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Sed0026785 (gene) of Chayote v1 genome

Gene IDSed0026785
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG13:13165192..13165560
RNA-Seq ExpressionSed0026785
SyntenySed0026785
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577444.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia]4.5e-4576.86Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  N+ P+SE  FEDWLP MA  LGGEGL+GELC GF+LLMD E GVINLESLKRNAAALGLGD +D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LMDASRYCF QSLRP+  +F
Subjt:  HLMDASRYCFNQSLRPNLTDF

XP_004152909.1 calcium-binding protein KRP1 [Cucumis sativus]9.0e-4676.23Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        M  KN+ P+SE  F+DWLPVMA NLGGEGL+GELC GF+LLMDRE GVIN ESLKRNAAALGLGDL+D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDFF
         LM+ASRYCF++SLR    D F
Subjt:  HLMDASRYCFNQSLRPNLTDFF

XP_022932158.1 calcium-binding protein PBP1-like [Cucurbita moschata]4.5e-4576.86Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  N+ P+SE  FEDWLP MA  LGGEGL+GELC GF+LLMD E GVINLESLKRNAAALGLGD +D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LMDASRYCF QSLRP+  +F
Subjt:  HLMDASRYCFNQSLRPNLTDF

XP_023520447.1 calcium-binding protein PBP1-like [Cucurbita pepo subsp. pepo]1.0e-4476.03Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  N+ P+SE  FEDWLP MA  LGGEGL+GELC GF+LLMD E GVINLESLKRNAAALGLGD +D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LMDASR+CF QSLRP+  +F
Subjt:  HLMDASRYCFNQSLRPNLTDF

XP_038905287.1 calcium-binding protein KRP1-like [Benincasa hispida]2.4e-4676.86Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA+KN+ P+SE RFEDWLP MA NLGGEGL+GELC GF+LLMDRE GVIN ESLKRNAA LGLGDLTD +L  MLREGD+DGDGALN+MEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LM+ASRYCF++ LR    DF
Subjt:  HLMDASRYCFNQSLRPNLTDF

TrEMBL top hitse value%identityAlignment
A0A0A0L2H0 EF-hand domain-containing protein4.4e-4676.23Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        M  KN+ P+SE  F+DWLPVMA NLGGEGL+GELC GF+LLMDRE GVIN ESLKRNAAALGLGDL+D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDFF
         LM+ASRYCF++SLR    D F
Subjt:  HLMDASRYCFNQSLRPNLTDFF

A0A1S3CKV7 calcium-binding protein PBP1-like9.1e-4473.77Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        M + N  P+SE  F+DWLPVMA  LGGEGL+GELC GF+LLMDRE GVIN ESLKRNAAALGLGDL+D +L  MLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDFF
         LM+ASRYCF++SLR    D F
Subjt:  HLMDASRYCFNQSLRPNLTDFF

A0A5A7SII1 Calcium-binding protein PBP1-like9.1e-4473.77Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        M + N  P+SE  F+DWLPVMA  LGGEGL+GELC GF+LLMDRE GVIN ESLKRNAAALGLGDL+D +L  MLREGD +GDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDFF
         LM+ASRYCF++SLR    D F
Subjt:  HLMDASRYCFNQSLRPNLTDFF

A0A6J1F0V4 calcium-binding protein PBP1-like2.2e-4576.86Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  N+ P+SE  FEDWLP MA  LGGEGL+GELC GF+LLMD E GVINLESLKRNAAALGLGD +D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LMDASRYCF QSLRP+  +F
Subjt:  HLMDASRYCFNQSLRPNLTDF

A0A6J1JCW0 calcium-binding protein PBP1-like4.1e-4476.03Show/hide
Query:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP
        MA  N+ P+SE  FEDWLP MA  LGGEGL+GELC GF+LLMD E GVINLESLKRNAAALGLGD +D +L  MLREGD+DGDGALNQMEFCVLMFRLSP
Subjt:  MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSP

Query:  HLMDASRYCFNQSLRPNLTDF
         LMDASRYCF QSLR    +F
Subjt:  HLMDASRYCFNQSLRPNLTDF

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP11.7e-3476.84Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAA-LGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASR
        F D+LP MA NLGGEGL+GELC GF LLMDRE GVI  ESL+RNAAA LGLGDLTD D+  M++EGD+D DGALNQMEFCVLMFRLSP LM+ASR
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAA-LGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASR

Q12798 Centrin-11.1e-0941.86Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLS
        F D+L VM + +  +    E+ K F L  D E+G I+ ++LKR A  LG  +LTD +L EM+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLS

Q9LSQ6 Calcium-binding protein PBP13.5e-3264.76Show/hide
Query:  KNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAA-ALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHL
        +N++P+    F+D+ P MA  LGGEGL+ E+CKGF LLMD++ GVI  ESL+RNA+  LGLGDLTD D+  M+ EGD+D DGALNQMEFCVLMFRLSP L
Subjt:  KNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAA-ALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHL

Query:  MDASR
        M+ASR
Subjt:  MDASR

Q9R1K9 Centrin-26.4e-1041.86Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLS
        F D+L VM + +  +    E+ K F L  D E+G I+ ++LKR A  LG  +LTD +L EM+ E D DGDG +N+ EF  +M + S
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLS

Q9ZPX9 Calcium-binding protein KIC8.6e-2350Show/hide
Query:  EWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASRYCF
        E ++ED LPVMA  +  E  + ELCKGF LL D E  +I  ESL+RN+  LG+  ++  D   M+REGD DGDGALNQ EFCVLM RLSP +M+ +    
Subjt:  EWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASRYCF

Query:  NQSLRPNL
         ++L   L
Subjt:  NQSLRPNL

Arabidopsis top hitse value%identityAlignment
AT2G27030.3 calmodulin 52.0e-0633.33Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMF--RLSPHLMDASR
        F ++L +MAR +       EL + F +    ++G I+   L+     LG   LTD ++ EM++E D DGDG +N  EF  +M   R    +M A R
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMF--RLSPHLMDASR

AT2G46600.1 Calcium-binding EF-hand family protein6.1e-2450Show/hide
Query:  EWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASRYCF
        E ++ED LPVMA  +  E  + ELCKGF LL D E  +I  ESL+RN+  LG+  ++  D   M+REGD DGDGALNQ EFCVLM RLSP +M+ +    
Subjt:  EWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASRYCF

Query:  NQSLRPNL
         ++L   L
Subjt:  NQSLRPNL

AT3G43810.1 calmodulin 72.6e-0635.37Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLM
        F ++L +MAR +       EL + F +    ++G I+   L+     LG   LTD ++ EM+RE D DGDG +N  EF  +M
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLM

AT4G27280.1 Calcium-binding EF-hand family protein1.2e-3576.84Show/hide
Query:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAA-LGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASR
        F D+LP MA NLGGEGL+GELC GF LLMDRE GVI  ESL+RNAAA LGLGDLTD D+  M++EGD+D DGALNQMEFCVLMFRLSP LM+ASR
Subjt:  FEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAA-LGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASR

AT5G54490.1 pinoid-binding protein 12.5e-3364.76Show/hide
Query:  KNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAA-ALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHL
        +N++P+    F+D+ P MA  LGGEGL+ E+CKGF LLMD++ GVI  ESL+RNA+  LGLGDLTD D+  M+ EGD+D DGALNQMEFCVLMFRLSP L
Subjt:  KNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAA-ALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHL

Query:  MDASR
        M+ASR
Subjt:  MDASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCGAAGAATGAGAAGCCCGAATCGGAATGGAGGTTCGAGGATTGGCTGCCGGTGATGGCGAGGAACCTCGGGGGGGAGGGGCTGATGGGAGAGCTGTGCAAGGG
ATTCCATCTGCTGATGGACAGAGAGAGCGGAGTGATCAATTTGGAGAGCCTGAAGAGGAACGCGGCGGCGCTGGGGCTGGGGGATCTCACCGACGGGGACCTCGGGGAAA
TGTTGAGGGAAGGGGATTACGACGGCGATGGCGCTCTCAATCAGATGGAGTTCTGTGTTCTTATGTTCAGATTAAGCCCCCATTTGATGGACGCTTCTCGTTACTGCTTC
AACCAAAGTCTTCGCCCAAACCTTACGGATTTCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCGAAGAATGAGAAGCCCGAATCGGAATGGAGGTTCGAGGATTGGCTGCCGGTGATGGCGAGGAACCTCGGGGGGGAGGGGCTGATGGGAGAGCTGTGCAAGGG
ATTCCATCTGCTGATGGACAGAGAGAGCGGAGTGATCAATTTGGAGAGCCTGAAGAGGAACGCGGCGGCGCTGGGGCTGGGGGATCTCACCGACGGGGACCTCGGGGAAA
TGTTGAGGGAAGGGGATTACGACGGCGATGGCGCTCTCAATCAGATGGAGTTCTGTGTTCTTATGTTCAGATTAAGCCCCCATTTGATGGACGCTTCTCGTTACTGCTTC
AACCAAAGTCTTCGCCCAAACCTTACGGATTTCTTTTGA
Protein sequenceShow/hide protein sequence
MAAKNEKPESEWRFEDWLPVMARNLGGEGLMGELCKGFHLLMDRESGVINLESLKRNAAALGLGDLTDGDLGEMLREGDYDGDGALNQMEFCVLMFRLSPHLMDASRYCF
NQSLRPNLTDFF