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Sed0026653 (gene) of Chayote v1 genome

Gene IDSed0026653
OrganismSechium edule (Chayote v1)
DescriptionFumarate reductase subunit C
Genome locationLG07:38473183..38478831
RNA-Seq ExpressionSed0026653
SyntenySed0026653
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142437.1 uncharacterized protein LOC101208712 isoform X1 [Cucumis sativus]1.0e-5888.72Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMGQ  EPK I  A+NA RA  SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQ+KVDI+NYEYKRIPKPTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

XP_008446874.1 PREDICTED: uncharacterized protein LOC103489460 isoform X1 [Cucumis melo]6.0e-5988.72Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMG+ TEPK I  A+NAARA  SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQE+VDI+NYEYKRIP+PTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]4.6e-5990.23Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMGQ TE K    ANNAAR  +SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKVDI+NYEYKRIPKPTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

XP_023533207.1 uncharacterized protein LOC111795161 [Cucurbita pepo subsp. pepo]1.0e-5889.47Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMGQ TE K    ANNAAR  +SPSMF+RWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKVDI+NYEYKRIPKPTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]6.0e-5988.72Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAG+GQ TEPK I   NNA RA  SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKVDI+NYEYKRIPKPTD+ S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

TrEMBL top hitse value%identityAlignment
A0A067DTX0 Uncharacterized protein1.6e-4974.63Show/hide
Query:  TMTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKP
        T   T+  M Q  +PKN+  +  +++AQT PS F+RWGR+HPF+RYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEI E RKALSRTGP+DAYKP
Subjt:  TMTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKP

Query:  KNISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        KNISLEEEL+ALQEKVDI+NYEYKRIP+P +  S
Subjt:  KNISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X12.9e-5988.72Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMG+ TEPK I  A+NAARA  SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQE+VDI+NYEYKRIP+PTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

A0A6J1CBH5 uncharacterized protein LOC1110100642.8e-5483.46Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTS E GM Q  EP  I  A N ARA  SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKV+I++YEYKRIPKP+ R S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

A0A6J1GWL5 uncharacterized protein LOC1114581292.2e-5990.23Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAGMGQ TE K    ANNAAR  +SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKVDI+NYEYKRIPKPTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

A0A6J1HX89 uncharacterized protein LOC1114686486.4e-5989.47Show/hide
Query:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MTSTEAG+GQ TE K    ANNAAR  +SPSMFRRWGRRHPFIRYGLPMISLTV GA+GLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
Subjt:  MTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        NISLEEELRALQEKVDI+NYEYKRIPKPTDR S
Subjt:  NISLEEELRALQEKVDIDNYEYKRIPKPTDRPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein5.2e-4567.16Show/hide
Query:  MTSTEAGM-GQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKP
        MT+ E G   Q + P            Q+S S F+RWGRRHPF+RYGLPMISLTVFGA+GLG LLQGSKDIAKVKDDQEWEI E RKALSRTGP+DAYKP
Subjt:  MTSTEAGM-GQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKP

Query:  KNISLEEELRALQEKVDIDNYEYKRIPKPTDRPS
        KN S+E+EL+A+QEKVDI+ YEYK+IPK  +  S
Subjt:  KNISLEEELRALQEKVDIDNYEYKRIPKPTDRPS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACACTGTTAAAATATTGCTATTTGTGTCTCGTTTTTATTGTTCTTTTTTTTTTGCAGTATTTTATTGCTCGTTTTTGTTCTAGAGGCATAATCTTGCGTTTTTC
CATGGTTTGCACAATGACCAGCACTGAGGCAGGAATGGGTCAGTGTACCGAACCAAAGAATATTCCGCCTGCCAACAATGCAGCTCGAGCTCAGACATCTCCATCCATGT
TTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATTTCTCTCACTGTGTTTGGGGCAATTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGAT
ATTGCCAAGGTAAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAGGCGCTTTCACGAACAGGACCTATCGATGCTTATAAGCCGAAAAACATATCGTTGGAGGA
GGAGTTGAGGGCTTTACAAGAAAAGGTAGACATCGATAACTATGAGTACAAACGAATTCCAAAGCCTACCGATCGACCGTCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACACTGTTAAAATATTGCTATTTGTGTCTCGTTTTTATTGTTCTTTTTTTTTTGCAGTATTTTATTGCTCGTTTTTGTTCTAGAGGCATAATCTTGCGTTTTTC
CATGGTTTGCACAATGACCAGCACTGAGGCAGGAATGGGTCAGTGTACCGAACCAAAGAATATTCCGCCTGCCAACAATGCAGCTCGAGCTCAGACATCTCCATCCATGT
TTAGAAGATGGGGTAGAAGACACCCATTTATCAGATATGGACTTCCAATGATTTCTCTCACTGTGTTTGGGGCAATTGGTCTTGGCCATCTCTTGCAAGGAAGTAAAGAT
ATTGCCAAGGTAAAAGATGATCAAGAATGGGAGATCACTGAGATGAGAAAGGCGCTTTCACGAACAGGACCTATCGATGCTTATAAGCCGAAAAACATATCGTTGGAGGA
GGAGTTGAGGGCTTTACAAGAAAAGGTAGACATCGATAACTATGAGTACAAACGAATTCCAAAGCCTACCGATCGACCGTCGTAA
Protein sequenceShow/hide protein sequence
METLLKYCYLCLVFIVLFFLQYFIARFCSRGIILRFSMVCTMTSTEAGMGQCTEPKNIPPANNAARAQTSPSMFRRWGRRHPFIRYGLPMISLTVFGAIGLGHLLQGSKD
IAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELRALQEKVDIDNYEYKRIPKPTDRPS