CuGenDBv2

Gene ID	Sed0026813
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S26
Genome location	LG11:35058321..35060641
RNA-Seq Expression	Sed0026813
Synteny	Sed0026813
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR000892 - Ribosomal protein S26e IPR038551 - Ribosomal protein S26e superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6602587.1 40S ribosomal protein S26-1, partial [Cucurbita argyrosperma subsp. sororia]

2.1e-62

97.62

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRRDD PKPGQPG  PRVGAGAGA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

XP_022134511.1 40S ribosomal protein S26-1-like [Momordica charantia]

3.5e-62

98.37

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAG
        FIRRRDDAPKPGQPGQ PRVGAG
Subjt:  FIRRRDDAPKPGQPGQPPRVGAG

XP_022923523.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

4.1e-63

98.41

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRRDD PKPGQPGQ PRVGAGAGA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

XP_022939944.1 40S ribosomal protein S26-3-like [Cucurbita moschata]

2.7e-62

96.83

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRR+DAPKPGQPGQ PRVGAG GA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

XP_038884330.1 40S ribosomal protein S26-3-like [Benincasa hispida]

1.0e-61

91.24

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRR REPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR
        FIRRRDDAPKPGQPGQ PRVGAG         G PPR
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1BXZ8 40S ribosomal protein S26

1.7e-62

98.37

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAG
        FIRRRDDAPKPGQPGQ PRVGAG
Subjt:  FIRRRDDAPKPGQPGQPPRVGAG

A0A6J1E9V7 40S ribosomal protein S26

2.0e-63

98.41

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRRDD PKPGQPGQ PRVGAGAGA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

A0A6J1FIL8 40S ribosomal protein S26

1.3e-62

96.83

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRR+DAPKPGQPGQ PRVGAG GA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

A0A6J1JRW7 40S ribosomal protein S26

2.0e-63

98.41

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRRDD PKPGQPGQ PRVGAGAGA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

A0A6J1K0V7 40S ribosomal protein S26

1.3e-62

96.83

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKR+PPQR
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGA
        FIRRR+DAPKPGQPGQ PRVGAG GA
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGA

SwissProt top hits

e value

%identity

Alignment

O45499 40S ribosomal protein S26

1.1e-37

67.8

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRN GRNK  RGHV FIRC+NCG+CCPKDKAIK+F+VRNIVE AAVRD+ +A  Y QY LPKLY K+ YC++CAIHS VVR RSR  RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPP
        F  +R  A +PG PG  P
Subjt:  FIRRRDDAPKPGQPGQPP

P49206 40S ribosomal protein S26-1

3.4e-52

78.1

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR
        F RR++D PKPGQPGQ PR        AG GA   PR
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR

P49216 40S ribosomal protein S26

3.3e-47

74.07

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKHGRGHVK+IRCSNC KCCPKDKAIKRF VRNIVEQAA+RDVQEACV+D Y LPKLYAK+ +CVSCAIH+H+VRVRSR +RR R PP+R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGP
        F RRR+D P      Q PR G GA A  GA A  P
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGP

Q8LPJ7 40S ribosomal protein S26-2

1.5e-52

78.83

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR
        F RR++D PKPGQPGQ PR      AG GA A   PR
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR

Q9LYK9 40S ribosomal protein S26-3

1.5e-52

80.77

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGA
        F RR++D PKP QPGQ PR   GA A   A
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGA

Arabidopsis top hits

e value

%identity

Alignment

AT2G40510.1 Ribosomal protein S26e family protein

1.1e-53

78.83

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR
        F RR++D PKPGQPGQ PR      AG GA A   PR
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR

AT2G40590.1 Ribosomal protein S26e family protein

2.4e-53

78.1

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Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHV  IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR
        F RR++D PKPGQPGQ PR        AG GA   PR
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGAGAGGPPR

AT3G56340.1 Ribosomal protein S26e family protein

1.1e-53

80.77

Show/hide

Query:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR
        MTFKRRNGGRNKH RGHVK IRCSNCGKCCPKDKAIKRF+VRNIVEQAA+RDVQEA VY+ YTLPKLYAK QYCVSCAIHSHVVRVRSRT+RR R PP R
Subjt:  MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQR

Query:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGA
        F RR++D PKP QPGQ PR   GA A   A
Subjt:  FIRRRDDAPKPGQPGQPPRVGAGAGAGAGA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGTCATGTCAAATTCATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGATAAGGCCATCAA
GAGGTTCCTTGTCAGGAACATTGTTGAGCAGGCAGCCGTTAGGGATGTTCAGGAAGCTTGTGTCTATGACCAATACACACTTCCCAAGCTATATGCTAAGATGCAGTACT
GTGTTTCCTGTGCTATCCACTCCCACGTCGTGAGAGTTCGATCACGCACTGACAGGAGGAAGCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATGCGCCTAAG
CCTGGACAGCCAGGACAGCCCCCTCGTGTTGGTGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGCTGGAGGTCCTCCCCGTACTTGA

mRNA sequence

Show/hide mRNA sequence

CATTCTCAAAACCTAGCTCCTCTCTGATTCTCGTCCATCTGAAAGGCAACCATGACTTTCAAGCGCAGGAATGGTGGACGCAACAAGCATGGACGCGGTCATGTCAAATT
CATCCGCTGCTCCAACTGCGGCAAATGCTGCCCCAAGGATAAGGCCATCAAGAGGTTCCTTGTCAGGAACATTGTTGAGCAGGCAGCCGTTAGGGATGTTCAGGAAGCTT
GTGTCTATGACCAATACACACTTCCCAAGCTATATGCTAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCCCACGTCGTGAGAGTTCGATCACGCACTGACAGGAGG
AAGCGTGAGCCTCCACAGCGCTTCATTAGACGCAGGGATGATGCGCCTAAGCCTGGACAGCCAGGACAGCCCCCTCGTGTTGGTGCTGGAGCTGGAGCTGGAGCTGGAGC
TGGAGCTGGAGGTCCTCCCCGTACTTGAAGGAATCTCCTATATGCTATTTAGTTTTCTTGTTCAAATTCTGCAGACTTCAATTTTATTTAGGTCTTCTCGATATTTTGAG
AGTTTTAATTTGAGTTATCAAATTATGATGTACTTCTGACATTATCAAAGTTTTTGGTTTTACAAGGTCTTTTTTTATGCAGACTCAATGATCCATCTATCTCTTGATTT
TCTGTGAATCTTCGATCTATAAATAATTTGACTTGATTTTAGGTCAAATTCTGTTAGTGGTATCTGGGATTGGCTGCTATTCTTC

Protein sequence

Show/hide protein sequence

MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYDQYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDDAPK
PGQPGQPPRVGAGAGAGAGAGAGGPPRT

Sed0026813 (gene) of Chayote v1 genome