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Sed0026692 (gene) of Chayote v1 genome

Gene IDSed0026692
OrganismSechium edule (Chayote v1)
DescriptionGirdin-like
Genome locationLG04:25208383..25213607
RNA-Seq ExpressionSed0026692
SyntenySed0026692
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044912.1 girdin-like [Cucumis melo var. makuwa]9.4e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

KAA0056623.1 girdin-like [Cucumis melo var. makuwa]4.2e-0749.18Show/hide
Query:  YDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  YDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

KAA0060423.1 uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]3.2e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

KAA0066094.1 girdin-like [Cucumis melo var. makuwa]3.2e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

TYK07552.1 girdin-like [Cucumis melo var. makuwa]2.5e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE+SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

TrEMBL top hitse value%identityAlignment
A0A5A7TNJ1 Girdin-like4.6e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

A0A5A7UL51 Girdin-like2.0e-0749.18Show/hide
Query:  YDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  YDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

A0A5A7UWQ6 Uncharacterized protein1.6e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

A0A5A7VFL0 Girdin-like1.6e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

A0A5D3C8D9 Girdin-like1.2e-0745.83Show/hide
Query:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF
        NMS  +  ++ +DE+SDVL+WAE+M Q+ GD + +S    VL  C      N+L  LK+IWE LTP+RR+ F
Subjt:  NMSTRTP-KNIYDEASDVLEWAEKMHQQHGDSLQSS---DVLPFCYAQVISNELGKLKVIWEGLTPERRYNF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAAACTCGTCAGAGAGAGGAGGAACCGAGAATGGCAACTCAAACAGAGCTCGCGGCGGCGAGCTGAAGCTTGTAGGAAACGCTGCTGGTCGGAGGAGAAGCAG
AATGGAAGCGGCAGCTCGGGCACGGCTTGCTGAAGCAAAAGGTGGCGACAGCGTTCGCCGGAGATGTGATGAGGGCGATAACAAAATGAATTCCAAAATACCCAATATGT
CGACCCGAACACCGAAGAATATATACGATGAGGCAAGTGATGTGCTTGAATGGGCTGAAAAAATGCATCAACAACACGGAGATAGTCTACAATCATCCGATGTACTGCCC
TTTTGTTATGCTCAAGTCATTTCTAATGAATTGGGAAAACTTAAAGTTATCTGGGAAGGCCTGACACCAGAGCGAAGATATAACTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGAAACTCGTCAGAGAGAGGAGGAACCGAGAATGGCAACTCAAACAGAGCTCGCGGCGGCGAGCTGAAGCTTGTAGGAAACGCTGCTGGTCGGAGGAGAAGCAG
AATGGAAGCGGCAGCTCGGGCACGGCTTGCTGAAGCAAAAGGTGGCGACAGCGTTCGCCGGAGATGTGATGAGGGCGATAACAAAATGAATTCCAAAATACCCAATATGT
CGACCCGAACACCGAAGAATATATACGATGAGGCAAGTGATGTGCTTGAATGGGCTGAAAAAATGCATCAACAACACGGAGATAGTCTACAATCATCCGATGTACTGCCC
TTTTGTTATGCTCAAGTCATTTCTAATGAATTGGGAAAACTTAAAGTTATCTGGGAAGGCCTGACACCAGAGCGAAGATATAACTTCTAA
Protein sequenceShow/hide protein sequence
MERNSSERGGTENGNSNRARGGELKLVGNAAGRRRSRMEAAARARLAEAKGGDSVRRRCDEGDNKMNSKIPNMSTRTPKNIYDEASDVLEWAEKMHQQHGDSLQSSDVLP
FCYAQVISNELGKLKVIWEGLTPERRYNF