; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027016 (gene) of Chayote v1 genome

Gene IDSed0027016
OrganismSechium edule (Chayote v1)
Descriptionbinding partner of ACD11 1-like
Genome locationLG05:44973142..44976791
RNA-Seq ExpressionSed0027016
SyntenySed0027016
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148092.1 binding partner of ACD11 1 [Cucumis sativus]6.9e-9382.33Show/hide
Query:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--------PTAV-------SNTE
        RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSGATIVDQPV+I +APDYN        P AV        NT 
Subjt:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--------PTAV-------SNTE

Query:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA
        +T + TAGS MQKAEDVVSSMLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA    AGSA
Subjt:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS
        IM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+S
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS

XP_023007523.1 binding partner of ACD11 1-like [Cucurbita maxima]5.0e-9179.92Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS
        +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPV+I  APDYN          P +  + EN GS
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS

Query:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN
         TAGS MQKAEDVVSSMLAKGFTLG + LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA    AG+A+MAN
Subjt:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]6.5e-9179.92Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS
        +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPV+I +APDY+          P +  + EN GS
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS

Query:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN
         TAGS MQKAEDVVSSMLAKGFTLG +ALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA    AG+A+MAN
Subjt:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]1.8e-9381.05Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAV--------------SNTE
        MRTV VTN+SLS  EKDL +FFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLSGATIVDQPV+I +APDYN  AV              ++  
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAV--------------SNTE

Query:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA
        N+G+ TAGS MQKAEDVVSSMLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA    AGSA
Subjt:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        IM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQGKHVG+S
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

XP_038900618.1 binding partner of ACD11 1-like isoform X2 [Benincasa hispida]1.8e-9381.05Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAV--------------SNTE
        MRTV VTN+SLS  EKDL +FFSFSGEIEFVEMRKD ERSQ+AFVTFKD KGAETSILLSGATIVDQPV+I +APDYN  AV              ++  
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAV--------------SNTE

Query:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA
        N+G+ TAGS MQKAEDVVSSMLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA    AGSA
Subjt:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        IM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVL EDQGKHVG+S
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein3.3e-9382.33Show/hide
Query:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--------PTAV-------SNTE
        RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKDSKGAETSILLSGATIVDQPV+I +APDYN        P AV        NT 
Subjt:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--------PTAV-------SNTE

Query:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA
        +T + TAGS MQKAEDVVSSMLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA    AGSA
Subjt:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS
        IM NRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+S
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS

A0A5A7TN24 Binding partner of ACD11 1-like isoform X19.1e-9180.32Show/hide
Query:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN---------------PTAVSNTE
        RTV VTN+SLSA EKDL +FFSFSGEIEFVEMR DNERSQ+AFVTFKD KGAETSILLSGATIVDQPV+I +APDYN                 A+ NT 
Subjt:  RTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN---------------PTAVSNTE

Query:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA
        +T + TAGS +QK EDVVSSMLAKGFTLG +ALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA    AGSA
Subjt:  NTGSETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS
        +MANRYV TGASWVSQTFQRVAKAAVDVSQKTKEKVLA EDQGKHVG+S
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLA-EDQGKHVGSS

A0A6J1G681 binding partner of ACD11 1-like5.9e-9079.1Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS
        +RTV VTN+SLSA+EKDL +FFSFSGEIE VEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPV+I +APDY+          P +  + EN GS
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS

Query:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN
         TAGS M KAEDVVSSMLAKGFTLG +ALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA    AG+A+MAN
Subjt:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

A0A6J1JGG3 binding partner of ACD11 1-like isoform X23.8e-8979.2Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNT----------ENTGS
        MRTV VTN+SL A EK+L EFFSFSGEIEFVEMRKDNE+ Q+AFVTFKD KGAETSILLSGATIVDQP++IV+APDYN  AV+ +          ENTG+
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNT----------ENTGS

Query:  ETA---------GSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA---
        ETA         GS MQKAEDVVSSMLAKGF LG +ALN+AKSFDERHQLT TASSKVASLDQKIGLSEKISVGTTVVNEKV+EMDEKFQVSEKTKA   
Subjt:  ETA---------GSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA---

Query:  -AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAED-QGKH
         AGSAIM NRYVSTGASWVSQTFQRVAKAAVDVSQKTKEK+LAED QGKH
Subjt:  -AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAED-QGKH

A0A6J1L7W4 binding partner of ACD11 1-like2.4e-9179.92Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS
        +RTV VTN+SLSA+EKDL +FFSFSGEIEFVEMRKDNERSQIAFVTFKD KGAETSILLSGATIVDQPV+I  APDYN          P +  + EN GS
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN----------PTAVSNTENTGS

Query:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN
         TAGS MQKAEDVVSSMLAKGFTLG + LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA    AG+A+MAN
Subjt:  ETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA----AGSAIMAN

Query:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS
        RYVSTGASWV+QTFQRVAKAAV+VS KTKEKVLAEDQ K  G S
Subjt:  RYVSTGASWVSQTFQRVAKAAVDVSQKTKEKVLAEDQGKHVGSS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.3e-0625.48Show/hide
Query:  VCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAED-
        V VTN+S    EK + +FFSF G++  +   K  E +Q A + F+     +T++LL  A +    + I  + D    + ++    G + A     K    
Subjt:  VCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKAED-

Query:  VVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEKTKAAGSAIMANRYVSTGASWVSQTFQ
        ++S +L++G+ L +  L K+   D+ + ++S     + S      LS   SV     V EK  E+D KF +S+K     S +    + +   +  +   Q
Subjt:  VVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTV-VNEKVKEMDEKFQVSEKTKAAGSAIMANRYVSTGASWVSQTFQ

Query:  RVAKAAVD
        +V  A  D
Subjt:  RVAKAAVD

Q9LFD5 Binding partner of ACD11 11.2e-5857.76Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA
        +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+P A  + E T S  A S +QKA
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA

Query:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV
        EDVVSSMLAKGF LG +A+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK           +AGSA+M NRYV
Subjt:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV

Query:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
         TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.5e-6457.38Show/hide
Query:  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDY--NPTAVSNTE----NTGSETA
        TM TV V+N+SL A ++DL EFFSFSG+I ++E + + ER+++A+VTFKD +GAET++LLSGATIVD  V +  APDY  +P A+++ E    N   +  
Subjt:  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDY--NPTAVSNTE----NTGSETA

Query:  GSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-----------AGSA
         S ++KAEDVVSSMLAKGF LG +A+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKV+E+D+K+QVSEKTK+           AGSA
Subjt:  GSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-----------AGSA

Query:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQGK
        IM NRYV TGA+WV+  F +VAKAA +V QK KEKV +AE++ K
Subjt:  IMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQGK

AT5G16840.1 binding partner of acd11 18.2e-6057.76Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA
        +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+P A  + E T S  A S +QKA
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA

Query:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV
        EDVVSSMLAKGF LG +A+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK           +AGSA+M NRYV
Subjt:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV

Query:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
         TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.2 binding partner of acd11 13.3e-6157.76Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA
        +R+V V NLS  A E D+ EFFSFSGE+E ++++  NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+P A  + E T S  A S +QKA
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA

Query:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV
        EDVVSSMLAKGF LG +A+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK           +AGSA+M NRYV
Subjt:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV

Query:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
         TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G16840.3 binding partner of acd11 18.2e-6057.76Show/hide
Query:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA
        +R+V V NLS  A E D+ EFFSFSGE+E +++ + NE S  A+VTFK+++GAET++LLSGA+I DQ V I  AP+Y+P A  + E T S  A S +QKA
Subjt:  MRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSETAGSTMQKA

Query:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV
        EDVVSSMLAKGF LG +A+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK           +AGSA+M NRYV
Subjt:  EDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTK-----------AAGSAIMANRYV

Query:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE
         TG SW +  F RVA+AA +V QKTKEKV AE
Subjt:  STGASWVSQTFQRVAKAAVDVSQKTKEKVLAE

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.0e-6154.88Show/hide
Query:  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--PTAV--------SNTENTG
        +M TV V+N+SL A E+DL EFFSFSG+I ++E + +N+ S++A+VTFKD +GAET++LL+G+TIVD  VT+  +PDY   P A+        SN  ++ 
Subjt:  TMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYN--PTAV--------SNTENTG

Query:  SETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-----------
        +    S  +KAEDVVS M++KGF LG +A+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+KFQV+EKTK+           
Subjt:  SETAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKA-----------

Query:  AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQ
        AGSAIM NRYV TGA+WV+  F RV+KAA +V QK KEKV LAE++
Subjt:  AGSAIMANRYVSTGASWVSQTFQRVAKAAVDVSQKTKEKV-LAEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATTGTAGCTGCACAGTGGAAGGAATAGAGTTAGAACCATACCTTCAAACCATGAGAACCGTGTGCGTTACCAATCTCTCGCTGAGCGCGGCGGAGAAAGATTT
GATAGAGTTCTTTTCTTTTTCTGGTGAAATCGAATTCGTCGAGATGCGAAAGGATAATGAGCGATCTCAAATTGCATTCGTTACCTTTAAGGATTCGAAAGGGGCAGAGA
CCTCGATTCTACTCTCGGGAGCTACAATTGTGGATCAACCTGTTACCATTGTTGCCGCTCCGGATTACAATCCTACTGCTGTTTCTAATACAGAGAACACGGGGTCCGAA
ACCGCTGGATCTACAATGCAGAAGGCAGAGGATGTTGTAAGCAGCATGTTGGCCAAAGGCTTCACTCTGGGCAATAATGCTCTCAATAAAGCAAAGTCTTTTGATGAGAG
GCACCAGTTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTGGACCAGAAGATCGGCCTTAGCGAGAAGATTAGTGTCGGCACGACCGTGGTGAATGAGAAAGTGAAAG
AAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCTGCAGGATCAGCTATAATGGCTAACCGCTACGTCTCGACCGGGGCTTCCTGGGTTAGCCAGACGTTTCAA
AGAGTCGCCAAAGCAGCGGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTAGGAAGTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATTGTAGCTGCACAGTGGAAGGAATAGAGTTAGAACCATACCTTCAAACCATGAGAACCGTGTGCGTTACCAATCTCTCGCTGAGCGCGGCGGAGAAAGATTT
GATAGAGTTCTTTTCTTTTTCTGGTGAAATCGAATTCGTCGAGATGCGAAAGGATAATGAGCGATCTCAAATTGCATTCGTTACCTTTAAGGATTCGAAAGGGGCAGAGA
CCTCGATTCTACTCTCGGGAGCTACAATTGTGGATCAACCTGTTACCATTGTTGCCGCTCCGGATTACAATCCTACTGCTGTTTCTAATACAGAGAACACGGGGTCCGAA
ACCGCTGGATCTACAATGCAGAAGGCAGAGGATGTTGTAAGCAGCATGTTGGCCAAAGGCTTCACTCTGGGCAATAATGCTCTCAATAAAGCAAAGTCTTTTGATGAGAG
GCACCAGTTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTGGACCAGAAGATCGGCCTTAGCGAGAAGATTAGTGTCGGCACGACCGTGGTGAATGAGAAAGTGAAAG
AAATGGATGAGAAGTTTCAAGTGTCTGAGAAGACCAAGGCTGCAGGATCAGCTATAATGGCTAACCGCTACGTCTCGACCGGGGCTTCCTGGGTTAGCCAGACGTTTCAA
AGAGTCGCCAAAGCAGCGGTAGATGTTAGCCAGAAAACGAAGGAGAAGGTTTTAGCTGAGGATCAAGGGAAACATGTAGGAAGTTCTTAA
Protein sequenceShow/hide protein sequence
MINCSCTVEGIELEPYLQTMRTVCVTNLSLSAAEKDLIEFFSFSGEIEFVEMRKDNERSQIAFVTFKDSKGAETSILLSGATIVDQPVTIVAAPDYNPTAVSNTENTGSE
TAGSTMQKAEDVVSSMLAKGFTLGNNALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISVGTTVVNEKVKEMDEKFQVSEKTKAAGSAIMANRYVSTGASWVSQTFQ
RVAKAAVDVSQKTKEKVLAEDQGKHVGSS