CuGenDBv2

Gene ID	Sed0026914
Organism	Sechium edule (Chayote v1)
Description	C2H2-type domain-containing protein
Genome location	LG06:4136623..4141284
RNA-Seq Expression	Sed0026914
Synteny	Sed0026914
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR013087 - Zinc finger C2H2-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7022689.1 hypothetical protein SDJN02_16423, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-132

83.21

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLV+SLL SLR Q VSST PLQS NQGSK+S TES PKQD ++A EVHCSRERSRAAWKI+EEYLM +VDKKK+KISTECRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS
        QEQHK HLDF+DWKCGYCRKRFYEEK+LDQHFDNRHY+LLNVS +KC+ADLCGAL CDHVM++ SQ K+KCNPAA ARNKHMCEALADSCFPI++G  AS
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS

Query:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        HLHEFFLRQFCDAHTC+GKPKPFSRGR VRTSW YVVIS+LT L V+FFYVF+YLY+RGMRT+PQVLKRLSESGRKKKPS
Subjt:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

XP_022928324.1 uncharacterized protein LOC111435184 [Cucurbita moschata]

4.5e-133

84.29

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLV+SLL SLR Q VSSTLPLQS NQGSK+S TES PKQD ++A EVHCSRERSRAAWKI+EEYLM +VDKKK+KISTECRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS
        QEQHK HLDF+DWKCGYCRKRFYEEK+LDQHFDNRHY+LLNVS +KC+ADLCGALHCDHVM++ SQ K+KCNPAA ARNKHMCEALADSCFPI++G  AS
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS

Query:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        HLHEFFLRQFCDAHTC+GKPKPFSRGR VRTSW YVVIS+LT L VLFFYVF+YLY+RGMRT+PQVLKRLSESGRKKKPS
Subjt:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

XP_023526204.1 uncharacterized protein LOC111789755 [Cucurbita pepo subsp. pepo]

7.7e-133

83.87

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLVLSLLL  R   VSSTLPLQS NQGSK+S TESTPKQD +NAHEVHCSRERSRAAWKI+EEYLM +VDKK+YKIST+CRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH
        QEQHK HLDF+DWKCGYC+K+FYEEK+LDQHF NRHY+LLNVS SKCLAD CGALHCD V++T SQK+KCNPAAAARNKHMCE LADSCFPID+G  ASH
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH

Query:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        LHEFFLRQFCDAHTC+GKPKPFSRGR VRTS FYVVIS+LT +FVLFFYVFIYLY+RGMRT+PQVLKRLS+SG KKKPS
Subjt:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

XP_023532028.1 uncharacterized protein LOC111794116 [Cucurbita pepo subsp. pepo]

3.7e-135

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLV+SLL SLR Q VSSTLPLQS NQGSK+S TES PKQD ++A EVHCSRERSRAAWKI+EEYLM +VDKKK+KISTECRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS
        QEQHK HLDF+DWKCGYCRKRFYEEK+LDQHFDNRHY+LLNVS +KC+ADLCGALHCDHVM++ SQ K+KCNPAAAARNKHMCEALADSCFPI+EG  AS
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS

Query:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        HLHEFFLRQFCDAHTC+GKPKPFSRGR VRTSW YVVIS+LT L VLFFYVF+YLY+RGMRT+PQVLKRLSESGRKKKPS
Subjt:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

XP_038891552.1 uncharacterized protein LOC120080934 [Benincasa hispida]

2.4e-134

83.87

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRSVW+ALLV  LLLSLR   VSS LPLQ+ NQG K+S +ESTPKQD +NAHEVHCSRERSRAAWKI+EEYLM +V+KKKYKIS++CRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH
        QEQHK HLDF+DWKCGYCRKRFYEEK+LDQHFDNRHYNLLNVS S+CLADLCGALHCDHV++T SQK+KCNPAAAARNKHMCE LADSCFP+DEG  ASH
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH

Query:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        LHEFFLRQFCDAHTC+GKPKPFSRGR VR + FY+VIS+LT LFVLFFYVFIYLY+RGMRT+PQVLKRLS+SGRKKKPS
Subjt:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8D2 C2H2-type domain-containing protein

2.7e-131

81.85

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQG--SKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF
        MGRRS+ +ALL+ SLLLSLR   VSSTLPLQS NQG  SK+S +ESTPKQD +NAHEVHCSRERSRAAWK++EEYLM +V+KKKYKIST+CRLHPDNDMF
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQG--SKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF

Query:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA
        RDQEQHK HLDF+DWKCGYCRKRFYEEK++DQHFDNRHYNLLNVS ++CLADLCGALHCDHV++  SQK+KCNPAAAARNKHMCE LADSCFP+DEG  A
Subjt:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA

Query:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        SHLHEFFL QFCDAHTC+GKPKPFSRGR VR S FY+VIS+LT LFV+FFYVF YLY RGMRT+PQVLKRLS+SGRKKKPS
Subjt:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

A0A5A7URM7 Zinc finger family protein

2.0e-131

82.21

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQG--SKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF
        MGRRS+ +ALLV SLLLSLR   VSSTLPLQS NQG  SK+S + STPKQD +NAHEVHCSRERSRAAWK++EEYLM +V+KKKY+IST+CRLHPDNDMF
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQG--SKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF

Query:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA
        RDQEQHK HLDF+DWKCGYCRKRFYEEK++DQHFDNRHYNLLNVS ++CLADLCGALHCDHV++  SQK+KCNPAAAARNKHMCE LADSCFP+DEG  A
Subjt:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA

Query:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        SHLHEFFLRQFCDAHTC+GKPKPFSRGR VRTS FY+VIS+LT LFV+FFYVF YLY RGMRT+PQVLKRLS+SGRKKKPS
Subjt:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

A0A6J1EKH9 uncharacterized protein LOC111435184

2.2e-133

84.29

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLV+SLL SLR Q VSSTLPLQS NQGSK+S TES PKQD ++A EVHCSRERSRAAWKI+EEYLM +VDKKK+KISTECRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS
        QEQHK HLDF+DWKCGYCRKRFYEEK+LDQHFDNRHY+LLNVS +KC+ADLCGALHCDHVM++ SQ K+KCNPAA ARNKHMCEALADSCFPI++G  AS
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQ-KTKCNPAAAARNKHMCEALADSCFPIDEGTPAS

Query:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        HLHEFFLRQFCDAHTC+GKPKPFSRGR VRTSW YVVIS+LT L VLFFYVF+YLY+RGMRT+PQVLKRLSESGRKKKPS
Subjt:  HLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

A0A6J1F459 uncharacterized protein LOC111441996

1.4e-132

82.8

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLVLSLLL  R   VSSTLPLQS NQGSK+S TESTPKQD +NAHEVHCSRERSRAAWKI+EEYLM ++DKK+YK+ST+CRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH
        QEQHK HLDF+DWKCGYC+K+FYEEK+LDQHF NRHY+LLNVS SKCLAD CGALHCD V++T SQK+KCNPAAAARNKHMCE LADSCFPID+G  ASH
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH

Query:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        LHEFFLRQFCDAHTC+GKPKPFSRGR VRTS FY+VIS+LT +FVLFFYVFIYLY+RGMRT+PQVLKRLS+SG KKKPS
Subjt:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

A0A6J1J0Y1 uncharacterized protein LOC111482459

1.8e-132

83.15

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD
        MGRRS+W+ALLVLSLLL  R   VSSTLPLQS NQGSK+S TESTPKQD +NAHEVHCSRERSRAAWKI+EEYLM +VDKK+YKIST+CRLHPDNDMFRD
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRD

Query:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH
        QEQHK HLDF+DWKCGYC+K+FYEEK+LDQHF NRHY+LLNVS SKCLAD CGALHCD V+++ SQK+KCNPAAAARNKHMCE LADSCFPID+G  ASH
Subjt:  QEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASH

Query:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        LHEFFLRQFCDAHTC+GKPKPFSRGR VRTS FY+VIS+LT +FVLFFYVFIYLY+RGMRT+PQVLKRLS+SG KKKPS
Subjt:  LHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G40710.1 zinc finger (C2H2 type) family protein

1.8e-84

57.76

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Query:  KQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSK
        K   D  HE+HCSRERSR AWKI++EYLM YV+K++Y++ + CR+H DND++R+QE+HK+  D ++W+CG+C+K FYEEK+LD+HFD+RHYNLLN S  K
Subjt:  KQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSK

Query:  CLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVL
        CL+DLCGALHCD V++TA  K+KCNPAAAA+N+H+CE+LA+SCFP+++G+ A+ LH+FFLRQFCDAHTC+G  KP S+ +  + S  Y++ SI+  + +L
Subjt:  CLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVL

Query:  FFYVFIYLYRRGMRTKPQVLKRLSESGRKKKP
         +Y F+YL+RRG++ + Q LKR+  +G KKKP
Subjt:  FFYVFIYLYRRGMRTKPQVLKRLSESGRKKKP

AT5G63280.1 C2H2-like zinc finger protein

1.2e-83

53.38

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Query:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRD--NAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF
        MGR  +W +L V+ LLL L        L  QS +QG +ES +     ++ +  NA E+HCSRERSRAAW+I+++YL  +V++++Y+I   CRLHPDND++
Subjt:  MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRD--NAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMF

Query:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA
        RDQE HK+H+D  +WKCGYC+K F +EKFLD+HF  RHYNLLN + +KCLADLCGALHCD V+ +   K+KCNP A A+N+H+CE++A+SCFP+ +G  A
Subjt:  RDQEQHKIHLDFSDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPA

Query:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS
        S LHE FLRQFCDAHTCTG  KPF RG   ++  FY+ ISILT + +  FY+ ++L++R  R+  Q L+R+ +SG+K KPS
Subjt:  SHLHEFFLRQFCDAHTCTGKPKPFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAAGGCGATCCGTATGGATTGCTCTTCTCGTCCTCTCTCTTCTTCTTTCCTTGCGAACACAGCCAGTTTCTTCCACTCTTCCGCTTCAATCATCGAATCAGGGTTC
TAAAGAATCTACCACTGAGAGTACTCCAAAGCAGGATCGGGACAATGCTCATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATC
TAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAGGCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTT
AGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTTTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTG
CTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACGGCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGG
CTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAA
CCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCATTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAG
GGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGAAGAAAGAAAAAACCTTCATAG

mRNA sequence

Show/hide mRNA sequence

GAAAATCCTCTGCAAGTGATTTTCATTCATTTTCAGTTGTGGAGGTTCCATAAAATCGACGATGGGAAGGCGATCCGTATGGATTGCTCTTCTCGTCCTCTCTCTTCTTC
TTTCCTTGCGAACACAGCCAGTTTCTTCCACTCTTCCGCTTCAATCATCGAATCAGGGTTCTAAAGAATCTACCACTGAGAGTACTCCAAAGCAGGATCGGGACAATGCT
CATGAGGTACATTGCTCGAGAGAGAGGAGTCGGGCGGCGTGGAAAATAGTTGAGGAGTATCTAATGTCATATGTGGATAAAAAGAAATACAAGATTTCTACTGAGTGTAG
GCTTCACCCAGATAATGATATGTTCAGAGATCAAGAACAGCACAAGATCCATCTAGATTTTAGTGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGT
TTCTCGATCAGCATTTTGACAATAGACACTATAATTTACTCAATGTGAGTGGAAGCAAGTGCTTGGCAGATCTTTGTGGTGCATTGCATTGTGACCATGTGATGGAGACG
GCATCACAGAAAACTAAATGCAATCCTGCTGCTGCTGCAAGAAATAAGCACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCCATCGACGAGGGCACTCCGGCCAGCCA
TCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACCTGTACCGGAAAGCCAAAACCTTTCTCCAGAGGTCGACTGGTTAGGACGAGTTGGTTCTACGTTGTCA
TTTCAATTTTGACAACACTTTTTGTGCTGTTTTTCTACGTCTTCATTTACTTGTATAGAAGGGGAATGCGAACGAAACCGCAGGTGCTGAAGCGCCTCTCAGAAAGTGGA
AGAAAGAAAAAACCTTCATAGGATAGAGAGAGTGACAGCGCACAGCTTGTTCCTTCAACCAATTTGTTTTCTTTCATCATTTGTAACTATAGAAGCCTCCATACAAATTC
AACTTCTTGAGAACAATGAGATTTTGTACCATAACATTTGTTTAAAGATATAAACATTTAATGAAGGTTCACTTTTGC

Protein sequence

Show/hide protein sequence

MGRRSVWIALLVLSLLLSLRTQPVSSTLPLQSSNQGSKESTTESTPKQDRDNAHEVHCSRERSRAAWKIVEEYLMSYVDKKKYKISTECRLHPDNDMFRDQEQHKIHLDF
SDWKCGYCRKRFYEEKFLDQHFDNRHYNLLNVSGSKCLADLCGALHCDHVMETASQKTKCNPAAAARNKHMCEALADSCFPIDEGTPASHLHEFFLRQFCDAHTCTGKPK
PFSRGRLVRTSWFYVVISILTTLFVLFFYVFIYLYRRGMRTKPQVLKRLSESGRKKKPS

Sed0026914 (gene) of Chayote v1 genome