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Sed0026860 (gene) of Chayote v1 genome

Gene IDSed0026860
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG08:36553617..36553955
RNA-Seq ExpressionSed0026860
SyntenySed0026860
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]7.5e-3168.87Show/hide
Query:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        S NGVV F+D FP+M+++LGVKGF++E++ GF LLMDKEKGVIT ESLR NM F G   ++EE + MVREGDLDGDGALSEAEF ILM KLSP FM LSS
Subjt:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQS
          F QS
Subjt:  HLFPQS

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]7.1e-2964.04Show/hide
Query:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        S   VV F+D FPEM+++LG KGF++E++ GF LLMDKEKGVIT ESLR NM F G   ++EE + MV+EGDLDGDGALSEAEF ILM KLSP FM LSS
Subjt:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQ--SDQNLRK
          F Q  SD+N  K
Subjt:  HLFPQ--SDQNLRK

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]1.8e-4080.95Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        MGS+NGVV FRD FP MV++LGVKGFMEE++ GF LLMDKEKGVIT ESLR  MGFLG DEEEA+GMVREGDLDGDGALSEAEFC+LMFKLSP  MQLS+
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQ
        HLF Q
Subjt:  HLFPQ

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3980Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        MGS+NGVV FRD FP MV++LGVKGFMEE++ GF LLMDKEKGVIT ESLR  M FLG DEEEA+GMVREGDLDGDGALSEAEFC+LMFKLSP  MQLS+
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQ
        HLF Q
Subjt:  HLFPQ

XP_038895967.1 calcium-binding protein PBP1-like [Benincasa hispida]1.5e-3170.19Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQL
        MGS NGVVFF+D FPEMV++LG+KGFM+E++SGF L+MDKEKG+IT ESLR NMGFLG   ++EE + MVREGDLDGDGAL+EAEFCILM +LSP     
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQL

Query:  SSHL
         SHL
Subjt:  SSHL

TrEMBL top hitse value%identityAlignment
A0A0A0LV00 EF-hand domain-containing protein5.8e-2966.04Show/hide
Query:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        S   VV F+D FPEM+++LG KGF++E++ GF LLMDKEKGVIT ESLR NM F G   ++EE + MV+EGDLDGDGALSEAEF ILM KLSP FM LSS
Subjt:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQS
          F QS
Subjt:  HLFPQS

A0A5A7UNY8 Calcium-binding protein PBP13.7e-3168.87Show/hide
Query:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS
        S NGVV F+D FP+M+++LGVKGF++E++ GF LLMDKEKGVIT ESLR NM F G   ++EE + MVREGDLDGDGALSEAEF ILM KLSP FM LSS
Subjt:  SQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSS

Query:  HLFPQS
          F QS
Subjt:  HLFPQS

A0A6J1JUT4 calcium-binding protein KIC-like4.5e-2977.91Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCI
        MGS+N VV FRD FP MV++LGVKGFMEE++ GF LLMDKEKGVIT ESLR  MGFLG +EEEA+GMV EGDLDGDGALSEAEF I
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCI

A0A7N2LV84 EF-hand domain-containing protein3.5e-2658.72Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN---MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ
        MGS+NGVV F D FP MV++LG +GFM+E+ +GF LLMD+EKGVIT +SL+ N   +G  G  +EE + M+REGDLDGDGAL+E EFC LMF+LSP  M+
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN---MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ

Query:  LSSHLFPQS
         SS L  ++
Subjt:  LSSHLFPQS

M5WN12 EF-hand domain-containing protein1.8e-2558.72Show/hide
Query:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ
        M  +NGVV F D FP MV +LG +GFM+E+ +GF LLMD+EKGVIT ESL+ N G LG +   +EE + M+REGDLDGDG+L+E EFC LMF+LSPA MQ
Subjt:  MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ

Query:  LSSHLFPQS
         S  L  ++
Subjt:  LSSHLFPQS

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP12.6e-1849Show/hide
Query:  QNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS
        QN    F D  P M   LG +G + E+ +GF LLMD+EKGVIT ESLR N    +G     +E+   M++EGD D DGAL++ EFC+LMF+LSP  M+ S
Subjt:  QNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS

P41208 Centrin-26.7e-0638.2Show/hide
Query:  GVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLS
        G + F D    M Q++  K   EEI   F L  D E G I+ ++L+     LG    +EE   M+ E D DGDG +SE EF  +M K S
Subjt:  GVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILMFKLS

Q84MN0 Calmodulin-like protein 42.5e-0533.72Show/hide
Query:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM
        NG++ F++    + +++      EE+K  F +L   + G I+   LR  M  LG    +EE   M+RE D DGDG ++  EF I+M
Subjt:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM

Q9LSQ6 Calcium-binding protein PBP11.4e-1952.13Show/hide
Query:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS
        F+D FP M  +LG +G +EEI  GF LLMDK+KGVIT ESLR N    +G     +++   M+ EGD D DGAL++ EFC+LMF+LSP  M+ S
Subjt:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS

Q9ZPX9 Calcium-binding protein KIC3.6e-2051.65Show/hide
Query:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ
        + D+ P M +++ V+ F+ E+  GF+LL D E+ +IT ESLR N G LG +   +E+A GMVREGDLDGDGAL++ EFC+LM +LSP  M+
Subjt:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 41.2e-0532.56Show/hide
Query:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM
        NG + F +    M +++      EE+K  F +    + G I+   LR  M  LG    +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM

AT1G66410.2 calmodulin 41.2e-0532.56Show/hide
Query:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM
        NG + F +    M +++      EE+K  F +    + G I+   LR  M  LG    +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLG--FDEEEALGMVREGDLDGDGALSEAEFCILM

AT2G46600.1 Calcium-binding EF-hand family protein2.6e-2151.65Show/hide
Query:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ
        + D+ P M +++ V+ F+ E+  GF+LL D E+ +IT ESLR N G LG +   +E+A GMVREGDLDGDGAL++ EFC+LM +LSP  M+
Subjt:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFD---EEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQ

AT4G27280.1 Calcium-binding EF-hand family protein1.9e-1949Show/hide
Query:  QNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS
        QN    F D  P M   LG +G + E+ +GF LLMD+EKGVIT ESLR N    +G     +E+   M++EGD D DGAL++ EFC+LMF+LSP  M+ S
Subjt:  QNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS

AT5G54490.1 pinoid-binding protein 19.8e-2152.13Show/hide
Query:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS
        F+D FP M  +LG +G +EEI  GF LLMDK+KGVIT ESLR N    +G     +++   M+ EGD D DGAL++ EFC+LMF+LSP  M+ S
Subjt:  FRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRIN----MGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCACAAAACGGGGTCGTTTTCTTCAGAGATTTGTTCCCTGAAATGGTGCAGAGATTGGGAGTGAAAGGGTTCATGGAGGAAATCAAATCTGGATTTGCTTTGTT
GATGGATAAAGAAAAGGGAGTTATAACAGTGGAGAGCTTGAGAATAAATATGGGGTTTTTGGGATTTGATGAAGAAGAAGCTTTGGGAATGGTGAGAGAAGGGGATTTGG
ATGGAGATGGAGCTTTGAGTGAGGCTGAATTTTGCATTCTCATGTTCAAACTTAGCCCTGCATTCATGCAATTATCTTCACATTTGTTTCCCCAATCTGATCAAAACCTT
AGGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCACAAAACGGGGTCGTTTTCTTCAGAGATTTGTTCCCTGAAATGGTGCAGAGATTGGGAGTGAAAGGGTTCATGGAGGAAATCAAATCTGGATTTGCTTTGTT
GATGGATAAAGAAAAGGGAGTTATAACAGTGGAGAGCTTGAGAATAAATATGGGGTTTTTGGGATTTGATGAAGAAGAAGCTTTGGGAATGGTGAGAGAAGGGGATTTGG
ATGGAGATGGAGCTTTGAGTGAGGCTGAATTTTGCATTCTCATGTTCAAACTTAGCCCTGCATTCATGCAATTATCTTCACATTTGTTTCCCCAATCTGATCAAAACCTT
AGGAAATAG
Protein sequenceShow/hide protein sequence
MGSQNGVVFFRDLFPEMVQRLGVKGFMEEIKSGFALLMDKEKGVITVESLRINMGFLGFDEEEALGMVREGDLDGDGALSEAEFCILMFKLSPAFMQLSSHLFPQSDQNL
RK