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Sed0026998 (gene) of Chayote v1 genome

Gene IDSed0026998
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG04:34025668..34026335
RNA-Seq ExpressionSed0026998
SyntenySed0026998
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593874.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]5.0e-4176.27Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL
        MAVV   HHHNH R  R  PTLFL A  +LLL SAIAAR TPI+   ET+   G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GLSLPL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_008449315.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]2.4e-3572.17Show/hide
Query:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY
        V  LHH     L     TLFLL    LLL S+IAAR TPI +  E + PAGT ERV TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQ GLSLPLEYY
Subjt:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY

Query:  PEAWRCKCGNSLYMP
        PEAWRCKCGN+LYMP
Subjt:  PEAWRCKCGNSLYMP

XP_022930459.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]9.4e-4074.59Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAA----ILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGL
        MAVV   HHHNH R  R  PTLFL A      +LLLASAIAAR TPI+   ET+   G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAA----ILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGL

Query:  SLPLEYYPEAWRCKCGNSLYMP
        SLPLEYYPEAWRCKCGNSLYMP
Subjt:  SLPLEYYPEAWRCKCGNSLYMP

XP_023000566.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]2.2e-4177.97Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL
        MAVV   HHHNH R  R  PTLFL  A +LLLASAIAAR TPI+   ET+ P G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GLSLPL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

XP_023513820.1 EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]1.5e-4277.97Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL
        MAVV   HHHNH R  R  PTLFL A  +LLLASAIAAR TPI+   ET+ P G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GLSLPL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

TrEMBL top hitse value%identityAlignment
A0A0A0LKT0 Epidermal patterning factor-like protein1.2e-3266.39Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPI-RKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLP
        MA++  LHH       R  P   LL   +LLL S+IAAR TPI ++ E    P GT+E   TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQ GLSLP
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPI-RKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLP

Query:  LEYYPEAWRCKCGNSLYMP
        LEYYPEAWRCKCGN+LYMP
Subjt:  LEYYPEAWRCKCGNSLYMP

A0A1S3BMN7 Epidermal patterning factor-like protein1.2e-3572.17Show/hide
Query:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY
        V  LHH     L     TLFLL    LLL S+IAAR TPI +  E + PAGT ERV TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQ GLSLPLEYY
Subjt:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY

Query:  PEAWRCKCGNSLYMP
        PEAWRCKCGN+LYMP
Subjt:  PEAWRCKCGNSLYMP

A0A5A7UQS2 Epidermal patterning factor-like protein1.2e-3572.17Show/hide
Query:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY
        V  LHH     L     TLFLL    LLL S+IAAR TPI +  E + PAGT ERV TRRRL GPGSSPPTCRSKCGSC PCTAVHVPIQ GLSLPLEYY
Subjt:  VFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYY

Query:  PEAWRCKCGNSLYMP
        PEAWRCKCGN+LYMP
Subjt:  PEAWRCKCGNSLYMP

A0A6J1ERG1 Epidermal patterning factor-like protein4.5e-4074.59Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAA----ILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGL
        MAVV   HHHNH R  R  PTLFL A      +LLLASAIAAR TPI+   ET+   G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAA----ILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGL

Query:  SLPLEYYPEAWRCKCGNSLYMP
        SLPLEYYPEAWRCKCGNSLYMP
Subjt:  SLPLEYYPEAWRCKCGNSLYMP

A0A6J1KG67 Epidermal patterning factor-like protein1.1e-4177.97Show/hide
Query:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL
        MAVV   HHHNH R  R  PTLFL  A +LLLASAIAAR TPI+   ET+ P G EERV TRRRL GPGSSPPTCRSKCGSC+PCTAVHVPI  GLSLPL
Subjt:  MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPL

Query:  EYYPEAWRCKCGNSLYMP
        EYYPEAWRCKCGNSLYMP
Subjt:  EYYPEAWRCKCGNSLYMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 64.7e-1868.42Show/hide
Query:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG C+PC  VHVP+  G  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 48.8e-2558.25Show/hide
Query:  FLLAA----AILLLASA---IAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSL
        FLLAA    A+L L SA   ++A    I +   ++ P G    + + +R GGPGSSPPTCRSKCG C PC  VHVPIQ GLS+PLEYYPEAWRCKCGN L
Subjt:  FLLAA----AILLLASA---IAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSL

Query:  YMP
        +MP
Subjt:  YMP

Q7M1E7 Polygalacturonase5.4e-0640.82Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + +    + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP

Q9FY19 Polygalacturonase7.0e-0640.82Show/hide
Query:  SSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP
        SSPP C++KC  C PC    + +    + P +YYP+ W C C N +Y P
Subjt:  SSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 52.2e-2350.98Show/hide
Query:  PTLFLLAAAILLLASAIAARSTP---IRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLY
        PTL + A  +   +S+ A+   P   + + ++    +G   ++  ++RLGGPGS PP CR KCG C PC AVHVPIQ GL +PLEYYPEAWRCKCGN L+
Subjt:  PTLFLLAAAILLLASAIAARSTP---IRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLY

Query:  MP
        MP
Subjt:  MP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related3.3e-1968.42Show/hide
Query:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG C+PC  VHVP+  G  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP

AT2G30370.2 allergen-related3.3e-1968.42Show/hide
Query:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP
        RR L G GSSPP C SKCG C+PC  VHVP+  G  +  EYYPEAWRCKCGN LYMP
Subjt:  RRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLYMP

AT3G22820.1 allergen-related1.5e-2450.98Show/hide
Query:  PTLFLLAAAILLLASAIAARSTP---IRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLY
        PTL + A  +   +S+ A+   P   + + ++    +G   ++  ++RLGGPGS PP CR KCG C PC AVHVPIQ GL +PLEYYPEAWRCKCGN L+
Subjt:  PTLFLLAAAILLLASAIAARSTP---IRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSLY

Query:  MP
        MP
Subjt:  MP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)6.3e-2658.25Show/hide
Query:  FLLAA----AILLLASA---IAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSL
        FLLAA    A+L L SA   ++A    I +   ++ P G    + + +R GGPGSSPPTCRSKCG C PC  VHVPIQ GLS+PLEYYPEAWRCKCGN L
Subjt:  FLLAA----AILLLASA---IAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCKCGNSL

Query:  YMP
        +MP
Subjt:  YMP

AT4G37810.1 unknown protein9.4e-0634.02Show/hide
Query:  EETEFPAGTEERVATRRRLGGPGSSPPTC-RSKCGSCSPCTAVHVPI--QLGLSLPL----------------------EYYPEAWRCKCGNSLYMP
        +  EF    ++ V    R G  GS PP C R +C SC  C A+ VP   Q  L  PL                       Y P +W+CKCGNS+Y P
Subjt:  EETEFPAGTEERVATRRRLGGPGSSPPTC-RSKCGSCSPCTAVHVPI--QLGLSLPL----------------------EYYPEAWRCKCGNSLYMP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGTAGTCTTCCGCCTCCACCACCACAATCACCGCCGTCTCTGCCGCCCATGCCCCACCCTTTTTCTTCTCGCCGCCGCTATCCTCCTCCTCGCCTCCGCCATTGC
CGCCCGCTCCACTCCCATTAGAAAAACAGAGGAAACAGAGTTTCCGGCCGGAACAGAGGAGCGAGTTGCGACGCGGAGGAGACTCGGCGGGCCGGGGTCGTCGCCGCCGA
CTTGTAGATCGAAGTGCGGCAGTTGCTCGCCGTGCACGGCGGTGCACGTGCCAATTCAGCTGGGGCTGAGTTTGCCGTTGGAATATTACCCTGAAGCTTGGCGGTGCAAA
TGCGGCAACTCGCTTTATATGCCATGA
mRNA sequenceShow/hide mRNA sequence
TTTGACTCAAAAACCAGAAAGAAATAAAAGGAATTTATATATGGATTGAGATATGACATCTCTCTGTTTTTTCTCGTTTTTTGTTTCGATTTTATGACCTTACTCCACTT
CACTTCCTCCCCCATTTCTGGCCGGCGATGGCCGTAGTCTTCCGCCTCCACCACCACAATCACCGCCGTCTCTGCCGCCCATGCCCCACCCTTTTTCTTCTCGCCGCCGC
TATCCTCCTCCTCGCCTCCGCCATTGCCGCCCGCTCCACTCCCATTAGAAAAACAGAGGAAACAGAGTTTCCGGCCGGAACAGAGGAGCGAGTTGCGACGCGGAGGAGAC
TCGGCGGGCCGGGGTCGTCGCCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCTCGCCGTGCACGGCGGTGCACGTGCCAATTCAGCTGGGGCTGAGTTTGCCGTTGGAA
TATTACCCTGAAGCTTGGCGGTGCAAATGCGGCAACTCGCTTTATATGCCATGAAATTTAGCGAAGCTCTGTGACAAAACATTTTTTTTTTTTTTCTTTATTTCTTCTTC
ATCTTTGTCAAATATAATCCATTTCATTTTT
Protein sequenceShow/hide protein sequence
MAVVFRLHHHNHRRLCRPCPTLFLLAAAILLLASAIAARSTPIRKTEETEFPAGTEERVATRRRLGGPGSSPPTCRSKCGSCSPCTAVHVPIQLGLSLPLEYYPEAWRCK
CGNSLYMP