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Sed0026688 (gene) of Chayote v1 genome

Gene IDSed0026688
OrganismSechium edule (Chayote v1)
DescriptionLRR receptor-like serine/threonine-protein kinase GSO1-like
Genome locationLG04:42705829..42706155
RNA-Seq ExpressionSed0026688
SyntenySed0026688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607802.1 hypothetical protein SDJN03_01144, partial [Cucurbita argyrosperma subsp. sororia]4.4e-2871.3Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNCL +DG AAARWAGEEWDFLA ++E        DG K+Q  TAA+  EVKIKITKRQLEELLGKVD+ EMSVQQVLAQLI  G    ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSI EVD
Subjt:  LQSIPEVD

XP_022936225.1 uncharacterized protein LOC111442898 [Cucurbita moschata]2.6e-3681.48Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNCL +DG AAA+WAGEEWDFLA E +DGR GLL + EKK+S TAA   EVKIKITKRQLEELLGKVDI EMSVQQVLAQLIGVG+QF ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSIPEVD
Subjt:  LQSIPEVD

XP_022975730.1 uncharacterized protein LOC111475920 [Cucurbita maxima]1.3e-3579.63Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNCL +DG AAA+WAGEEWD LA E +DGR GLL + EKK+S T A   EVKIKITKRQLEELLGKVDI EMSVQQVLAQLIGVG+QF ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSIPEVD
Subjt:  LQSIPEVD

XP_023536165.1 uncharacterized protein LOC111797410 [Cucurbita pepo subsp. pepo]2.9e-3579.63Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNC+ +DG AAA+WAGEEWDFLA E +DGR GLL + EKK+S TAA   EVKIKITKRQLEELLGKVDI EMSVQQVLAQLIGV +QF ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSIPEVD
Subjt:  LQSIPEVD

XP_038896531.1 uncharacterized protein LOC120084782 [Benincasa hispida]9.2e-3473.87Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAA---AREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPW
        MGNCL +D  A A+WAGE+WDFLA E  DG+ GLL DGEKK+   A A   A  VKIKITKRQLEELLGKVDI E+SVQQVLAQLIGVG+QF ESRHR W
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAA---AREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPW

Query:  RPVLQSIPEVD
        RPVLQ IPEVD
Subjt:  RPVLQSIPEVD

TrEMBL top hitse value%identityAlignment
A0A5D2QUV4 Uncharacterized protein1.2e-1847.11Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGEL--EDG-------RTGLLADGEKKQ----SHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGE
        MGNCL     ++ +WAG++W   A +   +DG         G++ D  +K     + +     EVK+KITK+QLEELLG+VD+ E+SVQQVLAQLI V  
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGEL--EDG-------RTGLLADGEKKQ----SHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGE

Query:  QFQESRHRPWRPVLQSIPEVD
        QF E+  R WRP LQSIPEV+
Subjt:  QFQESRHRPWRPVLQSIPEVD

A0A6J1CG88 uncharacterized protein LOC1110105266.2e-2866.67Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTA---AAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPW
        MGNCL +DG AA RWAGEEW FLA              E+KQ   A   AAA EVKIKITK+QLEELLGK D+  +SVQQVLAQLI VG+QF ESRHRPW
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTA---AAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPW

Query:  RPVLQSIPEVD
        RPVLQSIPE+D
Subjt:  RPVLQSIPEVD

A0A6J1FD17 uncharacterized protein LOC1114428981.2e-3681.48Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNCL +DG AAA+WAGEEWDFLA E +DGR GLL + EKK+S TAA   EVKIKITKRQLEELLGKVDI EMSVQQVLAQLIGVG+QF ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSIPEVD
Subjt:  LQSIPEVD

A0A6J1IHJ3 uncharacterized protein LOC1114759206.2e-3679.63Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV
        MGNCL +DG AAA+WAGEEWD LA E +DGR GLL + EKK+S T A   EVKIKITKRQLEELLGKVDI EMSVQQVLAQLIGVG+QF ESRHR WRPV
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPV

Query:  LQSIPEVD
        LQSIPEVD
Subjt:  LQSIPEVD

A0A6P4LWZ9 uncharacterized protein LOC1084523481.2e-1847.11Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGEL--EDG-------RTGLLADGEKKQ----SHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGE
        MGNCL     ++ +WAG++W   A +   +DG         G++ D  +K     + +     EVK+KITK+QLEELLG+VD+ E+SVQQVLAQLI V  
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGEL--EDG-------RTGLLADGEKKQ----SHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGE

Query:  QFQESRHRPWRPVLQSIPEVD
        QF E+  R WRP LQSIPEV+
Subjt:  QFQESRHRPWRPVLQSIPEVD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G20340.1 Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.2.8e-1235.9Show/hide
Query:  MGNCLLKDGAAAARWAGEEWD-FLAGELEDGR--TGLLADGE----KKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQ--VLAQLIGVGEQFQE
        MGNCL  +  +   WAGE+WD F+  + ED    +    DG+     + S ++  + E+KI++TK+QL +LL KV++++++ QQ      ++      + 
Subjt:  MGNCLLKDGAAAARWAGEEWD-FLAGELEDGR--TGLLADGE----KKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQ--VLAQLIGVGEQFQE

Query:  SRHRPWRPVLQSIPEVD
        ++ R WRPVLQSIPEV+
Subjt:  SRHRPWRPVLQSIPEVD

AT4G21920.1 unknown protein1.5e-1029.46Show/hide
Query:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLL----ADGEK----------KQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQL----
        MGNC+         W+G++           R+ ++     DGEK            S +++  RE+KI+ITK++LE+L+  + +  ++ +++L++L    
Subjt:  MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLL----ADGEK----------KQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQL----

Query:  ---IGVGEQFQESRHRPWRPVLQSIPEVD
           IG       + H+PW+PVLQSIPE+D
Subjt:  ---IGVGEQFQESRHRPWRPVLQSIPEVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAACTGTCTTCTGAAAGACGGCGCGGCGGCGGCGCGGTGGGCCGGCGAGGAGTGGGACTTTCTCGCGGGGGAGTTGGAGGACGGCCGGACAGGGCTTCTGGCCGA
CGGCGAGAAGAAACAGAGCCACACGGCGGCGGCGGCGAGGGAGGTGAAGATTAAGATCACGAAGAGGCAGTTGGAGGAGCTGTTGGGGAAGGTGGATATTAACGAGATGT
CCGTACAGCAGGTTTTGGCTCAGTTGATCGGCGTCGGCGAGCAGTTTCAAGAATCGCGCCACCGTCCCTGGCGGCCGGTGTTGCAGAGCATACCGGAAGTTGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCAACTGTCTTCTGAAAGACGGCGCGGCGGCGGCGCGGTGGGCCGGCGAGGAGTGGGACTTTCTCGCGGGGGAGTTGGAGGACGGCCGGACAGGGCTTCTGGCCGA
CGGCGAGAAGAAACAGAGCCACACGGCGGCGGCGGCGAGGGAGGTGAAGATTAAGATCACGAAGAGGCAGTTGGAGGAGCTGTTGGGGAAGGTGGATATTAACGAGATGT
CCGTACAGCAGGTTTTGGCTCAGTTGATCGGCGTCGGCGAGCAGTTTCAAGAATCGCGCCACCGTCCCTGGCGGCCGGTGTTGCAGAGCATACCGGAAGTTGACTGA
Protein sequenceShow/hide protein sequence
MGNCLLKDGAAAARWAGEEWDFLAGELEDGRTGLLADGEKKQSHTAAAAREVKIKITKRQLEELLGKVDINEMSVQQVLAQLIGVGEQFQESRHRPWRPVLQSIPEVD