value%identityAlignment
A8MT69 Centromere protein X2.0e-0449.02Show/hide
Query:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        + +AL+L  +LL++FV EA  R    A+AE   R++   LE+VLPQLLLDF
Subjt:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

P0DJH7 Centromere protein X7.3e-0752.94Show/hide
Query:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        N +AL L ++LL++FV EA  RAA  A+AE + +++  H+E+VLPQLLLDF
Subjt:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

Q2NKU0 Centromere protein X4.7e-0646.55Show/hide
Query:  KGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        K +    + +AL+L ++LL+IFV EA  R+   A+AEG++ ++   LE+VLPQLLLDF
Subjt:  KGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

Q5RBU1 Centromere protein X2.0e-0449.02Show/hide
Query:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        + +AL+L  +LL++FV EA  R    A+AE   R++   LE+VLPQLLLDF
Subjt:  NANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

Q8L7N3 Protein MHF2 homolog6.7e-2970.41Show/hide
Query:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R  SANANALKLS +LL+ FVSEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Subjt:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

Arabidopsis top hitse value%identityAlignment
AT1G78790.1 unknown protein4.8e-3070.41Show/hide
Query:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R  SANANALKLS +LL+ FVSEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Subjt:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF

AT1G78790.2 unknown protein2.6e-2056.12Show/hide
Query:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF
        FD DLIHAIFK  W+RR  ERE++++ DA + EV  GT+KK R                    SEAVQRAA IAEAEG+ +IEATHLER+LPQLLLDF
Subjt:  FDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAATCGCATTCGATCTTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTG
CGAGGTTGAGGCTGGAACATCCAAGAAGGGCAGACCAATGTCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAGATTTTTGTCTCAGAGGCTGTGCAGC
GTGCTGCAACAATTGCTGAAGCAGAAGGCATAAGCAGAATTGAAGCCACTCATTTGGAGAGAGTTCTTCCACAGTTACTGCTGGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAATCGCATTCGATCTTGATCTGATTCACGCCATCTTCAAGCTCGAGTGGAGCAGAAGATCACTTGAGCGCGAGAAAAACGAGAGTTCTGATGCTATGGATTG
CGAGGTTGAGGCTGGAACATCCAAGAAGGGCAGACCAATGTCAGCCAATGCAAATGCACTTAAATTGAGCTCTAAACTTCTACAGATTTTTGTCTCAGAGGCTGTGCAGC
GTGCTGCAACAATTGCTGAAGCAGAAGGCATAAGCAGAATTGAAGCCACTCATTTGGAGAGAGTTCTTCCACAGTTACTGCTGGATTTTTGA
Protein sequenceShow/hide protein sequence
MEEIAFDLDLIHAIFKLEWSRRSLEREKNESSDAMDCEVEAGTSKKGRPMSANANALKLSSKLLQIFVSEAVQRAATIAEAEGISRIEATHLERVLPQLLLDF