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Sed0026684 (gene) of Chayote v1 genome

Gene IDSed0026684
OrganismSechium edule (Chayote v1)
DescriptionCYSTM domain-containing protein
Genome locationLG06:45241315..45243191
RNA-Seq ExpressionSed0026684
SyntenySed0026684
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8026809.1 hypothetical protein BT93_F3328 [Corymbia citriodora subsp. variegata]1.1e-1478.43Show/hide
Query:  APREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        AP  Q MSY+DHVQ+RRE++GCLYACLFTLCCCCCC+ETCECC++ ICCCC
Subjt:  APREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
KAG2616739.1 hypothetical protein PVAP13_3NG249879 [Panicum virgatum]1.6e-1380Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        P  Q MSYYDHVQKR E++GCLYACLFTLCCC CCYETCECC++ ICCCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
KAG2624952.1 hypothetical protein PVAP13_3KG183300 [Panicum virgatum]2.7e-1380Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        P  Q MSYYDHVQKR E++GCLYACLFTLCCC CCYETCECC++ ICCCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
PNT71701.1 hypothetical protein BRADI_2g34048v3 [Brachypodium distachyon]1.2e-1381.63Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC
        P  Q MSYYDHVQKR ED+GCLYACLFTLCCC CCYETCECCV+ +CCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC
XP_008447486.1 PREDICTED: uncharacterized protein LOC103489923 [Cucumis melo]2.8e-1885.71Show/hide
Query:  MAERAAPREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        MA  AAP+EQ MSYYDH+QKRRED+GCLYA LFTLCCCCCCYETCECCVDG+CCCC
Subjt:  MAERAAPREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
TrEMBL top hitse value%identityAlignment
A0A1S3BHJ9 uncharacterized protein LOC1034899231.4e-1885.71Show/hide
Query:  MAERAAPREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        MA  AAP+EQ MSYYDH+QKRRED+GCLYA LFTLCCCCCCYETCECCVDG+CCCC
Subjt:  MAERAAPREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
A0A2K2DBP9 CYSTM domain-containing protein5.9e-1481.63Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC
        P  Q MSYYDHVQKR ED+GCLYACLFTLCCC CCYETCECCV+ +CCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC
A0A2T7E8U3 CYSTM domain-containing protein1.3e-1380Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        P  Q MSYYDHVQKR E++GCLYACLFTLCCC CCYETCECC++ ICCCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
A0A2T8KI25 CYSTM domain-containing protein1.3e-1380Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        P  Q MSYYDHVQKR E++GCLYACLFTLCCC CCYETCECC++ ICCCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
A0A3L6T0N9 Cadmium tolerant 11.3e-1380Show/hide
Query:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
        P  Q MSYYDHVQKR E++GCLYACLFTLCCC CCYETCECC++ ICCCC
Subjt:  PREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52827.1 cadmium tolerance 13.3e-0956Show/hide
Query:  APREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC
        AP +Q M+YYD+V+KR++++GCL+A  + L CCCCCYE C+CC    CCC
Subjt:  APREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAAAGAGCAGCGCCTCGAGAACAAACGATGTCGTACTATGATCATGTCCAGAAACGTAGGGAAGACGAAGGCTGTCTCTATGCTTGTTTGTTTACATTGTGTTG
CTGTTGTTGCTGCTATGAGACTTGTGAGTGTTGTGTGGATGGCATATGTTGCTGCTGCTGA
mRNA sequenceShow/hide mRNA sequence
ATTCAAATAGATCAGAAAATGAAAGAAAATTACAGGTAGCAATGGCGGAAAGAGCAGCGCCTCGAGAACAAACGATGTCGTACTATGATCATGTCCAGAAACGTAGGGAA
GACGAAGGCTGTCTCTATGCTTGTTTGTTTACATTGTGTTGCTGTTGTTGCTGCTATGAGACTTGTGAGTGTTGTGTGGATGGCATATGTTGCTGCTGCTGATCTTAACT
CTGGCCCTCTCAAATGATTCAAATCAATTGCTATGGCTTCTCAAATTGTATTTTCTGGTTTTTTTTTTAATCTTCAGTTACTTAACCAAAATGATTAAGCTCATCATATA
TGTTGATTGATTTAATGTTTCTACAAATCTATTAACTCCATCTTGAAATAAGTTCTTGACTTGTGAGGGTCACTCTGTTGAAATATCTTGAATTATGTTGTACTACGAAT
ACTCCGGAC
Protein sequenceShow/hide protein sequence
MAERAAPREQTMSYYDHVQKRREDEGCLYACLFTLCCCCCCYETCECCVDGICCCC