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Sed0027082 (gene) of Chayote v1 genome

Gene IDSed0027082
OrganismSechium edule (Chayote v1)
DescriptionCoiled-coil domain-containing protein 18, putative isoform 2
Genome locationLG05:46210367..46210991
RNA-Seq ExpressionSed0027082
SyntenySed0027082
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605318.1 hypothetical protein SDJN03_02635, partial [Cucurbita argyrosperma subsp. sororia]2.5e-2771.58Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        M RID KSSIENEPRTLKMHQIQFAREAALYVINT++IEEA  IFT+GLE +ECKA++D+DS M++C H     EEE+DE  SL+ L DIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

XP_008460897.1 PREDICTED: uncharacterized protein LOC103499638 [Cucumis melo]2.8e-2671.13Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV--KDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        MG ID KSSIENEPRTLKM+QIQFAREAALYV+NT TIEEA  IFT+GL+P+ECKA+  +DKDSIM++ YH     +EEIDE Q    LRDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV--KDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

XP_011649401.1 uncharacterized protein LOC105434623 [Cucumis sativus]1.1e-2571.13Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV-KDKDSIMESCYHKEEEEEEEIDE-FQSLFPLRDIVSAPF
        MG ID KSSIENEPRTLKMHQIQFAREAALYV+NT TIEEA  IFT+GL+P+ECKA+ +DKDSI+++ YH     +EEIDE  Q  + LRDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV-KDKDSIMESCYHKEEEEEEEIDE-FQSLFPLRDIVSAPF

XP_022947894.1 uncharacterized protein LOC111451648 [Cucurbita moschata]2.8e-2669.47Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        M RID KSSIENEPRTLKMHQIQFAREAALYVINT++IEEA  IFT+GLE +ECK ++D+DS M++C H     EEE+DE  S + L DIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

XP_038902606.1 uncharacterized protein LOC120089256 [Benincasa hispida]1.3e-2873.68Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        MG ID KSSIENEPRTL+MHQIQFAREAALYVINT TIEEA  IFT+GL+P+ECKA++DKDSIM + YH+EE+     DE QSL+  RDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

TrEMBL top hitse value%identityAlignment
A0A0A0LQ89 Uncharacterized protein5.1e-2671.13Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV-KDKDSIMESCYHKEEEEEEEIDE-FQSLFPLRDIVSAPF
        MG ID KSSIENEPRTLKMHQIQFAREAALYV+NT TIEEA  IFT+GL+P+ECKA+ +DKDSI+++ YH     +EEIDE  Q  + LRDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV-KDKDSIMESCYHKEEEEEEEIDE-FQSLFPLRDIVSAPF

A0A1S3CDH2 uncharacterized protein LOC1034996381.3e-2671.13Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV--KDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        MG ID KSSIENEPRTLKM+QIQFAREAALYV+NT TIEEA  IFT+GL+P+ECKA+  +DKDSIM++ YH     +EEIDE Q    LRDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAV--KDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

A0A6J1DBC1 uncharacterized protein LOC1110189152.0e-2263.16Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        MGRID KSSIENEPRTLKMHQIQFAREAALY++NT TI+EA  IFT+GLE +ECKA +D++    +   K+   EEE+ + + L+  RDIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

A0A6J1G887 uncharacterized protein LOC1114516481.3e-2669.47Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF
        M RID KSSIENEPRTLKMHQIQFAREAALYVINT++IEEA  IFT+GLE +ECK ++D+DS M++C H     EEE+DE  S + L DIVSAPF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF

B9HEJ9 Uncharacterized protein2.4e-1556.7Show/hide
Query:  RIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSI--MESCYHKE--EEEEEEIDEFQSLFPLRDIVSAPF
        RID K+SIE EPRTL+M QIQFAREAALYV+NT++IE A +IFT+G+EP+   A ++ D+I  ME    K+  E E+E+ DE   L  +RDI SAPF
Subjt:  RIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSI--MESCYHKE--EEEEEEIDEFQSLFPLRDIVSAPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G33467.1 unknown protein2.8e-0837.37Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYH-KEEEEEEEIDEFQSLF---PLRDIVSAPF
        M  ++ +SSIE EP TL + Q++ ARE ALYV+ T T+EEA  IFTK       +A +++      C + K+EE++++ ++ + +F      DI +APF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYH-KEEEEEEEIDEFQSLF---PLRDIVSAPF

AT4G33467.2 unknown protein4.8e-0836.36Show/hide
Query:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYH-KEEEEEEEIDEFQSLF---PLRDIVSAPF
        M  ++ +SSIE EP TL + Q++ ARE ALYV+ T T+EEA  IFTK       + ++  +     C + K+EE++++ ++ + +F      DI +APF
Subjt:  MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYH-KEEEEEEEIDEFQSLF---PLRDIVSAPF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAATTGATACAAAATCATCCATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTCGCTAGAGAAGCTGCACTCTATGTGATAAACACAAACAC
CATAGAAGAAGCAACGGCCATTTTCACCAAGGGATTAGAACCACTGGAATGTAAAGCAGTTAAGGATAAAGATTCAATCATGGAAAGTTGCTACCATAAAGAAGAAGAAG
AAGAAGAAGAAATTGATGAATTTCAATCTCTTTTTCCACTTAGAGACATTGTCTCTGCCCCTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGAATTGATACAAAATCATCCATTGAAAATGAGCCAAGGACTCTCAAAATGCATCAAATCCAATTCGCTAGAGAAGCTGCACTCTATGTGATAAACACAAACAC
CATAGAAGAAGCAACGGCCATTTTCACCAAGGGATTAGAACCACTGGAATGTAAAGCAGTTAAGGATAAAGATTCAATCATGGAAAGTTGCTACCATAAAGAAGAAGAAG
AAGAAGAAGAAATTGATGAATTTCAATCTCTTTTTCCACTTAGAGACATTGTCTCTGCCCCTTTTTAA
Protein sequenceShow/hide protein sequence
MGRIDTKSSIENEPRTLKMHQIQFAREAALYVINTNTIEEATAIFTKGLEPLECKAVKDKDSIMESCYHKEEEEEEEIDEFQSLFPLRDIVSAPF