; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0026997 (gene) of Chayote v1 genome

Gene IDSed0026997
OrganismSechium edule (Chayote v1)
Descriptionsignal recognition particle 19 kDa protein
Genome locationLG12:4419211..4425575
RNA-Seq ExpressionSed0026997
SyntenySed0026997
Gene Ontology termsGO:0006617 - SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition (biological process)
GO:0005786 - signal recognition particle, endoplasmic reticulum targeting (cellular component)
GO:0004386 - helicase activity (molecular function)
GO:0008312 - 7S RNA binding (molecular function)
InterPro domainsIPR002778 - Signal recognition particle, SRP19 subunit
IPR036521 - Signal recognition particle, subunit SRP19-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN54616.2 hypothetical protein Csa_018066 [Cucumis sativus]9.8e-6292.65Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE---SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE   SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE---SSSTAGSSKSGKGGRKKK

XP_004147903.1 signal recognition particle 19 kDa protein [Cucumis sativus]9.8e-6292.65Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTC EIGDCC HLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE---SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE   SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE---SSSTAGSSKSGKGGRKKK

XP_008438988.1 PREDICTED: signal recognition particle 19 kDa protein [Cucumis melo]5.7e-6293.33Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

XP_022138272.1 signal recognition particle 19 kDa protein [Momordica charantia]3.6e-6494.07Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SKSGKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

XP_038879562.1 signal recognition particle 19 kDa protein [Benincasa hispida]8.9e-6394.81Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

TrEMBL top hitse value%identityAlignment
A0A0A0L5F9 Uncharacterized protein8.1e-6293.33Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDG LSNPAITSRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

A0A1S3AYC2 signal recognition particle 19 kDa protein2.8e-6293.33Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRV LKKEDGTLSNPAITSRKQLMLR+
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

A0A6J1CAM2 signal recognition particle 19 kDa protein1.7e-6494.07Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGE+PNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQ+MLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGRTKKQE  SSSTAG SKSGKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

A0A6J1GUF8 signal recognition particle 19 kDa protein1.4e-6192.59Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYP+Y+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGR KKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

A0A6J1IY39 signal recognition particle 19 kDa protein1.1e-6193.33Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MDGEIPNIKRW+VLYPIY+NSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAI SRKQLMLRI
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK
        AELVP+HPGR KKQE  SSSTAG SK GKGGRKKK
Subjt:  AELVPKHPGRTKKQE--SSSTAGSSKSGKGGRKKK

SwissProt top hitse value%identityAlignment
P09132 Signal recognition particle 19 kDa protein7.1e-2350.38Show/hide
Query:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R+I +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  KHPGRTKK----QESSSTAGSSKSGKGGRKK
        K   RT+K     +S      SK GKG +KK
Subjt:  KHPGRTKK----QESSSTAGSSKSGKGGRKK

P49964 Signal recognition particle 19 kDa protein2.7e-4672.09Show/hide
Query:  NIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPK
        +IK+W V+YP+Y+NSKKT+AEGRRI   KAC +PTC EI DCCSHLK+P AIE+DKAYPRDF Q GRVRV LKK+DG+  NPAI ++KQLM++IAELVPK
Subjt:  NIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPK

Query:  HPGRTKKQE--SSSTAGSSKSGKGGRKKK
        H GRTKKQE  +SSTAG+SK GKGG+KKK
Subjt:  HPGRTKKQE--SSSTAGSSKSGKGGRKKK

Q3ZBG7 Signal recognition particle 19 kDa protein1.2e-2249.62Show/hide
Query:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R+I +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D C+ + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  KHPGRTKK----QESSSTAGSSKSGKGGRKK
        K   RT+K     +S      SK GKG +KK
Subjt:  KHPGRTKK----QESSSTAGSSKSGKGGRKK

Q5RBR1 Signal recognition particle 19 kDa protein7.1e-2350.38Show/hide
Query:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP
        R+I +YP Y+N+KKTIAEGRRI +SKA ENPT  EI D CS + L   +E +K Y     RD   RGRVRV LK+EDG+L      SRK +ML  AE++P
Subjt:  RWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYP----RDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVP

Query:  KHPGRTKK----QESSSTAGSSKSGKGGRKK
        K   RT+K     +S      SK GKG +KK
Subjt:  KHPGRTKK----QESSSTAGSSKSGKGGRKK

Q943Z6 Signal recognition particle 19 kDa protein1.5e-4968.97Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+W+V+YP+Y+NSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE-----------SSSTAG-SSKSGKGGRKKK
        AELVP+HP R KKQE           ++ST+G SSKSGKGG+KK+
Subjt:  AELVPKHPGRTKKQE-----------SSSTAG-SSKSGKGGRKKK

Arabidopsis top hitse value%identityAlignment
AT1G48160.1 signal recognition particle 19 kDa protein, putative / SRP19, putative1.1e-5068.97Show/hide
Query:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI
        MD    NIK+W+V+YP+Y+NSKKT+AEGRRI VSK+CENP C EI DCC HLKLP A+EIDKAYPRDFMQ GRVRV LK+EDGTL NPAITSRK LM +I
Subjt:  MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRI

Query:  AELVPKHPGRTKKQE-----------SSSTAG-SSKSGKGGRKKK
        AELVP+HP R KKQE           ++ST+G SSKSGKGG+KK+
Subjt:  AELVPKHPGRTKKQE-----------SSSTAG-SSKSGKGGRKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAGAAATTCCCAACATAAAGAGATGGATAGTATTGTATCCCATCTATATGAATTCAAAGAAGACAATAGCCGAAGGAAGACGTATAGGAGTTAGCAAAGCATG
CGAGAATCCTACGTGTGCGGAGATTGGGGATTGCTGCAGTCATCTCAAACTTCCTTTTGCAATTGAGATTGATAAGGCTTATCCTCGCGATTTCATGCAAAGAGGGAGAG
TGCGCGTTCTGCTGAAAAAGGAGGATGGAACTCTGTCTAATCCAGCTATTACTTCCCGAAAGCAACTGATGCTTCGTATAGCCGAACTTGTTCCGAAACATCCTGGGAGG
ACAAAGAAGCAGGAGTCATCATCAACTGCGGGATCTTCAAAATCTGGCAAGGGTGGAAGAAAGAAGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATTTATTGTTGTTTTAGTAAAAGGTAAACAATAAACCCTAACTTTCTCTGCACAGCACCCCTTTCTCACACATCTCTTTCTCTGGTGCTCGTTTTTTTTTTGATAAAATC
TCTGTATCCAAAGAACGAATGCTCTGCTATTCATCTTCGACGACTCTTGGAAAGTAAAAAAGGTGGAAAATGGATGGAGAAATTCCCAACATAAAGAGATGGATAGTATT
GTATCCCATCTATATGAATTCAAAGAAGACAATAGCCGAAGGAAGACGTATAGGAGTTAGCAAAGCATGCGAGAATCCTACGTGTGCGGAGATTGGGGATTGCTGCAGTC
ATCTCAAACTTCCTTTTGCAATTGAGATTGATAAGGCTTATCCTCGCGATTTCATGCAAAGAGGGAGAGTGCGCGTTCTGCTGAAAAAGGAGGATGGAACTCTGTCTAAT
CCAGCTATTACTTCCCGAAAGCAACTGATGCTTCGTATAGCCGAACTTGTTCCGAAACATCCTGGGAGGACAAAGAAGCAGGAGTCATCATCAACTGCGGGATCTTCAAA
ATCTGGCAAGGGTGGAAGAAAGAAGAAATAGATCCTATTTTCTAATTGCAATGTACCAGATTGTTATTGTCCAGGCAAGCAGTTTCATTTTTAGGTCTTATTTCTTAATT
CTGAACTACCTTTGAGTATTGGTGTTCTGCCTCAGCCCCCATCCAAAATGTGAACTTCAACACACTGGGTTTGTTTTGAACAAATTTGTTAAATAGTGGATCATGGAGTT
TTACTGAGATAAAGTTACTGATAGGAAAAAGGGAGAATGGTGCATGAAAACTTAAGTTGAATGATTCACTCTTTTGCTTTAATCATTTGAGATTGAAAGTGAAATAAAAG
AACCATTCTAGGTTGTCCTAGGGGAGCGATAAAAAATGTCATGAGTTTAATCTATGTCGACATGACAGTGACCACCTGTTTATGAATTCATTTTTACAGGGTTTTTTTTA
GAACAAAATGTTATAAGATTAGATGCTTTGCCCTGTAAAAATAGTCGAGGTTGAAGTGCATGTAAGCTGACTGGATACTCACGAATATAAAAGTGTGGAAATTTCTCAAT
CATTTGCCCAGGTC
Protein sequenceShow/hide protein sequence
MDGEIPNIKRWIVLYPIYMNSKKTIAEGRRIGVSKACENPTCAEIGDCCSHLKLPFAIEIDKAYPRDFMQRGRVRVLLKKEDGTLSNPAITSRKQLMLRIAELVPKHPGR
TKKQESSSTAGSSKSGKGGRKKK