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Sed0026772 (gene) of Chayote v1 genome

Gene IDSed0026772
OrganismSechium edule (Chayote v1)
DescriptionHMA domain-containing protein
Genome locationLG08:40027611..40028166
RNA-Seq ExpressionSed0026772
SyntenySed0026772
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151526.2 heavy metal-associated isoprenylated plant protein 34 [Cucumis sativus]9.4e-3868.15Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FGDD   HSSY  S+PYQ++NEQ HW ++  P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP  WP +WP WP+P++Q  +D NQ+N QRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

XP_008449023.1 PREDICTED: uncharacterized protein LOC103491020 isoform X1 [Cucumis melo]4.5e-4070.37Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FG+D   HSSY  S+PY ++NEQ HW ++S P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP PWP IWP WP P++Q  +D NQDNNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

XP_008449024.1 PREDICTED: uncharacterized protein LOC103491020 isoform X2 [Cucumis melo]4.5e-4070.37Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FG+D   HSSY  S+PY ++NEQ HW ++S P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP PWP IWP WP P++Q  +D NQDNNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

XP_038905213.1 uncharacterized protein LOC120091309 isoform X1 [Benincasa hispida]5.5e-3865.93Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHP--YQNHNEQYHWRNQS-PLPPMPPPYPYQLM-----PAP
        MDSEDG+VRICGRVNPRTFLKVIE SGKHAEV+SIRFDGEAGDRRY+P+GDD S+Y LS+P  YQ++ EQ HW +++ P  P P PYP+QLM     P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHP--YQNHNEQYHWRNQS-PLPPMPPPYPYQLM-----PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP P P IWP WP P++Q  ++ N++NNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

XP_038905214.1 heavy metal-associated isoprenylated plant protein 42 isoform X2 [Benincasa hispida]5.5e-3865.93Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHP--YQNHNEQYHWRNQS-PLPPMPPPYPYQLM-----PAP
        MDSEDG+VRICGRVNPRTFLKVIE SGKHAEV+SIRFDGEAGDRRY+P+GDD S+Y LS+P  YQ++ EQ HW +++ P  P P PYP+QLM     P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHP--YQNHNEQYHWRNQS-PLPPMPPPYPYQLM-----PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP P P IWP WP P++Q  ++ N++NNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

TrEMBL top hitse value%identityAlignment
A0A0A0L264 Uncharacterized protein4.6e-3868.15Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FGDD   HSSY  S+PYQ++NEQ HW ++  P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP  WP +WP WP+P++Q  +D NQ+N QRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

A0A1S3BL42 uncharacterized protein LOC103491020 isoform X12.2e-4070.37Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FG+D   HSSY  S+PY ++NEQ HW ++S P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP PWP IWP WP P++Q  +D NQDNNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

A0A1S3BLR2 uncharacterized protein LOC103491020 isoform X22.2e-4070.37Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FG+D   HSSY  S+PY ++NEQ HW ++S P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP PWP IWP WP P++Q  +D NQDNNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

A0A5A7VH99 Chitin-binding lectin 1-like2.2e-4070.37Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP
        MDS+DG+VRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRY+P FG+D   HSSY  S+PY ++NEQ HW ++S P    P PYP+QLM   P P
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHP-FGDD---HSSYDLSHPYQNHNEQYHWRNQS-PLPPMPPPYPYQLM---PAP

Query:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM
        QP PWP IWP WP P++Q  +D NQDNNQRCC VM
Subjt:  QPYPWPTIWPHWPRPEDQPGMDPNQDNNQRCCAVM

A0A6J1EW45 uncharacterized protein LOC1114387282.6e-3362.22Show/hide
Query:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHPYQNHNEQYHWRNQS--PLPPMPP-PYPYQLM---PAPQP
        MDS+DG+VRICGRVNPRTFLKVIE+SGKHAEV+SIRFDGEAGDRRY+P+GDD     + HPYQN  EQ  W + +    PP+PP PYP+Q M   P PQP
Subjt:  MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHPYQNHNEQYHWRNQS--PLPPMPP-PYPYQLM---PAPQP

Query:  YPWPTIWPHWPRPEDQPGMDPNQDNN--QRCCAVM
         PWP I P  P P +    +P+QDNN  QRCC +M
Subjt:  YPWPTIWPHWPRPEDQPGMDPNQDNN--QRCCAVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCAGAGGATGGGACAGTGAGAATCTGTGGAAGGGTGAATCCAAGAACATTCCTAAAAGTGATTGAAAAGTCAGGAAAACATGCAGAGGTTAGAAGTATAAGATT
TGATGGTGAAGCTGGAGACAGAAGATACCACCCTTTTGGAGATGATCACAGTTCTTATGATCTTTCACATCCTTATCAGAACCACAATGAACAATATCACTGGCGCAACC
AATCACCGCTGCCGCCAATGCCGCCACCGTACCCTTATCAACTAATGCCCGCACCGCAGCCGTACCCGTGGCCAACGATATGGCCGCATTGGCCGAGGCCTGAAGATCAA
CCTGGTATGGATCCCAACCAAGATAACAATCAGAGATGCTGTGCTGTTATGTGA
mRNA sequenceShow/hide mRNA sequence
GAGTTGTGTTCTTAGTGCAAGTGTTCAATGTGAAGCATGCAAAGCTAAAGTCCAAGAAATTCTACAAAGCATCCATGGTTTCTCTCTTTCTCTATATTTTTCATCTTTTG
GGCTCTGTGTGTTCTTATTTGTTGGTGTTGGTTTTTGGTTGGAAGGTATTTATACAATCACAATGGATTCAGAGGATGGGACAGTGAGAATCTGTGGAAGGGTGAATCCA
AGAACATTCCTAAAAGTGATTGAAAAGTCAGGAAAACATGCAGAGGTTAGAAGTATAAGATTTGATGGTGAAGCTGGAGACAGAAGATACCACCCTTTTGGAGATGATCA
CAGTTCTTATGATCTTTCACATCCTTATCAGAACCACAATGAACAATATCACTGGCGCAACCAATCACCGCTGCCGCCAATGCCGCCACCGTACCCTTATCAACTAATGC
CCGCACCGCAGCCGTACCCGTGGCCAACGATATGGCCGCATTGGCCGAGGCCTGAAGATCAACCTGGTATGGATCCCAACCAAGATAACAATCAGAGATGCTGTGCTGTT
ATGTGA
Protein sequenceShow/hide protein sequence
MDSEDGTVRICGRVNPRTFLKVIEKSGKHAEVRSIRFDGEAGDRRYHPFGDDHSSYDLSHPYQNHNEQYHWRNQSPLPPMPPPYPYQLMPAPQPYPWPTIWPHWPRPEDQ
PGMDPNQDNNQRCCAVM