; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027001 (gene) of Chayote v1 genome

Gene IDSed0027001
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG01:5450309..5450816
RNA-Seq ExpressionSed0027001
SyntenySed0027001
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3444994.1 hypothetical protein FNV43_RR14687 [Rhamnella rubrinervis]9.7e-1262.5Show/hide
Query:  KTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH
        KTWSLK+V KELWPW+F +F+    +F+    +VD+V FKI+ VVEA+VLVSTLCFF+LCCG H
Subjt:  KTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH

KAG6570577.1 Conserved oligomeric Golgi complex subunit 5, partial [Cucurbita argyrosperma subsp. sororia]7.9e-1479.63Show/hide
Query:  KKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVS
        KKKTWSLKKV+KELWPWRF LF +NP+D +M++FVVDNVFFKIV VVEAIVL S
Subjt:  KKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVS

KAG7010430.1 hypothetical protein SDJN02_27223, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2082.81Show/hide
Query:  KKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCG
        KKKTWSLKKV+KELWPWRF LF +NP+D  M++FVVDNVFFKIV VVEAIVLVSTLCFF+LCCG
Subjt:  KKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCG

TQD80960.1 hypothetical protein C1H46_033475 [Malus baccata]1.8e-1051.22Show/hide
Query:  MKETERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL
        M+  ++ +    +K+K  WSL+KV  KELWP +FP+FK   ++F++   V+D+V FKI+ VVEA+VLVSTLCFF+LCCG H+
Subjt:  MKETERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL

XP_015880074.1 uncharacterized protein LOC107416129 [Ziziphus jujuba]6.7e-1366.67Show/hide
Query:  MEKKKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH
        M  KKK+WSLKKV KELWPWRF    K   D   LN ++D V FKI+ VVEA+VLVSTLCFFFLCCG H
Subjt:  MEKKKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH

TrEMBL top hitse value%identityAlignment
A0A540L3A7 Uncharacterized protein8.8e-1151.22Show/hide
Query:  MKETERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL
        M+  ++ +    +K+K  WSL+KV  KELWP +FP+FK   ++F++   V+D+V FKI+ VVEA+VLVSTLCFF+LCCG H+
Subjt:  MKETERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL

A0A6J5WZI5 Uncharacterized protein2.6e-1053.85Show/hide
Query:  ERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL
        E K+E   +K+K  WSLKKV  KELWP +F +FK   +DF+    +VD+V FK++  VE +VLVSTLCFF+LCCG H+
Subjt:  ERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL

A0A6P3ZJJ1 uncharacterized protein LOC1074161293.2e-1366.67Show/hide
Query:  MEKKKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH
        M  KKK+WSLKKV KELWPWRF    K   D   LN ++D V FKI+ VVEA+VLVSTLCFFFLCCG H
Subjt:  MEKKKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH

A0A7J7HS32 Uncharacterized protein1.2e-1061.54Show/hide
Query:  KTWSLKKVKKELWPWRFPLFKKNPIDFEMLNF-VVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH
        K WSLKKVKKELWPW    FK     F++    +VD++ F+I+ V EAIVLVSTLCFFFLCCG H
Subjt:  KTWSLKKVKKELWPWRFPLFKKNPIDFEMLNF-VVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGH

M5WY93 Uncharacterized protein2.6e-1053.85Show/hide
Query:  ERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL
        E K+E   +K+K  WSLKKV  KELWP +F +FK   +DF+    +VD+V FK++  VE +VLVSTLCFF+LCCG H+
Subjt:  ERKTECFMEKKKKTWSLKKV-KKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G06475.1 unknown protein2.5e-0538.27Show/hide
Query:  KETERKTECFMEKKKKTWS-LKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL
        K+ +++ E    K+ +TW  L+ +            K   ++  ML  +VD V +K++ VVEA VLVSTLCFF+LCCG H+
Subjt:  KETERKTECFMEKKKKTWS-LKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAAACAGAGAGAAAAACAGAGTGTTTTATGGAGAAGAAGAAGAAGACATGGTCGTTGAAGAAGGTGAAGAAGGAGCTTTGGCCATGGCGGTTTCCACTCTTCAA
AAAGAATCCAATTGATTTTGAGATGCTCAATTTTGTGGTTGATAATGTCTTCTTCAAGATTGTTGTTGTTGTTGAGGCCATTGTTTTGGTCTCCACACTCTGTTTTTTCT
TCCTCTGCTGTGGGGGTCATCTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAACCCTTTTATTTATAACATTCCATAATTTTATCCCAATTATGAAAGAAACAGAGAGAAAAACAGAGTGTTTTATGGAGAAGAAGAAGAAGACATGGTCGTTGAAG
AAGGTGAAGAAGGAGCTTTGGCCATGGCGGTTTCCACTCTTCAAAAAGAATCCAATTGATTTTGAGATGCTCAATTTTGTGGTTGATAATGTCTTCTTCAAGATTGTTGT
TGTTGTTGAGGCCATTGTTTTGGTCTCCACACTCTGTTTTTTCTTCCTCTGCTGTGGGGGTCATCTTTAATTTATTTTATTTTATTTTTCTTAGCTCTTAATTTGGATCA
TTTCTTCATTCTTTTGGTTCATTCATGTTTTTATTTTTCATTTGGGAATTTGGTTTGGTTTTGGGTTTGTTTGTGGTTGTGTTGTAGTTGTACATGATCTTTGTTTGTTT
TTTTTGTTTGTTCGATGTAGGTTTATCATATATGTATTTATAAGGTACCTTCCAATATTAATATACAC
Protein sequenceShow/hide protein sequence
MKETERKTECFMEKKKKTWSLKKVKKELWPWRFPLFKKNPIDFEMLNFVVDNVFFKIVVVVEAIVLVSTLCFFFLCCGGHL