CuGenDBv2

Gene ID	Sed0027048
Organism	Sechium edule (Chayote v1)
Description	WD repeat-containing protein 43
Genome location	LG09:38770781..38777616
RNA-Seq Expression	Sed0027048
Synteny	Sed0027048
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0005730 - nucleolus (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR001680 - WD40 repeat IPR007148 - Small-subunit processome, Utp12 IPR011047 - Quinoprotein alcohol dehydrogenase-like superfamily IPR015943 - WD40/YVTN repeat-like-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004136081.1 WD repeat-containing protein 43 isoform X2 [Cucumis sativus]

3.4e-274

82.11

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MKME+LKS PI+AFTPDGDYLAI+SSNG +KIWST DGS LAEWKD DGK   GYSC+ACCF+GKKRKSS CVVAIGTN+G+VLAVNAS+G+ KWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        H GGVIGLSFANKG  L TVG NGMASE DTETGNIIKEFK SKKSISSSAFSLDE++LV AGKKLKILSTD GDEL+VHPDKLGPVK+VS+SDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKHLQVWW ++SAGK SRGP+LSMKHPPFVSECRN+SN+++SV VLSVSVSG AYLWKLK+ SEDEV+PTKV+VK NDNQSAEENHGSAKK R S
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V+ SRIHG+GDNEVSVLVTHGS+DLPQH +L+IGY+ KE  N AHENKTLQQND  SEQGPHEIEQ I TPKSKKSKKKR AS+LDS  AG+VSDVGNGD
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
         SDV FNDDLNEP+MGEKLA+LNL DQN++ GREQE+PSVP IPPSADSVQVLLKQAL ADDRALLLECLYTKD KVISKSI+QLNSSD+L LLH+LIS 
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD
        IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD E ++ND IVPIIYE+ DS+  E+GDEMET+
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        EDDE  EVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

XP_008461080.1 PREDICTED: WD repeat-containing protein 43 [Cucumis melo]

1.6e-279

83.07

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MK E+LKSPPI+AFTPDGDYLAI SSNG +KIWST DGS LAEWKD DGK   GYSC+ACC +GKKRKSS C+VAIGTNNG+VLAVNAS+G+ KWVS GC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        H GGVIGLSFAN+GR LHTVG NGMASE DTETGNIIKEFK SKKSISSSAFSLDEK+L  AGKKLKILS D GDEL+VHPDKL PVK+VSISDDAK I+
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKHLQVWW DMSAGK SRGPVLSM HPPFVSECRN+SN+++SV VLSVSVSG AYLWKLK+ SEDEV PTKV+VK NDNQSAEENHGSAKK R+S
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V+ S+IH +GDNEVSVLVTHGS+DLPQH +L+IGY+ KE  N AHENKTLQQND  SEQGPHEIEQ I TPKSKKSKKKR ASDLDS  AG+VSDVGNGD
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
        ASDV FNDDLNEP+MGEKLA+LNL DQNE+ GREQE+PSVP IPPSADSVQVLLKQAL ADD ALLLECLYTKDDKVISKSI+QLNSSD+LKLLHS+IS 
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD
        IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLD+E ++NDAIVPIIYE+ DS+  E+GDEMETD
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        EDDE  EVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

XP_022150139.1 WD repeat-containing protein 43 [Momordica charantia]

1.9e-277

83.84

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKK--RKSSSCVVAIGTNNGNVLAVNASSGQTKWVSA
        MK EMLKSPPI+AFTPDGDYLAILS N  VKIWS  DGS LAEWKDS+GK   GYSC+ACCFV KK  +K SSCV+AIGT+NG+VLAVNASSG+TKWVSA
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKK--RKSSSCVVAIGTNNGNVLAVNASSGQTKWVSA

Query:  GCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKA
        GCH+GGVIGLSFANKGR L TVG NGMASE DTETGNIIKEFK SKKSISSSAFS DEK+L  AGKKL+ILSTD+GDELMVH DKLGPVK+VSISDDAKA
Subjt:  GCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKA

Query:  IITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKR
        IITSE GAKHLQVWW DMSA KLSRGPVLSMKHPPFVSEC+NISNE++S+ VLSVSVSGVAY+W+LKI SEDEVSP KVTVK ND QSAEENHGSAKK R
Subjt:  IITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKR

Query:  ISVITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGN
        ISVI SRI G GDNEVSVLVTHGSMD PQ  + NIGYS KE +N AHE KTLQQNDD S QGPHEIEQA+TTPKSKKSKKKR ASD+DS  AG+VS VGN
Subjt:  ISVITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGN

Query:  GDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLI
        GDASDV FNDD+NEPTMGEKLA+LNL DQ+E+E  EQEEPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSI+QLNSSD+LKLLHSLI
Subjt:  GDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLI

Query:  SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE---DVDSEESGDEM
        SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLD+EVD+NDAIVPIIYE   D D +ESGDEM
Subjt:  SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE---DVDSEESGDEM

Query:  ETDEDDEGVEVEAFDDDLSAGEVDD
        ETDED+E  E E    DLSAGEVDD
Subjt:  ETDEDDEGVEVEAFDDDLSAGEVDD

XP_022964606.1 WD repeat-containing protein 43 isoform X1 [Cucurbita moschata]

1.3e-273

82.14

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MKME  KSPPI+AFTP+GDYLAILSSNG VKIW+TSDGS LAEWKD DGK  AGYSCIACCFVGKKRK+SSC++AIGTN G+VL VNASSG+TKWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        HLGGVIGLSFA+KGR LHTVG NG+A + + ETG+II EFK SKKSISSSAFSLDEK+L  AGKKLKILSTD G ELMVHPDKLGPVK+ SISDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKH+QVWW DMSAGKLSRGPVLSMKHPPFVSECRNI+N ++S+ VLSVSVSGVAYLWKLK  SED+V+PTKVTVK N+ +SAEENHGSAKK RIS
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V++S I GLGDNEVSVLVTHGSMDLPQH VLNIGY AKE  NIA E           ++GPHEI+QA+T+PKSKKSKKKR ASDLDSQ AG+VSDVGN D
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
         S+V FNDDLNEPTMG+KLA+LNL +QNE+E  EQ+EPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSI+QLNSSD+LKLLH+LISI
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMET
        IQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+E +ENDAIVPIIYE+ DS   E SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMET

Query:  DEDDEGVEVEAFDDDLSAGEVDDDMSE
        DE+  GVEVEAF DDLSAGEVDDDMSE
Subjt:  DEDDEGVEVEAFDDDLSAGEVDDDMSE

XP_038899613.1 WD repeat-containing protein 43 [Benincasa hispida]

5.3e-283

84.03

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MK E+LKSPPI+AFTPDGDYLAILSSNG +KIWST DGS LAEWKD DGK   GYSC+ACCF GKKRK+S CVVA+GTN+G+VLAVNAS+G+ KWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        HLGGVIGLSFANKGR LH VG NG  SE DTETGNIIKEFK SKKSISSS+FSLDEK+L  AGKKLKILS D GDELMVHPDKLGPVK+VS+SDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKHLQVWW DMSAGKLSRGPVLSMKHPPFVSECRN+SN++++V VLSVSVSGVAYLWKLKI SEDEVSPTKV+VK NDNQSAEENHGSAKK R+S
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        VI SRI+G+GDNEVSVLVTHGSMDLPQH + +IGYS KE VN A  NKTLQQNDD SEQGPHE+EQ + TPKSKK KKKR ASDLDS   G++SDVGNGD
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
        ASDV FNDDLNEP+MGEKLA+LNL DQNE+EGRE +EPSVPAIPPSADSVQVLLKQAL A+DR LLLECLYTKDDKVISKSI+QLNSSD+LKLLHSLIS 
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE--DVDSEESGDEMETD
        IQSRGAILVC LPWLRGLLLQHAS+IMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLY+GVLD+EVDENDAIVPIIYE  D D +ESGDEMETD
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE--DVDSEESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        ED+E  EVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBW9 Utp12 domain-containing protein

1.7e-274

82.11

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MKME+LKS PI+AFTPDGDYLAI+SSNG +KIWST DGS LAEWKD DGK   GYSC+ACCF+GKKRKSS CVVAIGTN+G+VLAVNAS+G+ KWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        H GGVIGLSFANKG  L TVG NGMASE DTETGNIIKEFK SKKSISSSAFSLDE++LV AGKKLKILSTD GDEL+VHPDKLGPVK+VS+SDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKHLQVWW ++SAGK SRGP+LSMKHPPFVSECRN+SN+++SV VLSVSVSG AYLWKLK+ SEDEV+PTKV+VK NDNQSAEENHGSAKK R S
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V+ SRIHG+GDNEVSVLVTHGS+DLPQH +L+IGY+ KE  N AHENKTLQQND  SEQGPHEIEQ I TPKSKKSKKKR AS+LDS  AG+VSDVGNGD
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
         SDV FNDDLNEP+MGEKLA+LNL DQN++ GREQE+PSVP IPPSADSVQVLLKQAL ADDRALLLECLYTKD KVISKSI+QLNSSD+L LLH+LIS 
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD
        IQSRGAILVCALPWLR L+LQHAS+IMSQESSLLALNSLYQLIESR STFQSALLLSSSLDFLYT VLD E ++ND IVPIIYE+ DS+  E+GDEMET+
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        EDDE  EVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

A0A1S3CDX9 WD repeat-containing protein 43

7.7e-280

83.07

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MK E+LKSPPI+AFTPDGDYLAI SSNG +KIWST DGS LAEWKD DGK   GYSC+ACC +GKKRKSS C+VAIGTNNG+VLAVNAS+G+ KWVS GC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        H GGVIGLSFAN+GR LHTVG NGMASE DTETGNIIKEFK SKKSISSSAFSLDEK+L  AGKKLKILS D GDEL+VHPDKL PVK+VSISDDAK I+
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKHLQVWW DMSAGK SRGPVLSM HPPFVSECRN+SN+++SV VLSVSVSG AYLWKLK+ SEDEV PTKV+VK NDNQSAEENHGSAKK R+S
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V+ S+IH +GDNEVSVLVTHGS+DLPQH +L+IGY+ KE  N AHENKTLQQND  SEQGPHEIEQ I TPKSKKSKKKR ASDLDS  AG+VSDVGNGD
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
        ASDV FNDDLNEP+MGEKLA+LNL DQNE+ GREQE+PSVP IPPSADSVQVLLKQAL ADD ALLLECLYTKDDKVISKSI+QLNSSD+LKLLHS+IS 
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD
        IQSRGAILVCALPWLRGLLLQHAS+IMSQESSLLALNSLYQLIE+RISTFQSALLLSSSLDFLYTGVLD+E ++NDAIVPIIYE+ DS+  E+GDEMETD
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSE--ESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        EDDE  EVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

A0A6J1D938 WD repeat-containing protein 43

9.4e-278

83.84

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKK--RKSSSCVVAIGTNNGNVLAVNASSGQTKWVSA
        MK EMLKSPPI+AFTPDGDYLAILS N  VKIWS  DGS LAEWKDS+GK   GYSC+ACCFV KK  +K SSCV+AIGT+NG+VLAVNASSG+TKWVSA
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKK--RKSSSCVVAIGTNNGNVLAVNASSGQTKWVSA

Query:  GCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKA
        GCH+GGVIGLSFANKGR L TVG NGMASE DTETGNIIKEFK SKKSISSSAFS DEK+L  AGKKL+ILSTD+GDELMVH DKLGPVK+VSISDDAKA
Subjt:  GCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKA

Query:  IITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKR
        IITSE GAKHLQVWW DMSA KLSRGPVLSMKHPPFVSEC+NISNE++S+ VLSVSVSGVAY+W+LKI SEDEVSP KVTVK ND QSAEENHGSAKK R
Subjt:  IITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKR

Query:  ISVITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGN
        ISVI SRI G GDNEVSVLVTHGSMD PQ  + NIGYS KE +N AHE KTLQQNDD S QGPHEIEQA+TTPKSKKSKKKR ASD+DS  AG+VS VGN
Subjt:  ISVITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGN

Query:  GDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLI
        GDASDV FNDD+NEPTMGEKLA+LNL DQ+E+E  EQEEPSVPAIPPSADSVQVLLKQAL ADDRALLLECLYTKDDKVISKSI+QLNSSD+LKLLHSLI
Subjt:  GDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLI

Query:  SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE---DVDSEESGDEM
        SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSA+LLSSSLDFLYTGVLD+EVD+NDAIVPIIYE   D D +ESGDEM
Subjt:  SIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE---DVDSEESGDEM

Query:  ETDEDDEGVEVEAFDDDLSAGEVDD
        ETDED+E  E E    DLSAGEVDD
Subjt:  ETDEDDEGVEVEAFDDDLSAGEVDD

A0A6J1HI85 WD repeat-containing protein 43 isoform X2

2.7e-269

80.83

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MKME  KSPPI+AFTP+GDYLAILSSNG VKIW+TSDGS LAEWKD DGK  AGYSCIACCFVGKKRK+SSC++AIGTN G+VL VNASSG+TKWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        HLGGVIGLSFA+KGR LHTVG NG+A + + ETG+II EFK SKKSISSSAFSLDEK+L  AGKKLKILSTD G ELMVHPDKLGPVK+ SISDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKH+QVWW DMSAGKLSRGPVLSMKHPPFVSECRNI+N ++S+ VLSVSVSGVAYLWKLK  SED+V+PTKVTVK N+ +SAEENHGSAKK RIS
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGDA
        V++S I GLGDNEVSVLVTHGSMDLPQH VLNI                       ++GPHEI+QA+T+PKSKKSKKKR ASDLDSQ AG+VSDVGN D 
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGDA

Query:  SDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISII
        S+V FNDDLNEPTMG+KLA+LNL +QNE+E  EQ+EPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSI+QLNSSD+LKLLH+LISII
Subjt:  SDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISII

Query:  QSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMETD
        QSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+E +ENDAIVPIIYE+ DS   E SGDEMETD
Subjt:  QSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMETD

Query:  EDDEGVEVEAFDDDLSAGEVDDDMSE
        E+  GVEVEAF DDLSAGEVDDDMSE
Subjt:  EDDEGVEVEAFDDDLSAGEVDDDMSE

A0A6J1HJF3 WD repeat-containing protein 43 isoform X1

6.3e-274

82.14

Show/hide

Query:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC
        MKME  KSPPI+AFTP+GDYLAILSSNG VKIW+TSDGS LAEWKD DGK  AGYSCIACCFVGKKRK+SSC++AIGTN G+VL VNASSG+TKWVSAGC
Subjt:  MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGC

Query:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII
        HLGGVIGLSFA+KGR LHTVG NG+A + + ETG+II EFK SKKSISSSAFSLDEK+L  AGKKLKILSTD G ELMVHPDKLGPVK+ SISDDAK II
Subjt:  HLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAII

Query:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS
        TSE GAKH+QVWW DMSAGKLSRGPVLSMKHPPFVSECRNI+N ++S+ VLSVSVSGVAYLWKLK  SED+V+PTKVTVK N+ +SAEENHGSAKK RIS
Subjt:  TSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRIS

Query:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD
        V++S I GLGDNEVSVLVTHGSMDLPQH VLNIGY AKE  NIA E           ++GPHEI+QA+T+PKSKKSKKKR ASDLDSQ AG+VSDVGN D
Subjt:  VITSRIHGLGDNEVSVLVTHGSMDLPQHIVLNIGYSAKE-VNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGD

Query:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI
         S+V FNDDLNEPTMG+KLA+LNL +QNE+E  EQ+EPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSI+QLNSSD+LKLLH+LISI
Subjt:  ASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISI

Query:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMET
        IQSRGAILVCA+PWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD+E +ENDAIVPIIYE+ DS   E SGDEMET
Subjt:  IQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDS---EESGDEMET

Query:  DEDDEGVEVEAFDDDLSAGEVDDDMSE
        DE+  GVEVEAF DDLSAGEVDDDMSE
Subjt:  DEDDEGVEVEAFDDDLSAGEVDDDMSE

SwissProt top hits

e value

%identity

Alignment

Q15061 WD repeat-containing protein 43

3.2e-09

22.7

Show/hide

Query:  AFTPDGD-YLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFV---------GKKRKSSSC-------VVAIGTNNGNVLAVNASSGQ--T
        AF+P    Y A+ S++G +++W T++     E+  S    +   +C+A              KKRKS +        ++A+GT  G++L  +   G+  +
Subjt:  AFTPDGD-YLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFV---------GKKRKSSSC-------VVAIGTNNGNVLAVNASSGQ--T

Query:  KWVSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSIS
        K +S G H   V  + +      L++   +    E + +T  +  ++K    S+SS   S D K L++AG+ +K+   ++ +          PV  +  +
Subjt:  KWVSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSIS

Query:  D----------DAKAIITSESGAKH---LQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWK-LKIGSEDEVSPTKVTV
                   D    +   SGA H   L VW       + S     ++   P   +     N++  V +  V   G  +L++ +  G   +   +  T+
Subjt:  D----------DAKAIITSESGAKH---LQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWK-LKIGSEDEVSPTKVTV

Query:  KTNDNQSAEENHGSAKKKRISVITSRIHGLGDNEVSVLVTHGSMDLP--QHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKS--KKS
        +           G  KK     I     G   +++S+L+ +GS   P  + + LN          + E       D S+   P ++E AIT  ++    S
Subjt:  KTNDNQSAEENHGSAKKKRISVITSRIHGLGDNEVSVLVTHGSMDLP--QHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKS--KKS

Query:  KKKRTASDLDSQAAGNVSDVGNGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDK
        + K     +    A         +  +       NE ++ E+L  ++++    ++G+E  +          +S  VLL Q L ++D  +L + L T++  
Subjt:  KKKRTASDLDSQAAGNVSDVGNGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDK

Query:  VISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDEND
        +I K++ ++    I+ LL  L   +Q      V  + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V   E  +  
Subjt:  VISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDEND

Query:  AI----VPIIYEDVDSEESGDEMETDEDDEGVEVEAFDDDLSAGEVDDDMSE
                ++YE+  SEE  D+   D+D E    E  D++ S  E D+D+ E
Subjt:  AI----VPIIYEDVDSEESGDEMETDEDDEGVEVEAFDDDLSAGEVDDDMSE

Q6ZQL4 WD repeat-containing protein 43

8.5e-10

23.15

Show/hide

Query:  AFTPDGD-YLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACC---------FVGKKRKS-------SSCVVAIGTNNGNVLAVNASSGQT-K
        AF+PD   Y A+ SS+G +++W T++     E+  S    +   +C+A              KKRKS        + ++A+GT  G++L  +   G+   
Subjt:  AFTPDGD-YLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACC---------FVGKKRKS-------SSCVVAIGTNNGNVLAVNASSGQT-K

Query:  WVSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGD---ELMVHPDKLGPVKIVS
         +++G H   V  + +      L++   +    E  T+T  +  ++K    S+SS   S D K L++AG+ +K+   ++ +       H   +  ++  +
Subjt:  WVSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGD---ELMVHPDKLGPVKIVS

Query:  ISDDAKAIITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENH
        I  +        +G   L              G V    H   ++  +  S      AV+S +V+       L + SE++  P K+ V   D Q     H
Subjt:  ISDDAKAIITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENH

Query:  ---GSAKKKRISVITSRIHGLGD------------------NEVSVLVTHGSMDLPQHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTP
           G  KK   S  T +I   G                   +++S+L+ +G+   P   +  +  ++K+ +I  E        D S      +E AIT  
Subjt:  ---GSAKKKRISVITSRIHGLGD------------------NEVSVLVTHGSMDLPQHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTP

Query:  KS--KKSKKKRTASDLDSQAAGNVSDVGNGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLEC
        K+    S+ K     +    A           ++        E T+ E+L  ++L    + +GR+ +           +S  VLL Q L ++D  +L + 
Subjt:  KS--KKSKKKRTASDLDSQAAGNVSDVGNGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLEC

Query:  LYTKDDKVISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD
        L TK+  +I +++ ++    ++ LL  L   +Q         + WL+ +L  HAS + +    +  L +LYQL+ESR+ TFQ    L   L  L T V  
Subjt:  LYTKDDKVISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLD

Query:  DEVDEN----DAIVPIIYEDVDSEESGDE--METDEDDEGVEVEAFDDDLSAGEVDDDMSE
         E  +          ++YE+  SEE  D+   E D DD   E E  D +   G VD+D  E
Subjt:  DEVDEN----DAIVPIIYEDVDSEESGDE--METDEDDEGVEVEAFDDDLSAGEVDDDMSE

Arabidopsis top hits

e value

%identity

Alignment

AT1G15420.1 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12 (InterPro:IPR007148); Has 764 Blast hits to 656 proteins in 193 species: Archae - 0; Bacteria - 42; Metazoa - 237; Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes - 223 (source: NCBI BLink).

6.4e-45

45.85

Show/hide

Query:  SSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVG-NGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPA--IPPSADSVQV
        SS+      +  +   K KK  KKR   + D     +  D G + D   V  +D LNEPT+G+KL +L+L +  +    E    S P    PP+A SV V
Subjt:  SSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVG-NGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPA--IPPSADSVQV

Query:  LLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS
        LL+QAL ADDR+LLL+CLY +D++VI+ S+++LNS+++LKLL++L+ I+QSRGAIL C +PW++ LLL H+S IMSQESSLLALN++YQLIESR+ST  +
Subjt:  LLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQS

Query:  ALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSEESGDE-----METDEDDEGVEVEAFDDDLSAGEVDDDMSE
        A+ +SS LD +      D++DE +   P+IYED DS+E  +E     METDE+ +    EA  D ++  E  DDMS+
Subjt:  ALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSEESGDE-----METDEDDEGVEVEAFDDDLSAGEVDDDMSE

AT5G11240.1 transducin family protein / WD-40 repeat family protein

1.2e-30

25.94

Show/hide

Query:  ISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKD-------------SDGKAAAGYSCIACCFV--GKKRKSSSCVVAIGTNNGNVLAVNASSGQTKW
        +++F+P  DYLA+ + +G +KIW T  G    E+ D               G  +  Y+C+    +   KKRK  + V+ +GT  G+VLA++ +SGQ KW
Subjt:  ISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKD-------------SDGKAAAGYSCIACCFV--GKKRKSSSCVVAIGTNNGNVLAVNASSGQTKW

Query:  VSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDD
          + CH GGV  +S + K   +++ G +GM  + D  +GN+I++FK S K++SS   S D K LV A  +LK  +     ++       G V+ V+ ++D
Subjt:  VSAGCHLGGVIGLSFANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDD

Query:  AKAIITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDE----VSPTKVTVKTNDNQSAEENH
         K +++S  G +++ VW +D  A K S   VL+++HPP   +    +NE   + VL++S  GV Y W    GS  E     +PTKV + T     A+ + 
Subjt:  AKAIITSESGAKHLQVWWSDMSAGKLSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDE----VSPTKVTVKTNDNQSAEENH

Query:  GSAKKKRISVITSRIHG-LGDNEVSVLVTHGSMDLP--QHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQA
           K     +  +++ G L        +  G +  P  Q +VL  G                 ND         I   IT   SK SK++   + + +  
Subjt:  GSAKKKRISVITSRIHG-LGDNEVSVLVTHGSMDLP--QHIVLNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQA

Query:  AGNVSDVGNGDASDVPFND----DLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQL
          +  D     A     ++     L+       +   +  D  E    E +  S+  +  + +   +     +   D    L        K +  ++  +
Subjt:  AGNVSDVGNGDASDVPFND----DLNEPTMGEKLATLNLNDQNEEEGREQEEPSVPAIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQL

Query:  NSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE
          S   K L +L ++ Q+R       LPW+  +++ H+  IMSQE  +   LN+L ++ +SR +  Q  L LS  L  L T  ++        I      
Subjt:  NSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQE-SSLLALNSLYQLIESRISTFQSALLLSSSLDFLYTGVLDDEVDENDAIVPIIYE

Query:  DVDSEESGDEMETDEDDEGVEVEAFDDDLSAGEVDD
        D + +ES DE E D +D        + DLS+ +  D
Subjt:  DVDSEESGDEMETDEDDEGVEVEAFDDDLSAGEVDD

Sequences

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CDS sequence

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ATGAAGATGGAAATGCTGAAATCGCCGCCGATCTCAGCTTTCACTCCCGACGGCGATTATCTAGCCATCTTGTCCTCCAATGGAGCCGTTAAGATTTGGAGTACTAGTGA
TGGGAGTTCACTGGCGGAGTGGAAGGATTCTGATGGAAAAGCTGCTGCTGGTTATTCATGTATTGCCTGCTGTTTTGTGGGAAAAAAGCGTAAAAGCAGTTCTTGTGTAG
TTGCTATTGGTACCAACAATGGGAATGTGTTGGCTGTAAATGCTTCAAGCGGCCAGACGAAGTGGGTCTCTGCAGGTTGCCATCTTGGTGGAGTTATTGGCCTTTCTTTT
GCAAACAAAGGCCGTAGTCTGCATACGGTTGGCTGTAACGGAATGGCATCCGAGAGGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAACTTCAAAAAAATCAAT
CTCTTCTTCAGCATTTTCCCTTGATGAGAAGCACTTAGTTGCAGCGGGCAAGAAGTTGAAGATTTTAAGCACAGATAGTGGAGATGAGCTTATGGTGCACCCTGATAAAT
TGGGTCCTGTGAAGATTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATCTGGAGCCAAACATCTTCAAGTCTGGTGGTCTGATATGAGTGCTGGAAAA
CTTAGCAGAGGTCCTGTCCTGTCCATGAAGCATCCTCCCTTTGTTTCTGAATGCAGAAATATTAGCAATGAAGACAATAGTGTAGCCGTCTTGTCGGTATCGGTATCAGG
TGTAGCTTATTTATGGAAATTAAAGATTGGGTCAGAAGACGAGGTTAGTCCAACTAAAGTCACTGTAAAAACTAACGACAACCAATCAGCTGAGGAGAACCATGGAAGTG
CTAAGAAGAAGCGAATTTCTGTCATCACTTCGAGAATACATGGTTTAGGAGACAATGAGGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCTACCGCAGCATATTGTA
CTTAATATTGGTTATTCCGCGAAGGAAGTAAATATTGCGCATGAGAATAAAACTCTCCAACAAAATGATGATTCTTCCGAACAAGGTCCTCATGAGATTGAACAAGCCAT
CACTACACCTAAAAGTAAGAAAAGCAAAAAGAAGAGAACAGCATCTGATTTAGACAGTCAGGCAGCTGGAAATGTCAGTGATGTTGGCAACGGAGATGCTTCTGATGTCC
CATTTAATGATGATTTAAATGAGCCAACCATGGGAGAAAAACTTGCAACTTTGAATTTGAATGACCAGAATGAAGAAGAAGGTCGTGAGCAAGAAGAACCTTCCGTTCCG
GCAATACCACCGAGTGCGGACTCTGTTCAGGTTTTGCTTAAGCAAGCACTACGTGCAGATGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTTAT
CTCAAAATCAATTTCTCAACTAAATTCTTCTGATATTCTCAAGCTTTTGCACTCCCTGATATCCATTATCCAGTCAAGAGGGGCGATTCTTGTATGTGCCCTCCCTTGGC
TGAGAGGCTTACTTCTCCAACATGCTAGTAGAATAATGTCTCAAGAATCTTCTCTTCTCGCCTTGAATTCTCTATATCAGCTGATTGAGTCTAGAATTTCAACTTTCCAA
TCGGCTCTTCTGCTATCAAGTAGCTTAGACTTCCTTTACACAGGAGTCCTTGATGACGAGGTGGACGAAAATGACGCCATTGTGCCAATCATTTACGAGGATGTCGATAG
CGAGGAATCGGGAGATGAAATGGAAACGGATGAAGATGATGAAGGGGTTGAAGTAGAAGCATTTGATGATGATCTTAGTGCTGGTGAAGTTGATGATGACATGAGTGAGT
GA

mRNA sequence

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AACGCCAAAACCCTCAAAATCAGGCTGCGGAAAAGTGCCGTTCGTCCCTCCAAAGCTCAGAGATTTTGCAGTTCGTAGTTTTCAATAACAACTGAGACAAATGAAGATGG
AAATGCTGAAATCGCCGCCGATCTCAGCTTTCACTCCCGACGGCGATTATCTAGCCATCTTGTCCTCCAATGGAGCCGTTAAGATTTGGAGTACTAGTGATGGGAGTTCA
CTGGCGGAGTGGAAGGATTCTGATGGAAAAGCTGCTGCTGGTTATTCATGTATTGCCTGCTGTTTTGTGGGAAAAAAGCGTAAAAGCAGTTCTTGTGTAGTTGCTATTGG
TACCAACAATGGGAATGTGTTGGCTGTAAATGCTTCAAGCGGCCAGACGAAGTGGGTCTCTGCAGGTTGCCATCTTGGTGGAGTTATTGGCCTTTCTTTTGCAAACAAAG
GCCGTAGTCTGCATACGGTTGGCTGTAACGGAATGGCATCCGAGAGGGACACTGAAACAGGAAACATTATCAAGGAGTTCAAAACTTCAAAAAAATCAATCTCTTCTTCA
GCATTTTCCCTTGATGAGAAGCACTTAGTTGCAGCGGGCAAGAAGTTGAAGATTTTAAGCACAGATAGTGGAGATGAGCTTATGGTGCACCCTGATAAATTGGGTCCTGT
GAAGATTGTTTCTATATCTGATGATGCCAAAGCAATAATTACATCAGAATCTGGAGCCAAACATCTTCAAGTCTGGTGGTCTGATATGAGTGCTGGAAAACTTAGCAGAG
GTCCTGTCCTGTCCATGAAGCATCCTCCCTTTGTTTCTGAATGCAGAAATATTAGCAATGAAGACAATAGTGTAGCCGTCTTGTCGGTATCGGTATCAGGTGTAGCTTAT
TTATGGAAATTAAAGATTGGGTCAGAAGACGAGGTTAGTCCAACTAAAGTCACTGTAAAAACTAACGACAACCAATCAGCTGAGGAGAACCATGGAAGTGCTAAGAAGAA
GCGAATTTCTGTCATCACTTCGAGAATACATGGTTTAGGAGACAATGAGGTGTCAGTTCTTGTTACTCATGGCTCCATGGACCTACCGCAGCATATTGTACTTAATATTG
GTTATTCCGCGAAGGAAGTAAATATTGCGCATGAGAATAAAACTCTCCAACAAAATGATGATTCTTCCGAACAAGGTCCTCATGAGATTGAACAAGCCATCACTACACCT
AAAAGTAAGAAAAGCAAAAAGAAGAGAACAGCATCTGATTTAGACAGTCAGGCAGCTGGAAATGTCAGTGATGTTGGCAACGGAGATGCTTCTGATGTCCCATTTAATGA
TGATTTAAATGAGCCAACCATGGGAGAAAAACTTGCAACTTTGAATTTGAATGACCAGAATGAAGAAGAAGGTCGTGAGCAAGAAGAACCTTCCGTTCCGGCAATACCAC
CGAGTGCGGACTCTGTTCAGGTTTTGCTTAAGCAAGCACTACGTGCAGATGATCGTGCCCTTTTGCTAGAATGCTTATACACCAAGGATGATAAGGTTATCTCAAAATCA
ATTTCTCAACTAAATTCTTCTGATATTCTCAAGCTTTTGCACTCCCTGATATCCATTATCCAGTCAAGAGGGGCGATTCTTGTATGTGCCCTCCCTTGGCTGAGAGGCTT
ACTTCTCCAACATGCTAGTAGAATAATGTCTCAAGAATCTTCTCTTCTCGCCTTGAATTCTCTATATCAGCTGATTGAGTCTAGAATTTCAACTTTCCAATCGGCTCTTC
TGCTATCAAGTAGCTTAGACTTCCTTTACACAGGAGTCCTTGATGACGAGGTGGACGAAAATGACGCCATTGTGCCAATCATTTACGAGGATGTCGATAGCGAGGAATCG
GGAGATGAAATGGAAACGGATGAAGATGATGAAGGGGTTGAAGTAGAAGCATTTGATGATGATCTTAGTGCTGGTGAAGTTGATGATGACATGAGTGAGTGATTATATGA
TGAAGCTACAAAATCCTGTGGGATTTTCATTTTTTTGACCTTTTTTGACGTGATTACTCTCTTAATGAATGAGAATTATATCTTAAAAACCCATTGCCAAGTTTCAAACT
TGTGTGTTCTCATATTTTATTTGCTAAAAAAAGAAAGAAAACTCATTATGCACAAAATTGCCATTTGGTTCATCTTTGCAAAAAACTGTCACTTCGCGAATAACCTATGT
TTGAGATATTTGGATTTAGAAAAGGTGTATGTTTGAGATACATATTAGTATG

Protein sequence

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MKMEMLKSPPISAFTPDGDYLAILSSNGAVKIWSTSDGSSLAEWKDSDGKAAAGYSCIACCFVGKKRKSSSCVVAIGTNNGNVLAVNASSGQTKWVSAGCHLGGVIGLSF
ANKGRSLHTVGCNGMASERDTETGNIIKEFKTSKKSISSSAFSLDEKHLVAAGKKLKILSTDSGDELMVHPDKLGPVKIVSISDDAKAIITSESGAKHLQVWWSDMSAGK
LSRGPVLSMKHPPFVSECRNISNEDNSVAVLSVSVSGVAYLWKLKIGSEDEVSPTKVTVKTNDNQSAEENHGSAKKKRISVITSRIHGLGDNEVSVLVTHGSMDLPQHIV
LNIGYSAKEVNIAHENKTLQQNDDSSEQGPHEIEQAITTPKSKKSKKKRTASDLDSQAAGNVSDVGNGDASDVPFNDDLNEPTMGEKLATLNLNDQNEEEGREQEEPSVP
AIPPSADSVQVLLKQALRADDRALLLECLYTKDDKVISKSISQLNSSDILKLLHSLISIIQSRGAILVCALPWLRGLLLQHASRIMSQESSLLALNSLYQLIESRISTFQ
SALLLSSSLDFLYTGVLDDEVDENDAIVPIIYEDVDSEESGDEMETDEDDEGVEVEAFDDDLSAGEVDDDMSE

Sed0027048 (gene) of Chayote v1 genome