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Sed0026691 (gene) of Chayote v1 genome

Gene IDSed0026691
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE 3-like
Genome locationLG07:9805988..9806604
RNA-Seq ExpressionSed0026691
SyntenySed0026691
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN74680.1 hypothetical protein VITISV_039715 [Vitis vinifera]2.8e-0634.51Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLT--------------------------EEWP---KEHWEVPDHIRNRKLL
        MT    ES N  +  AR+LP+  + E +R LLQ WF  R+  A   +T LT                            +P   + +W VP+HIR++ +L
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLT--------------------------EEWP---KEHWEVPDHIRNRKLL

Query:  PPKTKRPVGRPKK
        PPKT+RP GRP+K
Subjt:  PPKTKRPVGRPKK

CAN78489.1 hypothetical protein VITISV_004932 [Vitis vinifera]1.2e-0432.26Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKEH----------------------------------------WE
        MT    ES N  +  A++LPI+ + E +R LLQ WF  R+  A   T  LT     +H                                        W 
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKEH----------------------------------------WE

Query:  VPDHIRNRKLLPPKTKRPVGRPKK
        +PD IRNR +LPPKT R VGRP+K
Subjt:  VPDHIRNRKLLPPKTKRPVGRPKK

KAA0051992.1 protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]4.1e-0530.41Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEW--------------------------------------PKEH----
        MT N  ES N+ +L ARELPI SM E++RM+LQ WF  RR+DA+   T+ T+                                         K H    
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEW--------------------------------------PKEH----

Query:  ----------------------WEVPDHIRNRKLLPPKTKRPVGRPKK
                              W++PD I +  +LPP  KR VGRPKK
Subjt:  ----------------------WEVPDHIRNRKLLPPKTKRPVGRPKK

XP_015087064.1 uncharacterized protein LOC107030210 [Solanum pennellii]1.4e-0533.06Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNL-------------------------------TEEWP------KEHWEVPD
        MT+N  E  N+ ++ ARELPI    E +R++   W C  R +A  CT  L                               T E P      K  W +P+
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNL-------------------------------TEEWP------KEHWEVPD

Query:  HIRNRKLLPPKTKRPVGRPKK
        HI    +LPPK KRP GRPKK
Subjt:  HIRNRKLLPPKTKRPVGRPKK

XP_022895264.1 uncharacterized protein LOC111409450 [Olea europaea var. sylvestris]4.8e-0632.23Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNL------------------------TEEWPKE-------------HWEVPD
        MT N+ ES N+ +  ARE PI+++ E IR  +Q WF  RR DA++CT+ L                         +E  K+              W++PD
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNL------------------------TEEWPKE-------------HWEVPD

Query:  HIRNRKLLPPKTKRPVGRPKK
         +R+RK++ P T+R  GRP K
Subjt:  HIRNRKLLPPKTKRPVGRPKK

TrEMBL top hitse value%identityAlignment
A0A0A0LBD9 Uncharacterized protein2.2e-1250.57Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQ-GWFCVRRHDAERCTTNLTEEWPKEH--WEVPDHIRNRKLLPPKTKRPVGRPKK
        MT N  ES NN ++ ARELPI SM E++RM+LQ  WF   R++A    TN T+    +H  W+VPD + +  +LPP  KRPVGRPKK
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQ-GWFCVRRHDAERCTTNLTEEWPKEH--WEVPDHIRNRKLLPPKTKRPVGRPKK

A0A438DAZ2 CCHC-type domain-containing protein7.5e-0531.9Show/hide
Query:  ESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKE--------------------------------------HWEVPDHIRNR
        ES N  +  AR+LP++ + E +R LLQ WF  R+  A   +T LT     E                                       W VP+HIR++
Subjt:  ESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKE--------------------------------------HWEVPDHIRNR

Query:  KLLPPKTKRPVGRPKK
         +LPPKT+RP GRP+K
Subjt:  KLLPPKTKRPVGRPKK

A0A5D3C2C0 Protein FAR1-RELATED SEQUENCE 3-like2.0e-0530.41Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEW--------------------------------------PKEH----
        MT N  ES N+ +L ARELPI SM E++RM+LQ WF  RR+DA+   T+ T+                                         K H    
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEW--------------------------------------PKEH----

Query:  ----------------------WEVPDHIRNRKLLPPKTKRPVGRPKK
                              W++PD I +  +LPP  KR VGRPKK
Subjt:  ----------------------WEVPDHIRNRKLLPPKTKRPVGRPKK

A5AZ68 Uncharacterized protein5.7e-0532.26Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKEH----------------------------------------WE
        MT    ES N  +  A++LPI+ + E +R LLQ WF  R+  A   T  LT     +H                                        W 
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKEH----------------------------------------WE

Query:  VPDHIRNRKLLPPKTKRPVGRPKK
        +PD IRNR +LPPKT R VGRP+K
Subjt:  VPDHIRNRKLLPPKTKRPVGRPKK

A5BJQ2 MULE domain-containing protein1.4e-0634.51Show/hide
Query:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLT--------------------------EEWP---KEHWEVPDHIRNRKLL
        MT    ES N  +  AR+LP+  + E +R LLQ WF  R+  A   +T LT                            +P   + +W VP+HIR++ +L
Subjt:  MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLT--------------------------EEWP---KEHWEVPDHIRNRKLL

Query:  PPKTKRPVGRPKK
        PPKT+RP GRP+K
Subjt:  PPKTKRPVGRPKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAATAATTCATGTGAAAGCTACAACAATCATATACTCTATGCACGTGAGCTTCCAATAGTTTCCATGTTCGAGCTTATTAGAATGTTGTTGCAAGGGTGGTTTTG
TGTGAGAAGACATGATGCAGAAAGGTGTACAACGAACCTGACCGAGGAATGGCCGAAAGAACATTGGGAAGTACCAGATCACATTCGAAATAGAAAGCTTCTTCCTCCGA
AAACTAAACGACCTGTAGGTAGACCAAAGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACCAATAATTCATGTGAAAGCTACAACAATCATATACTCTATGCACGTGAGCTTCCAATAGTTTCCATGTTCGAGCTTATTAGAATGTTGTTGCAAGGGTGGTTTTG
TGTGAGAAGACATGATGCAGAAAGGTGTACAACGAACCTGACCGAGGAATGGCCGAAAGAACATTGGGAAGTACCAGATCACATTCGAAATAGAAAGCTTCTTCCTCCGA
AAACTAAACGACCTGTAGGTAGACCAAAGAAGTAG
Protein sequenceShow/hide protein sequence
MTNNSCESYNNHILYARELPIVSMFELIRMLLQGWFCVRRHDAERCTTNLTEEWPKEHWEVPDHIRNRKLLPPKTKRPVGRPKK