CuGenDBv2

Gene ID	Sed0026824
Organism	Sechium edule (Chayote v1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Genome location	LG10:31047276..31049451
RNA-Seq Expression	Sed0026824
Synteny	Sed0026824
Gene Ontology terms	NA
InterPro domains	IPR019188 - Small nuclear RNA activating complex (SNAPc), subunit SNAP43

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022143014.1 uncharacterized protein LOC111013003 [Momordica charantia]

4.3e-126

80.68

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPFRLD+DELI EYAEGG+TSF D+K VW GR+FTYIFEAAPS NLAFFMQSMYAQSIGHMV TASL RRLGG Y LY LYETQPFKP +KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE+NV VASAV KRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLF+DTPIED+IHMDLGME+G N LKKMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALYEAS+I+DVQDIKHISE ++L GDTVE+I E WNVQ  +F EQTGL++QLVPVE H+E  LL          HHADE+FDKELERMLTD+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

XP_022965853.1 uncharacterized protein LOC111465616 [Cucurbita maxima]

2.4e-124

80.68

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINEYAEGGFTSF D+KKVWIGR+FTYIFEAAP  NLAFFMQSMYAQ+IGHMVSTASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKEL+V+AKE+NV VASAVVKRMLEKNMFLFGSVDMNE+SALETVNQLTELQNARI+VAY+KLFADTPIED+IHM+LGME G N LKKMS+DY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KK+ALYEASEIVDVQDIKHISE E L GDTVEKI E+WNVQ  +F EQ G +QQL  VE HEEQ            EHHADE+FD ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

XP_023536865.1 uncharacterized protein LOC111798120 [Cucurbita pepo subsp. pepo]

3.1e-124

81.36

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINEYAEGGFTSF D+KKVWIGR+FTYIFEAAP  NLAFFMQSMYAQ+IGHMVSTASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKEL+V+AKE+NV VASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAY+KLFADTPIED IHM+LGME G N LKKMS+DY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KK+ALYEASEIVDVQDIKHISE E L GDTVEKI E+WNVQ   F EQ G +QQL  VE HEEQ            EHHADE+FD ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

XP_038890120.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida]

3.9e-127

81.36

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDL+PFRLD+DELINE+AE GFTSFVD+KKVW+GR+FTYIFEAAPSTNLAFFMQS+YAQSI HM+STASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE NV VAS+VVKRMLEKNMFLFGSVDM ES+ALETVNQLTELQNARIQVAYNKLF DTPIE++IHMDLGME+GSN LKKMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALYEASEIVDV DIKHI+E EKL GDTVEKI E+WN+Q   F EQTGL+QQLVPVE            EQLL E HADE+FD+ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

XP_038890126.1 uncharacterized protein LOC120079795 isoform X2 [Benincasa hispida]

3.6e-125

81.02

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDL+PFRLD+DELINE+AE GFTSFVD+KKVW+GR+FTYIFEAAPSTNLAFFMQS+YAQSI HM+STASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE NV VAS+VVKRMLEKNMFLFGSVDM ES+ALETVNQLTELQNARIQVAYNKLF DTPIE++IHMDLGME+GSN LKKMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALY ASEIVDV DIKHI+E EKL GDTVEKI E+WN+Q   F EQTGL+QQLVPVE            EQLL E HADE+FD+ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LL25 Uncharacterized protein

1.3e-123

79.66

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINE+AE GFTSFVD+KKVWIGR+FTYIFEAAPSTNLAFFMQS++AQSI HM+STASLP RLGGLY LY LYETQPF+P +KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE NV V S VVKRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAY KLF DTPI ++IHMDLGME+GSN L KMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHI+E EKL GDTVEKI E+WNVQ  +F EQTGL+QQ VPVE            +Q L E HAD +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

A0A5A7VCA1 Putative mediator of RNA polymerase II transcription subunit 26 isoform X1

2.2e-123

79.32

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINE+AE GFTSF D+KKVWIGR+FTYIFEAAPSTNLAFFMQS++AQSI HM S ASLP RLGGLY LY LYETQPF+P +KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE NV V S VVKRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAYNKLF DTPIE++IHMDLGME+GSN L KMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALYEAS+IVDVQDIKHI+E EKL GDTVEKI E+WNVQ  +F EQTGL+QQL+PVE            +Q L E H D +FDKELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

A0A6J1CN36 uncharacterized protein LOC111013003

2.1e-126

80.68

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPFRLD+DELI EYAEGG+TSF D+K VW GR+FTYIFEAAPS NLAFFMQSMYAQSIGHMV TASL RRLGG Y LY LYETQPFKP +KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKELVVDAKE+NV VASAV KRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLF+DTPIED+IHMDLGME+G N LKKMSTDY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KKLALYEAS+I+DVQDIKHISE ++L GDTVE+I E WNVQ  +F EQTGL++QLVPVE H+E  LL          HHADE+FDKELERMLTD+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

A0A6J1FIY6 uncharacterized protein LOC111444339

2.2e-123

80.34

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINEYAEGGFTSF D+KKVWIGR+FTYIFEAAP  NLAFFMQSMYAQ+IGHMVSTASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKEL+V+AKE+ V VASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARI+VAY+KLFADTPIED IHM+LGME G N LKKMS+DY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KK+ALYEAS+IVDVQDIKHISE E L GDTVEKI E+WNVQ  +F EQ G +QQL  VE HEEQ            EHHADE+FD ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

A0A6J1HQ65 uncharacterized protein LOC111465616

1.1e-124

80.68

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        MDLSPFRLD+DELINEYAEGGFTSF D+KKVWIGR+FTYIFEAAP  NLAFFMQSMYAQ+IGHMVSTASL  RLGGLY LY LYETQPFKP++KIYLSIG
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        ELKKLKEL+V+AKE+NV VASAVVKRMLEKNMFLFGSVDMNE+SALETVNQLTELQNARI+VAY+KLFADTPIED+IHM+LGME G N LKKMS+DY+EA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV
        KK+ALYEASEIVDVQDIKHISE E L GDTVEKI E+WNVQ  +F EQ G +QQL  VE HEEQ            EHHADE+FD ELERMLTDV
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G53270.1 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

3.8e-80

52.22

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPF+ D+DELI+E+ E   T+F D+K VW+ R+F++I+EA+P++NLAFFMQS+Y  +IGHMVS  S  RRLGGLY LY L+E QPFKP F+IY+S+ 
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        EL K ++LVV+AK++ V +A+AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  FIH+D+G E+  N+L KMS +YAEA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT
        KK A+  A EI+++ DIKHISE ++L G+ +EK+ EEW+ Q   F EQT L+      ++      L N       EH  D+ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT

AT3G53270.2 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

3.8e-80

52.22

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPF+ D+DELI+E+ E   T+F D+K VW+ R+F++I+EA+P++NLAFFMQS+Y  +IGHMVS  S  RRLGGLY LY L+E QPFKP F+IY+S+ 
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        EL K ++LVV+AK++ V +A+AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  FIH+D+G E+  N+L KMS +YAEA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT
        KK A+  A EI+++ DIKHISE ++L G+ +EK+ EEW+ Q   F EQT L+      ++      L N       EH  D+ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT

AT3G53270.3 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

3.8e-80

52.22

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPF+ D+DELI+E+ E   T+F D+K VW+ R+F++I+EA+P++NLAFFMQS+Y  +IGHMVS  S  RRLGGLY LY L+E QPFKP F+IY+S+ 
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        EL K ++LVV+AK++ V +A+AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  FIH+D+G E+  N+L KMS +YAEA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT
        KK A+  A EI+++ DIKHISE ++L G+ +EK+ EEW+ Q   F EQT L+      ++      L N       EH  D+ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT

AT3G53270.4 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

3.8e-80

52.22

Show/hide

Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPF+ D+DELI+E+ E   T+F D+K VW+ R+F++I+EA+P++NLAFFMQS+Y  +IGHMVS  S  RRLGGLY LY L+E QPFKP F+IY+S+ 
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        EL K ++LVV+AK++ V +A+AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  FIH+D+G E+  N+L KMS +YAEA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT
        KK A+  A EI+++ DIKHISE ++L G+ +EK+ EEW+ Q   F EQT L+      ++      L N       EH  D+ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT

AT3G53270.5 Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein

3.8e-80

52.22

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Query:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG
        M+LSPF+ D+DELI+E+ E   T+F D+K VW+ R+F++I+EA+P++NLAFFMQS+Y  +IGHMVS  S  RRLGGLY LY L+E QPFKP F+IY+S+ 
Subjt:  MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIG

Query:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA
        EL K ++LVV+AK++ V +A+AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  FIH+D+G E+  N+L KMS +YAEA
Subjt:  ELKKLKELVVDAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEA

Query:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT
        KK A+  A EI+++ DIKHISE ++L G+ +EK+ EEW+ Q   F EQT L+      ++      L N       EH  D+ FD EL+R+L+
Subjt:  KKLALYEASEIVDVQDIKHISEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLT

Sequences

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CDS sequence

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ATGGATCTTTCTCCATTCAGGCTTGATGTTGATGAGCTGATCAATGAATATGCTGAGGGTGGGTTTACATCTTTTGTGGATTTGAAGAAAGTATGGATTGGAAGAAGATT
CACTTATATATTTGAGGCTGCTCCTTCTACCAACTTGGCGTTCTTCATGCAATCAATGTATGCTCAATCAATTGGTCACATGGTCAGTACTGCTTCTTTGCCACGCAGAC
TAGGTGGCCTTTATTTCCTTTACATCCTTTATGAGACACAACCGTTTAAGCCTGCTTTCAAAATCTACCTTTCTATTGGAGAGTTAAAGAAACTGAAGGAGCTTGTTGTT
GATGCAAAAGAAGAGAATGTTACTGTGGCATCTGCTGTAGTGAAAAGAATGTTAGAAAAGAACATGTTCCTCTTTGGGTCTGTGGACATGAATGAGAGCTCTGCTTTAGA
AACAGTGAATCAACTAACAGAATTGCAAAATGCTCGCATTCAAGTCGCTTATAATAAGCTGTTTGCTGATACCCCAATAGAAGATTTTATTCATATGGACTTGGGGATGG
AACTTGGTTCAAATGCATTAAAAAAGATGTCAACAGATTATGCAGAGGCCAAGAAACTTGCATTATATGAAGCGAGTGAGATAGTGGATGTACAGGACATAAAACACATA
TCAGAAGGTGAGAAATTGTTTGGAGATACAGTTGAAAAGATCACAGAGGAATGGAACGTACAAAGCAGAATTTTTTGTGAACAAACTGGACTCAACCAACAGCTTGTCCC
AGTTGAGGAACATGAAGAGCAACTTTTACTAGAAAATCACGAAGAGCAACTGTTACCGGAACATCACGCGGATGAAAGTTTTGACAAGGAACTTGAAAGAATGCTTACTG
ATGTTTAA

mRNA sequence

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Protein sequence

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MDLSPFRLDVDELINEYAEGGFTSFVDLKKVWIGRRFTYIFEAAPSTNLAFFMQSMYAQSIGHMVSTASLPRRLGGLYFLYILYETQPFKPAFKIYLSIGELKKLKELVV
DAKEENVTVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIEDFIHMDLGMELGSNALKKMSTDYAEAKKLALYEASEIVDVQDIKHI
SEGEKLFGDTVEKITEEWNVQSRIFCEQTGLNQQLVPVEEHEEQLLLENHEEQLLPEHHADESFDKELERMLTDV

Sed0026824 (gene) of Chayote v1 genome