| GenBank top hits | e value | %identity | Alignment |
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| XP_004141715.1 sm-like protein LSM1B [Cucumis sativus] | 3.2e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| XP_021611176.1 sm-like protein LSM1B [Manihot esculenta] | 9.1e-57 | 89.06 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA EDIYLSTSLA+YLDKK+LVLLRDGRKLLGILRSFDQFANAVLEG+CERVIVGDLY DIPLGLYVIRGENVVL+GELDLE++ELPPHMT VSA E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGT+RKR+EFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| XP_022154301.1 sm-like protein LSM1B [Momordica charantia] | 9.4e-62 | 97.66 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREA+DLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| XP_022964148.1 sm-like protein LSM1B [Cucurbita moschata] | 2.1e-61 | 96.88 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGEL++EK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| XP_023515193.1 sm-like protein LSM1B isoform X1 [Cucurbita pepo subsp. pepo] | 4.7e-61 | 96.09 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGEL++EK+ELPPHMTHVSA+E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0KAS4 U6 snRNA-associated Sm-like protein LSm1 | 1.6e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| A0A1S3CGJ0 U6 snRNA-associated Sm-like protein LSm1 | 1.6e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| A0A5A7V0M1 U6 snRNA-associated Sm-like protein LSm1 | 1.6e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| A0A6J1GSW8 U6 snRNA-associated Sm-like protein LSm1 | 1.6e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| A0A6J1JPU7 U6 snRNA-associated Sm-like protein LSm1 | 1.6e-62 | 98.44 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEK+ELPPHMTHVSAVE
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAEREATDLKGTIRKRLEFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P87173 U6 snRNA-associated Sm-like protein LSm1 | 3.1e-23 | 49.57 | Show/hide |
Query: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKD-ELPPHMTHVSAVEIKKAQKAERE
S SL +Y+D+KV+V+LRDG+KL+GILRSFDQFAN +L+ + ER+ V D+Y DI G+Y++RGENVVLLGELDL+K+ + + + A E+ K E
Subjt: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKD-ELPPHMTHVSAVEIKKAQKAERE
Query: ATDLKGTIRKRLEFL
+ K IR++ ++L
Subjt: ATDLKGTIRKRLEFL
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| Q54W83 Probable U6 snRNA-associated Sm-like protein LSm1 | 2.6e-22 | 46.43 | Show/hide |
Query: LSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVEIKKAQKAERE
+S+ L + +DKK++V+LRDGRK +GI+R+FDQFAN VL+ + ER+ VGD YSD LGL+ IRG+NVV+LGE+D +K+ + +S EI KA E+
Subjt: LSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVEIKKAQKAERE
Query: ATDLKGTIRKRL
+ + +++R+
Subjt: ATDLKGTIRKRL
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| Q5E9Z8 U6 snRNA-associated Sm-like protein LSm1 | 2.6e-22 | 56.57 | Show/hide |
Query: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVEIKKAQKAERE
+ SL +DKK LVLLRDGR L+G LRS DQFAN VL + ER+ VG Y DIP G++V+RGENVVLLGE+DLEK+ P + VS EI + Q+ E++
Subjt: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVEIKKAQKAERE
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| Q8LFL8 Sm-like protein LSM1B | 8.3e-53 | 78.12 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA E+IYLSTSLA+YLD+K+LVLLRDGRKL+G LRSFDQFANAVLEG+CERVIVG+ Y DIPLGLYVIRGENVVL+GELD E++ELPPHM VS E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQK EREA++L+GT+RKR+EFLD D
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| Q945P8 Sm-like protein LSM1A | 6.6e-50 | 76.56 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA+ +DI+ STSLA YLDKK+LVLLRDGRKL+G+LRSFDQFANAVLE + ERVIVGDLY DIPLGLY+IRGENVVL+GELD+EK+ELP HM V E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAE+E LKGT+RKR+EFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G19120.1 Small nuclear ribonucleoprotein family protein | 4.7e-51 | 76.56 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA+ +DI+ STSLA YLDKK+LVLLRDGRKL+G+LRSFDQFANAVLE + ERVIVGDLY DIPLGLY+IRGENVVL+GELD+EK+ELP HM V E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQKAE+E LKGT+RKR+EFLDLD
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| AT1G65700.1 Small nuclear ribonucleoprotein family protein | 6.2e-11 | 41.56 | Show/hide |
Query: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVI-VGDLYSDIPLGLYVIRGENVVLLGELDLEKD
+T L +D+ + V+ DGR ++G+L+ FDQ N +L+ S ERV + LGLY+IRG+N+ ++GELD E D
Subjt: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVI-VGDLYSDIPLGLYVIRGENVVLLGELDLEKD
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| AT1G65700.2 Small nuclear ribonucleoprotein family protein | 6.2e-11 | 41.56 | Show/hide |
Query: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVI-VGDLYSDIPLGLYVIRGENVVLLGELDLEKD
+T L +D+ + V+ DGR ++G+L+ FDQ N +L+ S ERV + LGLY+IRG+N+ ++GELD E D
Subjt: STSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVI-VGDLYSDIPLGLYVIRGENVVLLGELDLEKD
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 5.9e-54 | 78.12 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA E+IYLSTSLA+YLD+K+LVLLRDGRKL+G LRSFDQFANAVLEG+CERVIVG+ Y DIPLGLYVIRGENVVL+GELD E++ELPPHM VS E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQK EREA++L+GT+RKR+EFLD D
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 5.9e-54 | 78.12 | Show/hide |
Query: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
MSWA E+IYLSTSLA+YLD+K+LVLLRDGRKL+G LRSFDQFANAVLEG+CERVIVG+ Y DIPLGLYVIRGENVVL+GELD E++ELPPHM VS E
Subjt: MSWASAEDIYLSTSLANYLDKKVLVLLRDGRKLLGILRSFDQFANAVLEGSCERVIVGDLYSDIPLGLYVIRGENVVLLGELDLEKDELPPHMTHVSAVE
Query: IKKAQKAEREATDLKGTIRKRLEFLDLD
IK+AQK EREA++L+GT+RKR+EFLD D
Subjt: IKKAQKAEREATDLKGTIRKRLEFLDLD
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