; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026668 (gene) of Chayote v1 genome

Gene IDSed0026668
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG12:33277976..33279612
RNA-Seq ExpressionSed0026668
SyntenySed0026668
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022921934.1 uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata]2.5e-2769.09Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKLDG AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRG
        L+   L+  G
Subjt:  LDRVGLDRRG
XP_022921935.1 uncharacterized protein LOC111430042 isoform X2 [Cucurbita moschata]2.3e-2866.09Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKLDG AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLW
        L+  G+++    + W
Subjt:  LDRVGLDRRGATKLW
XP_022988483.1 uncharacterized protein LOC111485711 isoform X1 [Cucurbita maxima]5.6e-2764.35Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKL G AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLW
         +  G+++    + W
Subjt:  LDRVGLDRRGATKLW
XP_023515554.1 uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo]8.6e-2865.22Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP + AA ALTRRSVLCLYTSNHETLLASN +L+R LLVEA DEDDKLDG AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLW
        L+   +++    + W
Subjt:  LDRVGLDRRGATKLW
XP_038876903.1 uncharacterized protein LOC120069257 [Benincasa hispida]1.2e-2671.72Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKV
        MAG LPGVECARRRRC QN + SDSPPI AA ALTRRSVLCLYTSNHE+LLASN +LQR LL+EA  ED++LDG AREAKRRLD+RLR+  K ++ +++
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKV
TrEMBL top hitse value%identityAlignment
A0A6J1C2J4 uncharacterized protein LOC1110068551.7e-2663.93Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL  A DEDDKLD +AREAKRRLD+RLR+       +K E
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLWSVLWLKT
        ++ +G  R G  K   + W K+
Subjt:  LDRVGLDRRGATKLWSVLWLKT
A0A6J1E1Y4 uncharacterized protein LOC111430042 isoform X11.2e-2769.09Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKLDG AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRG
        L+   L+  G
Subjt:  LDRVGLDRRG
A0A6J1E765 uncharacterized protein LOC111430042 isoform X21.1e-2866.09Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKLDG AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLW
        L+  G+++    + W
Subjt:  LDRVGLDRRGATKLW
A0A6J1JLN2 uncharacterized protein LOC111485711 isoform X21.7e-2678.26Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTK
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKL G AREAKRRLD+RLR+  K
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTK
A0A6J1JME7 uncharacterized protein LOC111485711 isoform X12.7e-2764.35Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE
        MAG LPGVECARRRRC QN + SDSP I AA ALTRRSVLCLYTSNHETLLASN +L+R LL+EA DEDDKL G AREAKRRLD+RLR+  K ++    +
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVE

Query:  LDRVGLDRRGATKLW
         +  G+++    + W
Subjt:  LDRVGLDRRGATKLW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15580.1 RING/U-box superfamily protein2.7e-1141.82Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPI----------AAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEA--RDEDDKLDGVAREAKRRLDQRLR
        MAG LPGVECARRRR         +PPI          AA    TRR    LYT+NHE+  A     +R +  ++   D D+KLDG A+EAK+RL++RLR
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPI----------AAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEA--RDEDDKLDGVAREAKRRLDQRLR

Query:  SLTKLKEDKK
           + +++ K
Subjt:  SLTKLKEDKK
AT2G15580.2 RING/U-box superfamily protein2.7e-1141.96Show/hide
Query:  MAGTLPGVECARRRRCRQNNLRSDSPPI----------AAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEA--RDEDDKLDGVAREAKRRLDQRLR
        MAG LPGVECARRRR         +PPI          AA    TRR    LYT+NHE+  A     +R +  ++   D D+KLDG A+EAK+RL++RLR
Subjt:  MAGTLPGVECARRRRCRQNNLRSDSPPI----------AAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEA--RDEDDKLDGVAREAKRRLDQRLR

Query:  SLTKLKEDKKVE
           +    K V+
Subjt:  SLTKLKEDKKVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGAACCCTTCCCGGTGTAGAGTGTGCTCGAAGAAGACGCTGCCGTCAAAACAATCTCCGGTCAGATTCGCCGCCGATCGCTGCCGCACCGGCCTTAACCAGGAG
ATCGGTTCTCTGTTTATACACCAGCAACCACGAAACGCTCCTCGCTTCGAATCTCACTCTGCAGAGATGCTTGTTAGTTGAGGCTCGAGACGAAGACGATAAACTGGACG
GAGTTGCGAGAGAGGCGAAGAGGAGATTGGACCAGCGATTGAGATCGCTAACGAAATTGAAGGAGGATAAGAAAGTTGAGTTGGATCGAGTTGGATTGGATCGTCGTGGA
GCAACAAAATTGTGGTCAGTGCTATGGTTGAAGACGACTTGA
mRNA sequenceShow/hide mRNA sequence
GCAATTTCTTCATTACCTTTCCAATTTACCAAAACTCAAAAACCCAACCAATCATTGCTTTATAAAAAAGACCGACGGAATTTTCGCAAACCAAACCGCTTCTATTCCGC
CGGTTCAGACATCAAATCCCTAAATCCGCGCAGAATTTCATCAAATCCCTAATTCTGTGCAAGTTTCTCCCATGGCTGGAACCCTTCCCGGTGTAGAGTGTGCTCGAAGA
AGACGCTGCCGTCAAAACAATCTCCGGTCAGATTCGCCGCCGATCGCTGCCGCACCGGCCTTAACCAGGAGATCGGTTCTCTGTTTATACACCAGCAACCACGAAACGCT
CCTCGCTTCGAATCTCACTCTGCAGAGATGCTTGTTAGTTGAGGCTCGAGACGAAGACGATAAACTGGACGGAGTTGCGAGAGAGGCGAAGAGGAGATTGGACCAGCGAT
TGAGATCGCTAACGAAATTGAAGGAGGATAAGAAAGTTGAGTTGGATCGAGTTGGATTGGATCGTCGTGGAGCAACAAAATTGTGGTCAGTGCTATGGTTGAAGACGACT
TGATTCTAGTAGGATTCTAGTTTGTTGTATTTGAATCACTGAATTAGAATTGGCCCTAATTTCCTCCAGGTTTTTCGTTAAACTTTGTGATGAAAAGAAAACATTTGTCA
ATATGTCTGAATTGATACAATCATGCTTTAATTCTGGCACTAAAAACAGCCAGTTCTTTGAATACTCTGAGACACTTTTGGTTTATTTGAATGATTCAGATTATACTTGT
CGTCA
Protein sequenceShow/hide protein sequence
MAGTLPGVECARRRRCRQNNLRSDSPPIAAAPALTRRSVLCLYTSNHETLLASNLTLQRCLLVEARDEDDKLDGVAREAKRRLDQRLRSLTKLKEDKKVELDRVGLDRRG
ATKLWSVLWLKTT