CuGenDBv2

Gene ID	Sed0027097
Organism	Sechium edule (Chayote v1)
Description	40S ribosomal protein S3a
Genome location	LG12:5973757..5976739
RNA-Seq Expression	Sed0027097
Synteny	Sed0027097
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022627 - cytosolic small ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR001593 - Ribosomal protein S3Ae IPR018281 - Ribosomal protein S3Ae, conserved site IPR027500 - 40S ribosomal protein S1/3, eukaryotes

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008438626.1 PREDICTED: 40S ribosomal protein S3a [Cucumis melo]

4.3e-138

97.32

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

XP_022974423.1 40S ribosomal protein S3a isoform X1 [Cucurbita maxima]

8.7e-139

98.08

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E PTEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

XP_022979234.1 40S ribosomal protein S3a-like [Cucurbita maxima]

1.1e-138

98.08

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

XP_023527182.1 40S ribosomal protein S3a-like [Cucurbita pepo subsp. pepo]

2.5e-138

97.7

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

XP_038875051.1 40S ribosomal protein S3a [Benincasa hispida]

3.3e-138

97.32

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIM+NQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E  TEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AXI4 40S ribosomal protein S3a

2.1e-138

97.32

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFE+SLADLQ DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

A0A6J1G8R6 40S ribosomal protein S3a

2.1e-138

97.7

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E PTEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

A0A6J1GW62 40S ribosomal protein S3a

2.1e-138

97.7

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTD+YTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

A0A6J1IG66 40S ribosomal protein S3a

4.2e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA  E PTEIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

A0A6J1IW45 40S ribosomal protein S3a

5.5e-139

98.08

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ+DEEHAYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEA AE  TE+VGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

SwissProt top hits

e value

%identity

Alignment

A5B4K1 40S ribosomal protein S3a-1

1.5e-128

88.51

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF V+NVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE+ AYRKIRLRAEDVQGRNVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLR+FCI FTK+R NQ K+TCYAQSSQIRQIRRKMREIM N A+SCDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNV+IRKVKILKAPKFDLGKLMEVHGDYSEDVG K+ERPADE  AE  TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

P33444 40S ribosomal protein S3a

1.2e-127

87.4

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPFAKKDWYDIKAPSVF+V+NVGKTLVTRTQGTKIASEGL+HRVFE+SLADLQ DE+H++RKIRLRAED+QG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLVRKW +LIEAHVDVKTTD+YTLRMFCIGFTK+R NQ KRTCYAQSSQIRQIRRKMREIMVNQA SCDLK+LV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY+E D+G K++RPA+EA AE PTE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSE-DVGVKVERPADEAEAEAPTEIVGA

P49198 40S ribosomal protein S3a

5.5e-128

87.74

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPS+F  +NVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDE+H+YRKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+ TTDKLRSLV+KW +LIEAHVDVKTTDN+TLRMFCIGFTK+R NQVKRTCYAQSSQI+QIRRKMREIMV QA +CDLKELV+KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RPA+EA  EA TE++GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

Q285L8 40S ribosomal protein S3a

2.7e-127

88.12

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DP+AKKDWYDIKAPSVF +KNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQ DE+ ++RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLRMFCI FTK+RPNQ KRTCYAQSSQIRQIRRKM EIM NQASSCDLKELV KFIPESIG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSI+PLQNV+IRKVKILKAPKFD+GKLMEVHGDYSEDVGVK++RPADE  AEA  EI GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

Q8GTE3 40S ribosomal protein S3a

7.7e-130

90.42

Show/hide

Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKGKKGGKKKA DPF+KKDWYDIKAPSVF VKNVGKTLV+RTQGTKIASEGLKHRVFE+SLADLQ DE++A+RKIRLRAEDVQG+NVLTNF
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        +GM+FTTDKLRSLVRKW TLIEAHVDVKTTDNYTLRMFCIGFTKRR NQVKRTCYAQSSQIRQIRRKMREIMVNQA+SCDLKELVRKFIPE IGKEIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA
        TSSIYPLQNVFIRKVKILK+PKFDLGKLMEVHGDYSEDVG KVE PADE   E   EIVGA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

Arabidopsis top hits

e value

%identity

Alignment

AT3G04840.1 Ribosomal protein S3Ae

3.1e-126

85.88

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAPS+FT +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQ DE++AYRKIRLRAEDVQGRNVL  F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD+YTLR+FCI FTKRR NQVKRTCYAQSSQIRQIRRKMR+IMV +ASSCDLK+LV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVERPADEAEAEAPTEIVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLM+VHGDYS EDVGVKV+RPADE   E PTEI+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYS-EDVGVKVERPADEAEAEAPTEIVGA

AT4G34670.1 Ribosomal protein S3Ae

8.2e-127

87.02

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Query:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF
        MAVGKNKRISKG+KGGKKKA DPF+KKDWYD+KAP  FT +NVGKTLV+RTQGTKIASEGLKHRVFEVSLADLQNDE++AYRKIRLRAEDVQGRNVLT F
Subjt:  MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNF

Query:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA
        WGM+FTTDKLRSLV+KW TLIEAHVDVKTTD YTLRMFCI FTKRR NQVKRTCYAQSSQIRQIRRKM EIMV +ASSCDLKELV KFIPE+IG+EIEKA
Subjt:  WGMNFTTDKLRSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKA

Query:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVERPADEAEAEAPTEIVGA
        T  IYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY +EDVGVKV+RPADE   E PTEI+GA
Subjt:  TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDY-SEDVGVKVERPADEAEAEAPTEIVGA

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCCACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCGCCTTCTGT
TTTCACTGTTAAGAATGTGGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGCTTCTGAAGGACTCAAGCATAGAGTCTTCGAAGTCTCGTTGGCTGATCTTC
AGAATGATGAGGAGCACGCATACAGGAAGATTCGGTTGAGAGCAGAAGATGTTCAAGGGAGGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACCGACAAGTTG
AGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACAGATAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCC
AAACCAGGTGAAAAGGACCTGCTATGCACAGTCCAGCCAGATCAGGCAGATCCGACGCAAGATGAGGGAAATCATGGTAAACCAAGCATCCTCTTGTGATTTGAAGGAAT
TGGTTCGCAAGTTCATTCCAGAGTCGATTGGAAAGGAGATTGAAAAGGCAACATCCAGCATCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAAGCT
CCCAAATTTGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGAGTGAAGGTTGAGAGACCAGCAGATGAAGCCGAGGCAGAGGCCCCTACTGA
AATAGTTGGAGCTTGA

mRNA sequence

Show/hide mRNA sequence

AATTATTTAAAAGAAAATAAATGTTGTAGAAAAATATTTAAAAAACAAAAAAGCTGATTTTATATAAACGCAGGTTTTAGGGTTTTGGAAGCTCTGGAACTTTTTCTGCC
GTGCATCATAACATCGGAGCAGAGTTAGGGCAACTCAAAGTCCTTCAGCCATGGCCGTCGGTAAGAACAAGCGGATTTCGAAGGGAAAGAAGGGAGGCAAGAAGAAAGCC
ACCGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCGCCTTCTGTTTTCACTGTTAAGAATGTGGGAAAGACTCTTGTTACGCGTACGCAGGGTACCAAGATTGC
TTCTGAAGGACTCAAGCATAGAGTCTTCGAAGTCTCGTTGGCTGATCTTCAGAATGATGAGGAGCACGCATACAGGAAGATTCGGTTGAGAGCAGAAGATGTTCAAGGGA
GGAATGTCCTGACAAATTTCTGGGGAATGAACTTCACTACCGACAAGTTGAGGTCTTTAGTACGCAAGTGGCATACTTTGATTGAAGCTCATGTAGATGTCAAAACCACA
GATAACTACACCCTTAGAATGTTTTGCATTGGGTTCACTAAGAGAAGGCCAAACCAGGTGAAAAGGACCTGCTATGCACAGTCCAGCCAGATCAGGCAGATCCGACGCAA
GATGAGGGAAATCATGGTAAACCAAGCATCCTCTTGTGATTTGAAGGAATTGGTTCGCAAGTTCATTCCAGAGTCGATTGGAAAGGAGATTGAAAAGGCAACATCCAGCA
TCTACCCTCTTCAAAATGTGTTTATCCGGAAAGTTAAAATTTTGAAAGCTCCCAAATTTGATCTTGGGAAGTTGATGGAGGTTCATGGCGACTACTCAGAAGACGTTGGA
GTGAAGGTTGAGAGACCAGCAGATGAAGCCGAGGCAGAGGCCCCTACTGAAATAGTTGGAGCTTGAGTTCAGTTATGTTGAATTTTTCTTTTGAGCTGGATTAATTTATT
GTAGTTTAATTTTACCCCCCTTTGTTTACGAACTCAGTTTTAACCCGCATCTCGATATAGTCGAGCAATTTTGCGGTACAAGTCCTTTGTCAAGAATACTATCATTGAAT
TAATTTAGGAAATTGCACTGTTTTTAACCTAGCATGTTTGACATGTCACTTCTTTCGATTTTTTCTCGAATCGATGGGAATAGGGCACCCACCTGCTGTGTATTATAAAA
TGCTAAACAAGCATGTCTTGCATTTGGTCAAGAAAATTTGTATGTGCTTGTTAGGGGTAGAAATCTAAGTTTCAACCCTTTTCGTTATGCACTTGGGCTCGAAATTCCTT
TGGCTCATTAATAAAAAACCAAAGTTATAAATAAGACCATGGAATTGAAACATTGGAACAAAACTGTGCAAGGGGGAATTGGAGTGAAGCAGCATTTTCAAACTCTGCCA
ACTGGGAGGATTGGAAATGTAGCGTGTGACATCAAACTTGTTTTGTCCCCAAGGAGTGGCGTATTGGTGGAAGGTTCTCTGCAATGGTGGAAGATTTGGACATTAAAGGT
GTGTGCTCTCCCCAAGATTTTAGGTTTGAGACTTACCCGTGACATTAATGTGTAGACATTTCTCGTATGGACATTCCTTTGATAAGTTTATCGAAACTCAAATTTCCTGG
TTTCTAAAATAAAAATAAGAACATCAAACTTATTTCCTACCTAGCTAAAAAGTACCAGAC

Protein sequence

Show/hide protein sequence

MAVGKNKRISKGKKGGKKKATDPFAKKDWYDIKAPSVFTVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEEHAYRKIRLRAEDVQGRNVLTNFWGMNFTTDKL
RSLVRKWHTLIEAHVDVKTTDNYTLRMFCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKILKA
PKFDLGKLMEVHGDYSEDVGVKVERPADEAEAEAPTEIVGA

Sed0027097 (gene) of Chayote v1 genome