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Sed0027102 (gene) of Chayote v1 genome

Gene IDSed0027102
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:37636066..37638025
RNA-Seq ExpressionSed0027102
SyntenySed0027102
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004527 - exonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN52709.2 hypothetical protein Csa_008507 [Cucumis sativus]6.1e-1153.06Show/hide
Query:  MGRRRIEMALILMVIYSSMPASFAFTQISTTVDGNGK---RDYNISVAVFHEGRSGGRGVVPIYAAAASTHRRGEHYSAANNRHQNYYIPILFIIVGV
        MGRRR EMA IL+++ SSM ASFAFTQ+  T+D       R++N S   F E R GGRGV+PIY A AS+ R G+H  +  NR  NY   I FII+GV
Subjt:  MGRRRIEMALILMVIYSSMPASFAFTQISTTVDGNGK---RDYNISVAVFHEGRSGGRGVVPIYAAAASTHRRGEHYSAANNRHQNYYIPILFIIVGV
TrEMBL top hitse value%identityAlignment
A0A0A0KTE6 Uncharacterized protein3.2e-0550Show/hide
Query:  MPASFAFTQISTTVDGNGK---RDYNISVAVFHEGRSGGRGVVPIYAAAASTHRRGEHYSAANNRHQNYYIPILFIIVGV
        M ASFAFTQ+  T+D       R++N S   F E R GGRGV+PIY A AS+ R G+H  +  NR  NY   I FII+GV
Subjt:  MPASFAFTQISTTVDGNGK---RDYNISVAVFHEGRSGGRGVVPIYAAAASTHRRGEHYSAANNRHQNYYIPILFIIVGV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGAAGAAGAATAGAGATGGCGTTGATTTTGATGGTGATTTATTCGTCCATGCCGGCTTCCTTTGCTTTTACACAAATCTCTACCACAGTGGATGGCAATGGTAA
AAGAGATTATAATATAAGTGTTGCAGTATTTCATGAGGGCCGATCCGGAGGTAGAGGCGTAGTCCCAATATATGCTGCCGCTGCTTCTACACATCGCCGAGGAGAACATT
ACAGCGCAGCAAATAATCGCCATCAAAATTACTACATCCCGATATTATTTATAATTGTCGGAGTTCTTACCTTAAATATTGCATATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGAAGAAGAATAGAGATGGCGTTGATTTTGATGGTGATTTATTCGTCCATGCCGGCTTCCTTTGCTTTTACACAAATCTCTACCACAGTGGATGGCAATGGTAA
AAGAGATTATAATATAAGTGTTGCAGTATTTCATGAGGGCCGATCCGGAGGTAGAGGCGTAGTCCCAATATATGCTGCCGCTGCTTCTACACATCGCCGAGGAGAACATT
ACAGCGCAGCAAATAATCGCCATCAAAATTACTACATCCCGATATTATTTATAATTGTCGGAGTTCTTACCTTAAATATTGCATATTTTTGAGTTGGCGGTAGTGTTCAA
CTCGAGAGATTACAAGTTCGAATCTCTTGTATTTTTATCTAATAACCTAGAAATGGGGATTTGGTTCTCTCATATTTTTCTAATTTAAATCGCACAATTGACCTTATTCG
AATGAATTTGCTTTCTTTTTCTTTTTAATACTTTTGTTTATTTGTTC
Protein sequenceShow/hide protein sequence
MGRRRIEMALILMVIYSSMPASFAFTQISTTVDGNGKRDYNISVAVFHEGRSGGRGVVPIYAAAASTHRRGEHYSAANNRHQNYYIPILFIIVGVLTLNIAYF