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Sed0026687 (gene) of Chayote v1 genome

Gene IDSed0026687
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:28651544..28652303
RNA-Seq ExpressionSed0026687
SyntenySed0026687
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051747.1 hypothetical protein E6C27_scaffold60G001390 [Cucumis melo var. makuwa]1.0e-1158.44Show/hide
Query:  RRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKG-----TNEYNHHGCYRSDYNCWSNRKETR
        + VA+++V++L LM MNTFF+VD RHL+LQ E  E +K   E Q  +G     T+EYNHHGCYRSDYNCWSN KET+
Subjt:  RRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKG-----TNEYNHHGCYRSDYNCWSNRKETR
KAG6607148.1 hypothetical protein SDJN03_00490, partial [Cucurbita argyrosperma subsp. sororia]4.7e-1760.22Show/hide
Query:  LQPPTQTFTLKREVSKNTEKMRRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKGTNEYNHHGCYRSDYNCWSNRKETR
        L  PTQTFTLK E      KMRRVA+ +V++ ++  +NT FV D RHLKLQ++R E Q    E +    TNEYNHHGCYRSDYNCWSNRKETR
Subjt:  LQPPTQTFTLKREVSKNTEKMRRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKGTNEYNHHGCYRSDYNCWSNRKETR
TrEMBL top hitse value%identityAlignment
A0A5D3CI92 Uncharacterized protein4.9e-1258.44Show/hide
Query:  RRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKG-----TNEYNHHGCYRSDYNCWSNRKETR
        + VA+++V++L LM MNTFF+VD RHL+LQ E  E +K   E Q  +G     T+EYNHHGCYRSDYNCWSN KET+
Subjt:  RRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKG-----TNEYNHHGCYRSDYNCWSNRKETR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAACTCCACTAAAAAAACTCATATAAATCAATACAAACATTTCTTCCTTCAACCACCAACTCAAACATTCACTCTCAAAAGAGAAGTCAGCAAAAATACTGAGAA
GATGAGACGTGTAGCAATTTCCCTAGTGTTGGTGTTGGTGCTGATGAATATGAACACTTTCTTTGTTGTTGATGCAAGGCATTTGAAGTTGCAAAAAGAAAGGCAAGAAC
AACAGAAGCAAGATGATGAGGACCAAAACTTTAAAGGAACTAATGAATACAATCACCATGGATGCTATAGAAGTGACTATAATTGTTGGAGTAACAGAAAGGAGACAAGA
GTATAG
mRNA sequenceShow/hide mRNA sequence
ATTTTAAAAAACAATTTCTTAAATTTGTGGCCAACCCACTAAACCCTTGCCTTGTTTGGTGGAGATGAAAAACTCCACTAAAAAAACTCATATAAATCAATACAAACATT
TCTTCCTTCAACCACCAACTCAAACATTCACTCTCAAAAGAGAAGTCAGCAAAAATACTGAGAAGATGAGACGTGTAGCAATTTCCCTAGTGTTGGTGTTGGTGCTGATG
AATATGAACACTTTCTTTGTTGTTGATGCAAGGCATTTGAAGTTGCAAAAAGAAAGGCAAGAACAACAGAAGCAAGATGATGAGGACCAAAACTTTAAAGGAACTAATGA
ATACAATCACCATGGATGCTATAGAAGTGACTATAATTGTTGGAGTAACAGAAAGGAGACAAGAGTATAGCTGTTCTTGTCCAAATGCTTATCTATATATGTATAAGAAG
AATATCAAATTTTCTAGCTAGAGTAAGCTAGAAATATGGTGTTTCTTTTTGTACGCTAGGGGGGTTGAGCCTCGGATCTCGAGGTTTATAATGCATCATTAATGTCAGTT
GAGTTATGCTCATTTTGACAGAAGGGTGTATTTGAATGAGGGTGTTTTTGTATATGTAGTATGTTTGTAGGGGTTAATAATGGAAGGATGCATGCAGC
Protein sequenceShow/hide protein sequence
MKNSTKKTHINQYKHFFLQPPTQTFTLKREVSKNTEKMRRVAISLVLVLVLMNMNTFFVVDARHLKLQKERQEQQKQDDEDQNFKGTNEYNHHGCYRSDYNCWSNRKETR
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