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Sed0027084 (gene) of Chayote v1 genome

Gene IDSed0027084
OrganismSechium edule (Chayote v1)
DescriptionAuxin responsive SAUR protein
Genome locationLG01:69901393..69901779
RNA-Seq ExpressionSed0027084
SyntenySed0027084
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038583.1 Auxin responsive SAUR protein [Cucumis melo var. makuwa]5.6e-3866.18Show/hide
Query:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD
        M CLVLPCY MKRR     RPH  Y  L+KS   R+D  +   SLV VV  KE+REF VDPFVLEENPFR LIEK G +  +D++G+     ++RVIF+D
Subjt:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD

Query:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        VDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

XP_008465964.1 PREDICTED: uncharacterized protein LOC103503536 [Cucumis melo]5.6e-3866.18Show/hide
Query:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD
        M CLVLPCY MKRR     RPH  Y  L+KS   R+D  +   SLV VV  KE+REF VDPFVLEENPFR LIEK G +  +D++G+     ++RVIF+D
Subjt:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD

Query:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        VDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

XP_011652654.1 auxin-responsive protein SAUR78 [Cucumis sativus]1.5e-3866.91Show/hide
Query:  MDCLVLPCYAMKRRR------PHHAYRCLNKS-----ELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVI
        M CLVLPCY MKRRR      PH  Y  LNKS     E + D    SLV VV  KE+REF VDPFVLEENPFR+LIEK G ++ ED++G+     R+RVI
Subjt:  MDCLVLPCYAMKRRR------PHHAYRCLNKS-----ELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVI

Query:  FLDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        F+DVDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  FLDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

XP_022159663.1 uncharacterized protein LOC111026008 [Momordica charantia]5.1e-3160.58Show/hide
Query:  MDCLVLPCYAMKRRRPHHA--YRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEK---EDDNGEIW-----QEGRRRVIF
        MDCLVLPC+AMKRRRP  A  YR L      +D   ES VTVVV KEKR F VDPFVLE+NPFRVL++ +  E +    DD+ + W     +  RRRVI 
Subjt:  MDCLVLPCYAMKRRRPHHA--YRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEK---EDDNGEIW-----QEGRRRVIF

Query:  LDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQD
        +DVDAILFEHLLWL+YND  SLF LNVEEIL+FY+ D
Subjt:  LDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQD

XP_038888374.1 uncharacterized protein LOC120078224 [Benincasa hispida]3.9e-3970.37Show/hide
Query:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE-SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEG-RRRVIFLDV
        MDCLVLPCY MKRR     RP   Y  LNKS + R D  E SLV VV  KEKREF VDPFVLEENPFR+LIEK G     DDN +  ++G R+RVIF+DV
Subjt:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE-SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEG-RRRVIFLDV

Query:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        D+ILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  DAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

TrEMBL top hitse value%identityAlignment
A0A0A0LK59 Uncharacterized protein7.1e-3966.91Show/hide
Query:  MDCLVLPCYAMKRRR------PHHAYRCLNKS-----ELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVI
        M CLVLPCY MKRRR      PH  Y  LNKS     E + D    SLV VV  KE+REF VDPFVLEENPFR+LIEK G ++ ED++G+     R+RVI
Subjt:  MDCLVLPCYAMKRRR------PHHAYRCLNKS-----ELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVI

Query:  FLDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        F+DVDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  FLDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

A0A1S3CQ48 uncharacterized protein LOC1035035362.7e-3866.18Show/hide
Query:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD
        M CLVLPCY MKRR     RPH  Y  L+KS   R+D  +   SLV VV  KE+REF VDPFVLEENPFR LIEK G +  +D++G+     ++RVIF+D
Subjt:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD

Query:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        VDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

A0A5D3E5S1 Auxin responsive SAUR protein2.7e-3866.18Show/hide
Query:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD
        M CLVLPCY MKRR     RPH  Y  L+KS   R+D  +   SLV VV  KE+REF VDPFVLEENPFR LIEK G +  +D++G+     ++RVIF+D
Subjt:  MDCLVLPCYAMKRR-----RPHHAYRCLNKSELVRDDVGE---SLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD

Query:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        VDAILFEHLLWLMYNDCSSLFKLNVEEILDFY+QDF
Subjt:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

A0A5N6R649 Uncharacterized protein9.3e-3159.56Show/hide
Query:  MDCLVLP------CYAMKRRRPHHAYRCLNKSELVRDDVGES--LVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD
        MDCLVLP      CY    + P   YR      L +D   ES  LVTVVV KEKREF VDPFVL+ENPFRVLIE     +K+ D  E  +   +RVIF+D
Subjt:  MDCLVLP------CYAMKRRRPHHAYRCLNKSELVRDDVGES--LVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD

Query:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF
        VDAILFEH+LWLMYNDCSSLFKLN++EI+DFY+ DF
Subjt:  VDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQDF

A0A6J1DZG4 uncharacterized protein LOC1110260082.4e-3160.58Show/hide
Query:  MDCLVLPCYAMKRRRPHHA--YRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEK---EDDNGEIW-----QEGRRRVIF
        MDCLVLPC+AMKRRRP  A  YR L      +D   ES VTVVV KEKR F VDPFVLE+NPFRVL++ +  E +    DD+ + W     +  RRRVI 
Subjt:  MDCLVLPCYAMKRRRPHHA--YRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEK---EDDNGEIW-----QEGRRRVIF

Query:  LDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQD
        +DVDAILFEHLLWL+YND  SLF LNVEEIL+FY+ D
Subjt:  LDVDAILFEHLLWLMYNDCSSLFKLNVEEILDFYSQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35290.1 unknown protein2.3e-1842.19Show/hide
Query:  MDCLVLPCYAMKRRRPHHAYRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD-VDAILFE
        M CL+ P   ++R     + R   ++  + +++ + ++ VVV KEK+EF V+P+VLEE PFRVLI       K+     + + G  RV++LD VD+ILFE
Subjt:  MDCLVLPCYAMKRRRPHHAYRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLD-VDAILFE

Query:  HLLWLMYNDCSSLFKLNVEEILDFYSQD
        HLLWL+ ND S+   L+V EI++FY+QD
Subjt:  HLLWLMYNDCSSLFKLNVEEILDFYSQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGCTTGGTCCTCCCTTGCTACGCCATGAAGAGACGACGACCGCACCATGCCTACCGCTGCCTCAACAAATCAGAGCTTGTTCGCGACGATGTCGGGGAAAGTCT
GGTGACGGTGGTGGTGGAGAAAGAGAAGAGAGAATTTTTTGTAGATCCTTTCGTGTTAGAAGAGAACCCGTTTCGGGTTTTAATCGAAAAGAGAGGAGTGGAAGAGAAAG
AGGATGATAATGGAGAGATTTGGCAAGAGGGAAGAAGAAGAGTGATATTCCTTGATGTAGATGCTATTTTGTTTGAGCACTTGCTTTGGCTGATGTACAATGATTGTTCT
TCCTTGTTTAAACTCAATGTTGAGGAAATTCTTGACTTTTATTCTCAAGATTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGCTTGGTCCTCCCTTGCTACGCCATGAAGAGACGACGACCGCACCATGCCTACCGCTGCCTCAACAAATCAGAGCTTGTTCGCGACGATGTCGGGGAAAGTCT
GGTGACGGTGGTGGTGGAGAAAGAGAAGAGAGAATTTTTTGTAGATCCTTTCGTGTTAGAAGAGAACCCGTTTCGGGTTTTAATCGAAAAGAGAGGAGTGGAAGAGAAAG
AGGATGATAATGGAGAGATTTGGCAAGAGGGAAGAAGAAGAGTGATATTCCTTGATGTAGATGCTATTTTGTTTGAGCACTTGCTTTGGCTGATGTACAATGATTGTTCT
TCCTTGTTTAAACTCAATGTTGAGGAAATTCTTGACTTTTATTCTCAAGATTTTTAA
Protein sequenceShow/hide protein sequence
MDCLVLPCYAMKRRRPHHAYRCLNKSELVRDDVGESLVTVVVEKEKREFFVDPFVLEENPFRVLIEKRGVEEKEDDNGEIWQEGRRRVIFLDVDAILFEHLLWLMYNDCS
SLFKLNVEEILDFYSQDF