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Sed0026927 (gene) of Chayote v1 genome

Gene IDSed0026927
OrganismSechium edule (Chayote v1)
DescriptionRibosomal protein S14
Genome locationLG03:3664648..3666539
RNA-Seq ExpressionSed0026927
SyntenySed0026927
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0015935 - small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001209 - Ribosomal protein S14
IPR018271 - Ribosomal protein S14, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032953.1 Ribosomal protein S14, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4491.09Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        M+ DKRNILDH RRQLAAKFELKRKLFKAVCNDPSLPNDVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

XP_022134507.1 uncharacterized protein LOC111006733 [Momordica charantia]3.7e-4592.08Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MSGDKRNILDH RRQLAAKFELKRKL+KAVCNDPSLPNDVREE R KL+KLPRNSSFTRLRNRCIFTGRPRAVYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

XP_022938933.1 uncharacterized protein LOC111444996 [Cucurbita moschata]2.4e-4490.1Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        M+ DKRNILDH RRQLAAKFELKRKL+KAVCNDPSLPNDVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

XP_023550870.1 uncharacterized protein LOC111808878 [Cucurbita pepo subsp. pepo]1.8e-4491.09Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        M+ DKRNILDH RRQLAAKFELKRKL+KAVCNDPSLPNDVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFRDLA+KGLVMGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

XP_038884392.1 ribosomal protein S14, mitochondrial [Benincasa hispida]2.4e-4489.11Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MS DKRNILDH RRQLAAKFE+KRKL+KA+CNDPSLPNDVRE+HR KL+KLPRNSSFTRLRNRCIFTGRPRAVYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

TrEMBL top hitse value%identityAlignment
A0A0A0LSR8 Uncharacterized protein1.7e-4388.12Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MSGDKRNILD+ RRQLAAKFELKR LFKA+CNDPSLP D+REEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFRMSRIVFR+LA KGLVMGVKK+S
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

A0A1S4E169 ribosomal protein S14, mitochondrial2.2e-4388.12Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MSGDKRNILD+ RRQLAAKFE+KR LFKA+CNDPSLP DVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFRMSRIVFR+LA KGLVMGVKK+S
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

A0A5D3CKB3 Ribosomal protein S142.2e-4388.12Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MSGDKRNILD+ RRQLAAKFE+KR LFKA+CNDPSLP DVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFRMSRIVFR+LA KGLVMGVKK+S
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

A0A6J1C264 uncharacterized protein LOC1110067331.8e-4592.08Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        MSGDKRNILDH RRQLAAKFELKRKL+KAVCNDPSLPNDVREE R KL+KLPRNSSFTRLRNRCIFTGRPRAVYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

A0A6J1FKA4 uncharacterized protein LOC1114449961.2e-4490.1Show/hide
Query:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS
        M+ DKRNILDH RRQLAAKFELKRKL+KAVCNDPSLPNDVREEHR KL+KLPRNSSFTRLRNRCIFTGRPR VYQLFR+SRIVFRDLA+KGL+MGVKKSS
Subjt:  MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSS

Query:  W
        W
Subjt:  W

SwissProt top hitse value%identityAlignment
P05716 Ribosomal protein S14, mitochondrial8.9e-3469.39Show/hide
Query:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        +KRNI DH RR LAAK+EL+RKL+KA C D  LP+D+R++ R KL+KLPRNSSF R+RNRCI TGRPR+VY+LFR+SRIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

P14875 Ribosomal protein S14, mitochondrial9.5e-3670.41Show/hide
Query:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        +KRNI DH RR LA K+EL+RKL+KA CNDP+LP+D+R++HR KL+KLPRNSSF R+RNRCI TGRPR+VY+ FR+SRIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

P26873 Ribosomal protein S14, mitochondrial7.8e-3065.96Show/hide
Query:  ILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        I DH RR L AK+ELKR  +KA+C D +LPN +R E+  KL+KLPRNSS TR+RNRCIFTGRPR+VY+LFR+SRIVFR+LA+KG ++G+ KS W
Subjt:  ILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

P46752 Ribosomal protein S14, mitochondrial2.8e-1956.18Show/hide
Query:  RRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        RR+L  K+E KR L+KA+ +D +L  D+R     KL KLPRNSS  R++NRCI TGR  +VY+  R+SRI FRDLAN+GL+ G  KSSW
Subjt:  RRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

P49387 Ribosomal protein S14, mitochondrial5.8e-3367.35Show/hide
Query:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        +K+N  DH RR LAAKFEL+RKL+KA C DP LP+D+R++HR KL+KLPRNSSF R+RNRCI TGRPR+V + FR+ RIVFR LA++G +MG+KKSSW
Subjt:  DKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

Arabidopsis top hitse value%identityAlignment
AT2G34520.1 mitochondrial ribosomal protein S147.0e-3465.66Show/hide
Query:  GDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        G KRN  DH RR LAA+FEL+RKL+KA C DP LP+++R+++R KL+KLPRNS+F R+RNRC+FTGR R+V +LFR+SRIVFR LA+KG +MG+ KSSW
Subjt:  GDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW

ATCG00330.1 chloroplast ribosomal protein S143.0e-0838.89Show/hide
Query:  RRQLAAKFEL-KRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW
        R++L  K+ L +R   K +   PSL    + +   KL   PRNS+ TRL  RC  TGRPRA Y+ F +S  + R++    L+ G  +SSW
Subjt:  RRQLAAKFEL-KRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGGGGACAAGCGGAACATTCTTGATCACTGTCGCCGGCAGCTTGCTGCGAAGTTTGAGTTGAAGCGGAAGCTTTTCAAAGCTGTTTGCAATGATCCGAGTCTTCC
CAACGACGTGCGAGAAGAGCACCGTTGTAAGCTGGCGAAGTTGCCGAGAAATAGTTCGTTTACTCGGCTAAGGAATCGCTGCATATTCACCGGCCGACCTAGGGCTGTGT
ACCAGCTTTTCCGTATGTCTCGTATCGTTTTCCGTGATCTGGCGAACAAAGGTCTTGTTATGGGTGTCAAGAAATCTTCTTGGTAG
mRNA sequenceShow/hide mRNA sequence
TTTCACTTGTTGCTCACTTCGCCCATTCAGTCGATTTCGATTTCTTCCATCGCACGGTCCTCTTCGCTCAAAGGCAGCCATTGTAGAAGGTGTAAAAGCTTGAAGGGTTT
TGAAATGTCCGGGGACAAGCGGAACATTCTTGATCACTGTCGCCGGCAGCTTGCTGCGAAGTTTGAGTTGAAGCGGAAGCTTTTCAAAGCTGTTTGCAATGATCCGAGTC
TTCCCAACGACGTGCGAGAAGAGCACCGTTGTAAGCTGGCGAAGTTGCCGAGAAATAGTTCGTTTACTCGGCTAAGGAATCGCTGCATATTCACCGGCCGACCTAGGGCT
GTGTACCAGCTTTTCCGTATGTCTCGTATCGTTTTCCGTGATCTGGCGAACAAAGGTCTTGTTATGGGTGTCAAGAAATCTTCTTGGTAGATATTGGTTGATGGTAGAGG
CTTCTGTAGTTGGGGATCAATTATCATTATTGGGTTGTTTTATTTCTTCAGGATGCTATCTCTAATATCAGCGAGAATTACTTAAAGACACTGAAAAGGTGATGTTAATT
ATAAGTTCCTTGGCCACGACACATGCATTCGTGCCTGTTTACGTGTATGACAAAAAAAGAGTAAGATTTGATTTGTTATTCAATAAGCATTTTCTGGTACATTGCTACTA
ATGCTGTTGTATTATTCTGATAGAAAATGTTTTTGTGTCCCCGCCATTGAGTTGTTTTGCACTATCTTGGAATATCAGCTGCTTCTTCTTTTAGCCCCGGTGGCCTAGTG
ACGTATTTATGAAAATAGTGGAGGACTTGGGAG
Protein sequenceShow/hide protein sequence
MSGDKRNILDHCRRQLAAKFELKRKLFKAVCNDPSLPNDVREEHRCKLAKLPRNSSFTRLRNRCIFTGRPRAVYQLFRMSRIVFRDLANKGLVMGVKKSSW