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Sed0026977 (gene) of Chayote v1 genome

Gene IDSed0026977
OrganismSechium edule (Chayote v1)
DescriptionTranslocator protein-like protein
Genome locationLG07:2474213..2475087
RNA-Seq ExpressionSed0026977
SyntenySed0026977
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR004307 - TspO/MBR-related protein
IPR038330 - TspO/MBR-related superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068008.1 translocator protein-like protein [Cucumis melo var. makuwa]2.0e-6069.63Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA
        MAST+LKHRK DDS P          GT    NK +AKRGL+SLALAISIP+SLT   +FL +N ++YYP S  +PFWVPST+VV+ GSL SSLLMGV+A
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA

Query:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WLVWAEGGFH+RPN LYLY +Y VL LAWYAL  GAGARRL   ACLGKTAALVGC RLFRGV+  AADLVKPCL WSV LTVVNL M SL
Subjt:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

KAG6575839.1 Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5865.45Show/hide
Query:  MASTELKHRKPDDSK--PDGGAATTTTTGTH--NKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSA
        MASTELKHR   DS   P   AA    +     NKA+AKRGLKSLA+A+SIP+++T  S+ LL  P++YYP +TKPFWVPS RVV+ GSLASSLLMG+S+
Subjt:  MASTELKHRKPDDSK--PDGGAATTTTTGTH--NKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSA

Query:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WL WAEGGF ARPN LYLY +Y VLC+AWY L LGAG+R LG  ACLGKTA LVGC RLFRGV+  AADLV+PCL WSVFLT+V+L M+++
Subjt:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

XP_022992488.1 translocator protein homolog [Cucurbita maxima]2.9e-5966.49Show/hide
Query:  MASTELKHRKPDDSKPDGGAA-TTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV
        MASTELKHR   DS     AA   +T    NKA+AKRGLKSLA+A+SIP+++T  S+ LL+ P++YYP +TKPFWVPS RVV+ GSLASSLLMG+S+WL 
Subjt:  MASTELKHRKPDDSKPDGGAA-TTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV

Query:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WAEGGF A+PN LYLY +Y VLC+AWY L LGAG+R LG  ACLGKTA LVGC RLFRGV+  AADLV+PCL WSVFLT+V+L M+S+
Subjt:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

XP_023548365.1 translocator protein homolog [Cucurbita pepo subsp. pepo]3.7e-5965.24Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLVW
        MASTELKHR   DS     A   +     NKA+AKRGLKSLA+A+SIP+++T  S+ LL+ P++YYP +TKPFWVPS RVV+ GSLASSLLMG+S+WL W
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLVW

Query:  AEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        AEGGF A+PN +YLY +Y VLC+AWY L LGAG+R LG  ACLGKTA LVGC RLFRGV+  AADLV+PCL WSVFLT+V+L M+S+
Subjt:  AEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

XP_038897197.1 translocator protein homolog [Benincasa hispida]2.1e-6270.1Show/hide
Query:  MASTELKHRKPDDSK------PDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPS-TKPFWVPSTRVVSVGSLASSLLMG
        MASTELKHRK DDS        D G A        NKA+ KRGLKSLALAI+IP+SLT  S+FLL+NP++YYP S  +PFW+PS +VV+ GSL SSLLMG
Subjt:  MASTELKHRKPDDSK------PDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPS-TKPFWVPSTRVVSVGSLASSLLMG

Query:  VSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        V+AWLVWAEGGFHA+PN LYLY +Y  LC+AWYAL  GAGARRLG  ACLGKTAALVGC RLFRGV+  AADLVKPCL WSVFLTVVNL M+SL
Subjt:  VSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

TrEMBL top hitse value%identityAlignment
A0A0A0KAU9 Uncharacterized protein6.6e-6270.16Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA
        MAST+LKHRK DDS P    +     GT    NK +AKRGL+SLALAISIP+SLT F + L +N ++YYP S  KPFWVPS +VV+ GSL SSLLMGV+A
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA

Query:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WLVWAEGGFHARPN LYLY +YSVLCL WYAL  GAGARRL   ACLGKTAALVGC RLFRGV+  AADLVKPCL WSV LTVVNL ++SL
Subjt:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

A0A5A7VJL5 Translocator protein-like protein9.6e-6169.63Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA
        MAST+LKHRK DDS P          GT    NK +AKRGL+SLALAISIP+SLT   +FL +N ++YYP S  +PFWVPST+VV+ GSL SSLLMGV+A
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGT---HNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPST-KPFWVPSTRVVSVGSLASSLLMGVSA

Query:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WLVWAEGGFH+RPN LYLY +Y VL LAWYAL  GAGARRL   ACLGKTAALVGC RLFRGV+  AADLVKPCL WSV LTVVNL M SL
Subjt:  WLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

A0A6J1DBR2 translocator protein homolog1.3e-5260.75Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLVW
        MAS +LKHRKP +S     +AT T       A A+RGLKSLA+A+S+P+SL+  +++LL++P  + P S KPFW PS   V++GS ASSLLMG + WLVW
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLVW

Query:  AEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLS
        A+GGFH+ PN LYLY +Y +LC  WY L LGAGA RL   ACL KTAALVGC RLFR V+  AADLVKPCLAWSVFLTVVNL M++
Subjt:  AEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLS

A0A6J1GQH6 translocator protein homolog9.0e-5965.96Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGTH-NKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV
        MASTELKHR   DS     AA   +     NKA+AKRGLKSLA+A+SIP+++T  S+ LL  P++YYP +TKPFWVPS RVV+ GSLASSLLMG+S+WL 
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGTH-NKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV

Query:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WAEGGF ARPN LYLY +Y VLC+AW+ L LGAG+R LG  ACLGKTA LVGC RLFRGV+  AADLV+PCL WSVFLT+V+L M+S+
Subjt:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

A0A6J1JZC9 translocator protein homolog1.4e-5966.49Show/hide
Query:  MASTELKHRKPDDSKPDGGAA-TTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV
        MASTELKHR   DS     AA   +T    NKA+AKRGLKSLA+A+SIP+++T  S+ LL+ P++YYP +TKPFWVPS RVV+ GSLASSLLMG+S+WL 
Subjt:  MASTELKHRKPDDSKPDGGAA-TTTTTGTHNKAMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLV

Query:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL
        WAEGGF A+PN LYLY +Y VLC+AWY L LGAG+R LG  ACLGKTA LVGC RLFRGV+  AADLV+PCL WSVFLT+V+L M+S+
Subjt:  WAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL

SwissProt top hitse value%identityAlignment
O82245 Translocator protein homolog9.0e-3241.12Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGTHNK-------------AMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLA
        M S ++++R  DD      AATT    T  K             AMAKRGLKSL +A++ P+ +T F+ + L     Y   +    W+P   ++    LA
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGTHNK-------------AMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLA

Query:  SSLLMGVSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAM
        SS LMG++AWLVW +GGFH +PN LYLY+   +LCL W  +T   G+   GLA  LG++AAL GC++ F  +S  A +LVKPCLAW+ F+  VN+ +
Subjt:  SSLLMGVSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAM

Arabidopsis top hitse value%identityAlignment
AT2G47770.1 TSPO(outer membrane tryptophan-rich sensory protein)-related6.4e-3341.12Show/hide
Query:  MASTELKHRKPDDSKPDGGAATTTTTGTHNK-------------AMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLA
        M S ++++R  DD      AATT    T  K             AMAKRGLKSL +A++ P+ +T F+ + L     Y   +    W+P   ++    LA
Subjt:  MASTELKHRKPDDSKPDGGAATTTTTGTHNK-------------AMAKRGLKSLALAISIPLSLT-FSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLA

Query:  SSLLMGVSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAM
        SS LMG++AWLVW +GGFH +PN LYLY+   +LCL W  +T   G+   GLA  LG++AAL GC++ F  +S  A +LVKPCLAW+ F+  VN+ +
Subjt:  SSLLMGVSAWLVWAEGGFHARPNTLYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACCGAACTAAAACACCGCAAACCAGACGACTCCAAACCTGACGGCGGCGCCGCCACCACCACCACCACCGGAACACACAACAAAGCCATGGCCAAACGAGG
CCTCAAGTCCCTTGCTCTCGCAATCTCCATCCCTCTCTCCCTCACCTTCTCCCTCTTCCTCCTCACCAACCCGCAACACTACTACCCTCCGTCGACGAAACCCTTCTGGG
TTCCCTCGACGAGGGTCGTAAGTGTTGGGTCTTTGGCTTCTAGCTTACTGATGGGCGTCTCGGCGTGGCTCGTGTGGGCCGAGGGCGGCTTCCACGCTAGGCCCAACACC
TTGTACCTGTATGTTGTGTACTCGGTGCTGTGCTTGGCGTGGTATGCGCTCACTCTTGGAGCTGGCGCCAGGAGGTTGGGTTTGGCGGCGTGCTTGGGGAAGACGGCGGC
GTTGGTTGGGTGTCATCGCTTGTTTCGGGGAGTGAGTCGGACGGCGGCGGACTTGGTTAAGCCTTGCTTGGCGTGGTCTGTGTTTCTCACTGTTGTTAACCTTGCCATGC
TTTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
CCATCAACTCCACGTGTCCTTTTCACCTCCTTAAATCCCCTTCCCTTTGCTTCAATCTCCCCCACCGCCAAACATGGCTTCCACCGAACTAAAACACCGCAAACCAGACG
ACTCCAAACCTGACGGCGGCGCCGCCACCACCACCACCACCGGAACACACAACAAAGCCATGGCCAAACGAGGCCTCAAGTCCCTTGCTCTCGCAATCTCCATCCCTCTC
TCCCTCACCTTCTCCCTCTTCCTCCTCACCAACCCGCAACACTACTACCCTCCGTCGACGAAACCCTTCTGGGTTCCCTCGACGAGGGTCGTAAGTGTTGGGTCTTTGGC
TTCTAGCTTACTGATGGGCGTCTCGGCGTGGCTCGTGTGGGCCGAGGGCGGCTTCCACGCTAGGCCCAACACCTTGTACCTGTATGTTGTGTACTCGGTGCTGTGCTTGG
CGTGGTATGCGCTCACTCTTGGAGCTGGCGCCAGGAGGTTGGGTTTGGCGGCGTGCTTGGGGAAGACGGCGGCGTTGGTTGGGTGTCATCGCTTGTTTCGGGGAGTGAGT
CGGACGGCGGCGGACTTGGTTAAGCCTTGCTTGGCGTGGTCTGTGTTTCTCACTGTTGTTAACCTTGCCATGCTTTCTCTTTGAGAGCTTTGAATATGGAGAGAGTTTTG
TTTGCTTTGCTTTTGTTGTACGATGTCGTTTGAATGCATGTGTTTATGTTGCACCCTTTTTTTTTTCCTTGCATTTGTGATAAATAAAATCTGGTTGTGATTTGTTATTG
CTAGGATTTGATGATGTTGCTTGTTTAATCGGATTGATATTTGCCAACAAAAGCCAGATAAAGGCAGAAATGAATAAGTTAAAAAGGCCGACATATTCTCCCAGG
Protein sequenceShow/hide protein sequence
MASTELKHRKPDDSKPDGGAATTTTTGTHNKAMAKRGLKSLALAISIPLSLTFSLFLLTNPQHYYPPSTKPFWVPSTRVVSVGSLASSLLMGVSAWLVWAEGGFHARPNT
LYLYVVYSVLCLAWYALTLGAGARRLGLAACLGKTAALVGCHRLFRGVSRTAADLVKPCLAWSVFLTVVNLAMLSL