CuGenDBv2

Gene ID	Sed0027119
Organism	Sechium edule (Chayote v1)
Description	DNA-dependent metalloprotease WSS1-like isoform X2
Genome location	LG04:45702679..45703369
RNA-Seq Expression	Sed0027119
Synteny	Sed0027119
Gene Ontology terms	GO:0008233 - peptidase activity (molecular function)
InterPro domains	IPR001876 - Zinc finger, RanBP2-type IPR036443 - Zinc finger, RanBP2-type superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6607757.1 hypothetical protein SDJN03_01099, partial [Cucurbita argyrosperma subsp. sororia]

9.4e-37

65.22

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M DRV F QPCAETS++D  CSS NSMPIHDGTLHP E SMWECGNC LLNPPLAPICELC S+K  D+ TK +FWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQP +TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

KAG7037334.1 WSS1 [Cucurbita argyrosperma subsp. argyrosperma]

9.4e-37

65.22

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M DRV F QPCAETS++D  CSS NSMPIHDGTLHP E SMWECGNC LLNPPLAPICELC S+K  D+ TK +FWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQP +TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

XP_023525391.1 uncharacterized protein LOC111789010 [Cucurbita pepo subsp. pepo]

4.2e-37

66.09

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M DRV F QPCAETSS+D  CSS NSMPIHDGTLHP E SMWECGNC LLNPPLAPICELC S+K  D+ TK +FWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQP +TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

XP_023536323.1 uncharacterized protein LOC111797532 isoform X1 [Cucurbita pepo subsp. pepo]

2.7e-36

66.09

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M  RV F Q CAET+S+DL CSS N MPIHDGT HPGE SMWECGNC LLNPPLAPICELCFS KP  + TK KFWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQPV+TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

XP_023536328.1 uncharacterized protein LOC111797532 isoform X4 [Cucurbita pepo subsp. pepo]

2.7e-36

66.09

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M  RV F Q CAET+S+DL CSS N MPIHDGT HPGE SMWECGNC LLNPPLAPICELCFS KP  + TK KFWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQPV+TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E403 uncharacterized protein LOC103501234

1.7e-36

64.6

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Query:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR
        DR++F Q  AE SS+DL CSS N MP HDGT+HPGE SMWECGNC LLNPPLAPICELCFS+KP DS T+ KFWS           L  C+ CG+ RYS 
Subjt:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR

Query:  GQPVATRGPNVVT
        GQPV+TRGPN+ T
Subjt:  GQPVATRGPNVVT

A0A5D3C9S9 DNA damage response protein WSS1

1.7e-36

64.6

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Query:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR
        DR++F Q  AE SS+DL CSS N MP HDGT+HPGE SMWECGNC LLNPPLAPICELCFS+KP DS T+ KFWS           L  C+ CG+ RYS 
Subjt:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR

Query:  GQPVATRGPNVVT
        GQPV+TRGPN+ T
Subjt:  GQPVATRGPNVVT

A0A6J1FKX5 uncharacterized protein LOC111446189 isoform X1

2.2e-36

64.35

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M DRV F QPCAETS++D  CSS NSMPIHDGTLHP E SMWECGNC LLNPPLAPICELC S+K  D+ TK +FWS           L  C  CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQP +TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

A0A6J1IGD8 uncharacterized protein LOC111476695 isoform X4

2.5e-35

65.22

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Query:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY
        M  RV F Q CAETSS+D  CSS N MPIHDGT HPGE SMWECGNC LLNPPLAPICELCFS K   + TK KFWS           L  CS CG+ RY
Subjt:  MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRY

Query:  SRGQPVATRGPNVVT
        S GQPV+TRGPN+ T
Subjt:  SRGQPVATRGPNVVT

A0A6J1IU34 uncharacterized protein LOC111480590 isoform X1

2.2e-36

65.49

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Query:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR
        DRV F QPCAETS++D  C S NSMPIHDGTLHP E SMWECGNC LLNPPLAPICELC S+K  D+ TK +FWS           L  CS CG+ RYS 
Subjt:  DRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSR

Query:  GQPVATRGPNVVT
        GQPV+TRGPN+ T
Subjt:  GQPVATRGPNVVT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G55915.1 zinc ion binding

1.1e-16

42.57

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Query:  SSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSRGQPVATRGPNVV
        SS+ L  +S+N+    +      E +MWEC  C LLNP LAPICELC + KP +   K+K WS           L  C  CG+ RYS G P++T  PNV 
Subjt:  SSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWS-----------LGNCSGCGELRYSRGQPVATRGPNVV

Query:  T
        T
Subjt:  T

Sequences

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CDS sequence

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ATGCTAGATAGAGTTACATTTCGTCAACCTTGTGCAGAAACTAGCTCAATGGATTTGTTCTGTTCATCCTTTAATTCAATGCCGATTCATGATGGAACTCTTCATCCTGG
AGAATTTTCCATGTGGGAGTGCGGAAATTGTATCTTACTGAATCCACCACTAGCGCCGATATGTGAGCTTTGTTTCTCTGAAAAGCCAAATGACAGTGGTACTAAAAACA
AATTCTGGTCATTGGGAAATTGTTCAGGATGTGGTGAATTGAGATATTCTCGTGGACAGCCAGTGGCAACTCGAGGACCAAATGTCGTCACTTTAGAGGCTTACGATTAT
GATATATCCTCGTAA

mRNA sequence

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Protein sequence

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MLDRVTFRQPCAETSSMDLFCSSFNSMPIHDGTLHPGEFSMWECGNCILLNPPLAPICELCFSEKPNDSGTKNKFWSLGNCSGCGELRYSRGQPVATRGPNVVTLEAYDY
DISS

Sed0027119 (gene) of Chayote v1 genome