; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026890 (gene) of Chayote v1 genome

Gene IDSed0026890
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent Clp protease proteolytic subunit
Genome locationLG04:8158020..8162676
RNA-Seq ExpressionSed0026890
SyntenySed0026890
Gene Ontology termsGO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009368 - endopeptidase Clp complex (cellular component)
GO:0009526 - plastid envelope (cellular component)
GO:0009570 - chloroplast stroma (cellular component)
GO:0004176 - ATP-dependent peptidase activity (molecular function)
GO:0004252 - serine-type endopeptidase activity (molecular function)
GO:0051117 - ATPase binding (molecular function)
InterPro domainsIPR001907 - ATP-dependent Clp protease proteolytic subunit
IPR023562 - Clp protease proteolytic subunit /Translocation-enhancing protein TepA
IPR029045 - ClpP/crotonase-like domain superfamily
IPR033135 - ClpP, histidine active site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7015794.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]1.2e-13689.46Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLAP  SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

XP_008448589.1 PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Cucumis melo]5.3e-13789.12Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+P AS LGLPNSHGKPSNF+PKLKS+LSFPS+SS      LK +RTL PP S VM+APQTPD++RRGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVID+DSIIPL PVPERVKA+LNYEE+ KDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

XP_022145352.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Momordica charantia]8.2e-13889.8Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS L LPNSH KPSNFYPKLKSSLSFPS+ S      LK +RTLA P SV+M+APQTPD ARRGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

XP_022923515.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic-like [Cucurbita moschata]1.0e-13589.12Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLA   SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

XP_038876611.1 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Benincasa hispida]1.8e-13789.46Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSSPVL----KSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+LLPHAS +GLP SHGKPSNF PKLKS+LSFPS+SS +     K +RT APP SV+M+APQTPD+ARRGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSSPVL----KSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDP KFL PD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

TrEMBL top hitse value%identityAlignment
A0A1S3BJF4 ATP-dependent Clp protease proteolytic subunit2.6e-13789.12Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+P AS LGLPNSHGKPSNF+PKLKS+LSFPS+SS      LK +RTL PP S VM+APQTPD++RRGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNN+TRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVID+DSIIPL PVPERVKA+LNYEE+ KDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

A0A6J1CWB9 ATP-dependent Clp protease proteolytic subunit4.0e-13889.8Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS L LPNSH KPSNFYPKLKSSLSFPS+ S      LK +RTLA P SV+M+APQTPD ARRGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS GGSLSATMAIYDVVQLVRADVSTI LGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNN+TRIISEFTGHPF+KVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNYEEI KDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

A0A6J1EC18 ATP-dependent Clp protease proteolytic subunit4.9e-13689.12Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKSSLSFPS+SS       K +RTLA   SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KFL+PD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

A0A6J1FAG6 ATP-dependent Clp protease proteolytic subunit1.1e-13286.73Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS L LPNSHGK S FYPK KSSLSFPSSSS      LK +RTLAPP SV+M+ PQTPDSAR GAETDAMGLLLRERIVFLG +IDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAI DV+QLVRADVSTIALGIAASTASIILGGGTKGKR AMPNARIMVHQPLGG SGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNNI RIIS +TGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKD+IIPL  +PERVKA+LNYEEI KDPRKFLTPD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

A0A6J1HNH6 ATP-dependent Clp protease proteolytic subunit3.2e-13588.1Show/hide
Query:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD
        MELLSRCS+L+PHAS LGL NSHGKPSNFYPKLKS LSFPS+SS       K +RTLA   SV M+ PQTPD+A+RGAETDAMGLLLRERIVFLG SIDD
Subjt:  MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSS----PVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDD

Query:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
        FVADAI+SQLLLLDAQDSTKDIRLFINS+GGSLSATMAIYDV+QLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI
Subjt:  FVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEI

Query:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSP+EAVEYGLIDGVIDKDSIIPL PVPERVKASLNY EI KDP+KF +PD+PDDEIY
Subjt:  QAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

SwissProt top hitse value%identityAlignment
O34125 ATP-dependent Clp protease proteolytic subunit 25.0e-5354.45Show/hide
Query:  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERIVFLGT +DD VAD+I++QLL L+A+D  KDI+L+INS GGS++A MAIYD +Q V  DV+TI  G+AAS  + +L
Subjt:  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSI
         GG +GKR+A+P+ARIM+HQPLGGA GQA+D+EIQAREI+++K+ +  ++++ TG P EK++ D DRD +MSP EA  YGLID V+ + ++
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSI

Q3ANI8 ATP-dependent Clp protease proteolytic subunit 13.4e-5454.87Show/hide
Query:  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIA
        P S     P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+A
Subjt:  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIA

Query:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID
        AS  + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI++ K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID

Q3B0U1 ATP-dependent Clp protease proteolytic subunit 27.7e-5454.36Show/hide
Query:  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIA
        P S     P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D  KDI++++NS GGS++A +AIYD +Q V  DV TI  G+A
Subjt:  PRSVVMSAPQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIA

Query:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID
        AS  + +L GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P +K+ +D DRD ++SP EAVEYGLID V+D
Subjt:  ASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID

Q7V992 ATP-dependent Clp protease proteolytic subunit 13.8e-5355.61Show/hide
Query:  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL
        P   + + RG    D    LLRERI+FLGT +DD VADA+++Q+L L+A+D  KDI+++INS GGS++A +AIYD +Q V  DV TI  G+AAS  + +L
Subjt:  PQTPDSARRGAET-DAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIIL

Query:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID
         GGTKGKRLA+PNARIM+HQPLGGA GQA+D+EIQA+EI+  K  +  +++E TG P  K+ +D DRD ++SP +AVEYGLID V+D
Subjt:  GGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVID

Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic1.7e-10172.7Show/hide
Query:  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLL
        KPS    +L SS S  SSS P      LK  + ++PP      +P           QT +SA RGAE+D MGLLLRERIVFLG+SIDDFVADAIMSQLLL
Subjt:  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLL

Query:  LDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNI
        LDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNN+
Subjt:  LDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNI

Query:  TRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        T II+  T   FE+V KDIDRDRYMSP+EAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEI KDP KFLTP+IPDDEIY
Subjt:  TRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY

Arabidopsis top hitse value%identityAlignment
AT1G02560.1 nuclear encoded CLP protease 56.7e-4552.1Show/hide
Query:  LLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH
        L + RI+  G ++DD +A+ I++QLL LDA D TKDI +++NS GGS++A MAI+D ++ +R DVST+ +G+AAS  + +L  GTKGKR ++PN+RIM+H
Subjt:  LLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVH

Query:  QPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVI
        QPLGGA G   D++IQA E++H+K N+   ++  TG   EK+ +D DRD +MS  EA EYGLIDGVI
Subjt:  QPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVI

AT1G11750.1 CLP protease proteolytic subunit 61.6e-3839.13Show/hide
Query:  SNFYPKLKSSLSFPSSSSPVLKSARTLAPPRSVVMSA-----PQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLF
        S +   LK+ LS   S SP+    +    PR  V+ A     P  P     G   D   +L R RI+F+G  I+  VA  ++SQL+ L + D   DI ++
Subjt:  SNFYPKLKSSLSFPSSSSPVLKSARTLAPPRSVVMSA-----PQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKDIRLF

Query:  INSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFE
        +N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ + FTG P E
Subjt:  INSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPFE

Query:  KVQKDIDRDRYMSPMEAVEYGLIDGVIDKD
        KVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  KVQKDIDRDRYMSPMEAVEYGLIDGVIDKD

AT1G11750.2 CLP protease proteolytic subunit 61.3e-3738.03Show/hide
Query:  NSHGKPSNFYPKLKSSLSFPSSSSPVLKSART---LAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKD
        N  G P     K  SSL  P  +  +LKS+          +   + P  P     G   D   +L R RI+F+G  I+  VA  ++SQL+ L + D   D
Subjt:  NSHGKPSNFYPKLKSSLSFPSSSSPVLKSART---LAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLDAQDSTKD

Query:  IRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTG
        I +++N  GGS  + +AIYD +  ++  V T+A G+AAS  +++L GG KG R AMPN R+M+HQP  G  G   DV  Q  E +  +  I R+ + FTG
Subjt:  IRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTG

Query:  HPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKD
         P EKVQ+  +RDR++S  EA+E+GLIDG+++ +
Subjt:  HPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKD

AT1G66670.1 CLP protease proteolytic subunit 31.4e-5044.53Show/hide
Query:  ASPLGLPNSHGKPSNF------YPKLKSSLSFPSSSSPVLKSARTLAPPRSV----VMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIM
        ++P+ L N  GK  NF       PK        SS S      +TL+    V    + S  Q+P       E D   +LLR+RIVFLG+ +DD  AD ++
Subjt:  ASPLGLPNSHGKPSNF------YPKLKSSLSFPSSSSPVLKSARTLAPPRSV----VMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIM

Query:  SQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMH
        SQLLLLDA+DS +DI LFINS GGS++A M IYD ++  +ADVST+ LG+AAS  + +L  G+KGKR  MPN+++M+HQPLG A G+A ++ I+ RE+M+
Subjt:  SQLLLLDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMH

Query:  NKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPV
        +K  + +I S  TG P  +++ D DRD +++P EA EYGLID VID      +AP+
Subjt:  NKNNITRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPV

AT5G45390.1 CLP protease P41.2e-10272.7Show/hide
Query:  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLL
        KPS    +L SS S  SSS P      LK  + ++PP      +P           QT +SA RGAE+D MGLLLRERIVFLG+SIDDFVADAIMSQLLL
Subjt:  KPSNFYPKLKSSLSFPSSSSP-----VLKSARTLAPPRSVVMSAP-----------QTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLL

Query:  LDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNI
        LDA+D  KDI+LFINS GGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILG GTKGKR AMPN RIM+HQPLGGASGQAIDVEIQA+E+MHNKNN+
Subjt:  LDAQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNI

Query:  TRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY
        T II+  T   FE+V KDIDRDRYMSP+EAVEYGLIDGVID DSIIPL PVP+RVK  +NYEEI KDP KFLTP+IPDDEIY
Subjt:  TRIISEFTGHPFEKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTTCTTTCACGCTGTTCTTCTCTTCTTCCTCACGCATCCCCTCTCGGCCTTCCAAATTCTCATGGAAAACCTTCAAATTTCTACCCAAAGCTCAAATCCAGCCT
CTCCTTTCCTTCCTCTTCTTCGCCAGTCCTCAAATCTGCCAGAACCCTAGCTCCGCCGCGCTCCGTCGTCATGTCCGCTCCTCAGACGCCGGATTCCGCCCGGAGAGGCG
CCGAGACGGACGCCATGGGGCTGCTTCTCCGGGAGAGGATCGTCTTCTTGGGGACCAGCATTGATGACTTTGTGGCCGATGCCATTATGAGCCAGCTCCTGCTCTTGGAT
GCTCAGGATTCTACTAAGGATATCAGGCTCTTCATCAACTCCACCGGCGGCTCTCTCAGTGCTACAATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTC
CACTATTGCACTAGGAATCGCGGCCTCAACTGCTTCCATAATCCTCGGCGGTGGAACTAAAGGGAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTACATCAACCCC
TTGGAGGGGCAAGTGGGCAAGCAATAGATGTGGAAATTCAAGCTCGTGAAATCATGCATAACAAGAACAACATAACAAGAATCATCTCCGAATTCACTGGCCATCCATTT
GAAAAAGTCCAGAAAGATATTGATAGGGATCGTTATATGTCGCCCATGGAGGCTGTAGAATATGGATTGATTGATGGGGTGATCGACAAAGACAGCATTATACCTCTCGC
GCCAGTGCCAGAAAGAGTGAAGGCAAGTTTAAATTATGAAGAAATTATTAAAGATCCAAGGAAATTCTTGACACCAGATATCCCCGACGACGAGATTTACTAG
mRNA sequenceShow/hide mRNA sequence
AAAACTTTCCCGAATTTGTTATTTTACGCATTTCTCGCCCAACCAAATCCCCAAAACTCATCGTCTCAAAGCACAGAGCAGTGGTAAATCCATGGAGCTTCTTTCACGCT
GTTCTTCTCTTCTTCCTCACGCATCCCCTCTCGGCCTTCCAAATTCTCATGGAAAACCTTCAAATTTCTACCCAAAGCTCAAATCCAGCCTCTCCTTTCCTTCCTCTTCT
TCGCCAGTCCTCAAATCTGCCAGAACCCTAGCTCCGCCGCGCTCCGTCGTCATGTCCGCTCCTCAGACGCCGGATTCCGCCCGGAGAGGCGCCGAGACGGACGCCATGGG
GCTGCTTCTCCGGGAGAGGATCGTCTTCTTGGGGACCAGCATTGATGACTTTGTGGCCGATGCCATTATGAGCCAGCTCCTGCTCTTGGATGCTCAGGATTCTACTAAGG
ATATCAGGCTCTTCATCAACTCCACCGGCGGCTCTCTCAGTGCTACAATGGCTATCTACGATGTCGTACAGCTCGTGAGGGCTGATGTCTCCACTATTGCACTAGGAATC
GCGGCCTCAACTGCTTCCATAATCCTCGGCGGTGGAACTAAAGGGAAGCGTCTCGCAATGCCTAATGCACGTATTATGGTACATCAACCCCTTGGAGGGGCAAGTGGGCA
AGCAATAGATGTGGAAATTCAAGCTCGTGAAATCATGCATAACAAGAACAACATAACAAGAATCATCTCCGAATTCACTGGCCATCCATTTGAAAAAGTCCAGAAAGATA
TTGATAGGGATCGTTATATGTCGCCCATGGAGGCTGTAGAATATGGATTGATTGATGGGGTGATCGACAAAGACAGCATTATACCTCTCGCGCCAGTGCCAGAAAGAGTG
AAGGCAAGTTTAAATTATGAAGAAATTATTAAAGATCCAAGGAAATTCTTGACACCAGATATCCCCGACGACGAGATTTACTAGTTTCGAGCATTTCGGCAGACCATTTT
CTAGGCTTTTGATTGATTTGATTCACATGTAGTAGAATCTTGTGTAAGCAAAGTCATGGTAAGTGGAACTCACAAATATGCTGGAACTTGATGTCCTCAGCTTTAGAGTA
ACAACTTTGAGCAAAATGTTTTGAACCCTTTTGTCTATTACAATTACAAATTAGCATTCGGAGTAAAAAAAACAAATGGCATTGAATAATCTTTTGTATTGGGCAGTGCT
TTGTCTGATCAGAAACTCAAATGTACAGGCACTGCTTTGCTGCC
Protein sequenceShow/hide protein sequence
MELLSRCSSLLPHASPLGLPNSHGKPSNFYPKLKSSLSFPSSSSPVLKSARTLAPPRSVVMSAPQTPDSARRGAETDAMGLLLRERIVFLGTSIDDFVADAIMSQLLLLD
AQDSTKDIRLFINSTGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGGGTKGKRLAMPNARIMVHQPLGGASGQAIDVEIQAREIMHNKNNITRIISEFTGHPF
EKVQKDIDRDRYMSPMEAVEYGLIDGVIDKDSIIPLAPVPERVKASLNYEEIIKDPRKFLTPDIPDDEIY