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Sed0026781 (gene) of Chayote v1 genome

Gene IDSed0026781
OrganismSechium edule (Chayote v1)
DescriptionVesicle-associated protein 2-2
Genome locationLG08:31689981..31692898
RNA-Seq ExpressionSed0026781
SyntenySed0026781
Gene Ontology termsGO:0005789 - endoplasmic reticulum membrane (cellular component)
InterPro domainsIPR000535 - Major sperm protein (MSP) domain
IPR008962 - PapD-like superfamily
IPR013783 - Immunoglobulin-like fold
IPR016763 - Vesicle-associated membrane-protein-associated protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9611955.1 putative major sperm protein (MSP) [Lupinus albus]2.9e-2557.01Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        M+ V L++++PK+L+F+FEL    T   QLTN T+HYVAFKV TT+PKKY+VQ   GV++P ST E I+ MQ Q+ AP DMV KDKFLI+ST+VP+ TTR
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+ S++
Subjt:  DDITSNM

KAF3972947.1 hypothetical protein CMV_003588 [Castanea mollissima]1.9e-2461.17Show/hide
Query:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT
        QLLDIQPK+L+F+FEL  + +   +L N T HYVAFKV TT+PKKY V+   GVI P ST E  + MQ QRTAP DMVCKDKFLI+ST+VP+ T  +DIT
Subjt:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT

Query:  SNM
         +M
Subjt:  SNM

XP_019439966.1 PREDICTED: vesicle-associated protein 2-2-like isoform X1 [Lupinus angustifolius]5.0e-2556.07Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        M+ V L++++PK+L+F+FEL    T   +LTN T+HYVAFKV TT+PKKY+VQ   GV++P ST E I+ MQ Q+ AP DMV KDKFLI+ST+VP+ TTR
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+ S++
Subjt:  DDITSNM

XP_019439969.1 PREDICTED: vesicle-associated protein 2-2-like isoform X2 [Lupinus angustifolius]5.0e-2556.07Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        M+ V L++++PK+L+F+FEL    T   +LTN T+HYVAFKV TT+PKKY+VQ   GV++P ST E I+ MQ Q+ AP DMV KDKFLI+ST+VP+ TTR
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+ S++
Subjt:  DDITSNM

XP_022143184.1 vesicle-associated protein 1-1-like [Momordica charantia]2.8e-3675.7Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MSL++LL IQPK+L F+FELG  LTSE QL N TQHYVAFKVLTT+PKKY+VQ PNG+I PNST EVI+ MQVQRTAP+DM CKDKFLI+STVVPSWT R
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        ++ITS+M
Subjt:  DDITSNM

TrEMBL top hitse value%identityAlignment
A0A218W368 vesicle-associated protein 2-21.2e-2459.22Show/hide
Query:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT
        QLL+IQP +L+FVFEL        QL N TQH+VAFKV TT+PKKY V+   G+++P ST E  + MQ QR+APTDM+CKDKFLI+STVVP+ TT +DIT
Subjt:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT

Query:  SNM
        + +
Subjt:  SNM

A0A371H0R1 Vesicle-associated protein 2-2 (Fragment)9.1e-2557.01Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MS   +L+I+PK+L+F+FEL    +   QLTN T H+VAFKV TT+PKKY+V+   GV++P +T E I+ MQ QR AP DMVCKDKFLI+STVVP+ TT 
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+TS++
Subjt:  DDITSNM

A0A4P1RLT1 MSP domain-containing protein2.4e-2556.07Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        M+ V L++++PK+L+F+FEL    T   +LTN T+HYVAFKV TT+PKKY+VQ   GV++P ST E I+ MQ Q+ AP DMV KDKFLI+ST+VP+ TTR
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+ S++
Subjt:  DDITSNM

A0A6A4QCE5 Putative major sperm protein (MSP)1.4e-2557.01Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        M+ V L++++PK+L+F+FEL    T   QLTN T+HYVAFKV TT+PKKY+VQ   GV++P ST E I+ MQ Q+ AP DMV KDKFLI+ST+VP+ TTR
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        +D+ S++
Subjt:  DDITSNM

A0A6J1CNK4 vesicle-associated protein 1-1-like1.4e-3675.7Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MSL++LL IQPK+L F+FELG  LTSE QL N TQHYVAFKVLTT+PKKY+VQ PNG+I PNST EVI+ MQVQRTAP+DM CKDKFLI+STVVPSWT R
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
        ++ITS+M
Subjt:  DDITSNM

SwissProt top hitse value%identityAlignment
B9DHD7 Vesicle-associated protein 2-21.4e-2255.88Show/hide
Query:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS
        LLDIQP+ LQF  +L    +   QLTN T HYVAFKV TT+PKKY V+   GV+ P ST E  + MQ  +  P DMVCKDKFLI+ST V + TT +DIT+
Subjt:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS

Query:  NM
        +M
Subjt:  NM

Q84WW5 Vesicle-associated protein 1-32.3e-1745.37Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTN-ITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTT
        M+   L++I P +L+F FEL    +   QLTN  T   VAFKV TTNP+KY V+   GV+LP  +  V + MQ Q+ AP DM CKDKFL+++ VV   TT
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTN-ITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTT

Query:  RDDITSNM
          ++ + M
Subjt:  RDDITSNM

Q8VZ95 Vesicle-associated protein 1-11.0e-2048.6Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MS  +LL ++P  LQF FEL   ++    LTN T + VAFKV TTNPKKY V+   GV+LP ST EV++ MQ Q+ AP+DM CKDKFL++  +     T 
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
         ++T  M
Subjt:  DDITSNM

Q9LVU1 Vesicle-associated protein 2-18.0e-1847.47Show/hide
Query:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDI
        QL+ IQP +L+F+FEL      + ++ N T++YVAFKV TT+PKKY V+   GVI P  +  + + +Q QR  P DM CKDKFL++ST+VP  T  D++
Subjt:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDI

Q9SHC8 Vesicle-associated protein 1-21.4e-1948.54Show/hide
Query:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT
        +LL I P  LQF FEL   ++    L N T +YVAFKV TTNPKKY V+   GV+ P S+ EV++ MQ Q+ AP D+ CKDKFL++  V     T  D+T
Subjt:  QLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDIT

Query:  SNM
          M
Subjt:  SNM

Arabidopsis top hitse value%identityAlignment
AT1G08820.1 vamp/synaptobrevin-associated protein 27-21.0e-2355.88Show/hide
Query:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS
        LLDIQP+ LQF  +L    +   QLTN T HYVAFKV TT+PKKY V+   GV+ P ST E  + MQ  +  P DMVCKDKFLI+ST V + TT +DIT+
Subjt:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS

Query:  NM
        +M
Subjt:  NM

AT1G08820.2 vamp/synaptobrevin-associated protein 27-21.0e-2355.88Show/hide
Query:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS
        LLDIQP+ LQF  +L    +   QLTN T HYVAFKV TT+PKKY V+   GV+ P ST E  + MQ  +  P DMVCKDKFLI+ST V + TT +DIT+
Subjt:  LLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITS

Query:  NM
        +M
Subjt:  NM

AT3G60600.1 vesicle associated protein7.1e-2248.6Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MS  +LL ++P  LQF FEL   ++    LTN T + VAFKV TTNPKKY V+   GV+LP ST EV++ MQ Q+ AP+DM CKDKFL++  +     T 
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
         ++T  M
Subjt:  DDITSNM

AT3G60600.2 vesicle associated protein7.1e-2248.6Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MS  +LL ++P  LQF FEL   ++    LTN T + VAFKV TTNPKKY V+   GV+LP ST EV++ MQ Q+ AP+DM CKDKFL++  +     T 
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
         ++T  M
Subjt:  DDITSNM

AT3G60600.3 vesicle associated protein7.1e-2248.6Show/hide
Query:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR
        MS  +LL ++P  LQF FEL   ++    LTN T + VAFKV TTNPKKY V+   GV+LP ST EV++ MQ Q+ AP+DM CKDKFL++  +     T 
Subjt:  MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTR

Query:  DDITSNM
         ++T  M
Subjt:  DDITSNM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCCTTGTCCAGCTTCTCGATATCCAACCCAAGAAACTTCAATTTGTATTTGAATTAGGAACCTACCTCACCAGTGAATTTCAACTAACAAATATCACCCAACACTA
TGTTGCTTTTAAGGTTTTAACAACAAATCCTAAGAAGTACGCAGTTCAAATGCCAAATGGAGTTATTTTGCCAAATTCAACAGATGAAGTGATAATTAACATGCAAGTTC
AAAGGACAGCTCCAACTGATATGGTTTGTAAAGACAAATTTTTAATCAAAAGTACAGTGGTTCCTTCTTGGACAACAAGAGATGACATCACTTCAAACATGGTAGGAATA
ATGATGCTACTTCAAAAATTAAGAAGTTTTGATAATTACTTTGTTTTTATTATTATTTTTATTTCCTTTTTATTCTTAACCAAATTTAAAAATAAAAACAAGTTTGTGAA
ACTTCATTACCTTTTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCCTTGTCCAGCTTCTCGATATCCAACCCAAGAAACTTCAATTTGTATTTGAATTAGGAACCTACCTCACCAGTGAATTTCAACTAACAAATATCACCCAACACTA
TGTTGCTTTTAAGGTTTTAACAACAAATCCTAAGAAGTACGCAGTTCAAATGCCAAATGGAGTTATTTTGCCAAATTCAACAGATGAAGTGATAATTAACATGCAAGTTC
AAAGGACAGCTCCAACTGATATGGTTTGTAAAGACAAATTTTTAATCAAAAGTACAGTGGTTCCTTCTTGGACAACAAGAGATGACATCACTTCAAACATGGTAGGAATA
ATGATGCTACTTCAAAAATTAAGAAGTTTTGATAATTACTTTGTTTTTATTATTATTTTTATTTCCTTTTTATTCTTAACCAAATTTAAAAATAAAAACAAGTTTGTGAA
ACTTCATTACCTTTTCATTTGA
Protein sequenceShow/hide protein sequence
MSLVQLLDIQPKKLQFVFELGTYLTSEFQLTNITQHYVAFKVLTTNPKKYAVQMPNGVILPNSTDEVIINMQVQRTAPTDMVCKDKFLIKSTVVPSWTTRDDITSNMVGI
MMLLQKLRSFDNYFVFIIIFISFLFLTKFKNKNKFVKLHYLFI