; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0027145 (gene) of Chayote v1 genome

Gene IDSed0027145
OrganismSechium edule (Chayote v1)
DescriptionTF-B3 domain-containing protein
Genome locationLG08:6276959..6277552
RNA-Seq ExpressionSed0027145
SyntenySed0027145
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR003340 - B3 DNA binding domain
IPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043114.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]2.5e-3742.79Show/hide
Query:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSRH--ELLNLADRFVEVELLNHNALPPPVDDDPPAEDE------------------------GDRAREGVP
        MV +   Y+++    +VY A + L  ++ S    E  N       + +++    PP V++ PP  +E                         DR    +P
Subjt:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSRH--ELLNLADRFVEVELLNHNALPPPVDDDPPAEDE------------------------GDRAREGVP

Query:  AIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG
         +A   N+IG CSPPF K LTK+DV+   GRLAL KEFV  +  PMFN DE L  GI VTV+D++GR+Y+MTF+LWTSKLYVLT  W  FY  N LT P 
Subjt:  AIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG

Query:  LNITLWMFRHVVTHRLCFAIIQ
          ITLWMFRHVV H+LCFAI++
Subjt:  LNITLWMFRHVVTHRLCFAIIQ

KAG6589940.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]4.1e-4067.21Show/hide
Query:  VPAIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTE
        +PA+A   N+IGA SPP++K LTKSDVS G GRL + KEFVT H  PMFNADED  EGI VTV++ +GRQY+M FKLW SKLYVLT GW  FY+ NNLT+
Subjt:  VPAIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTE

Query:  PGLNITLWMFRHVVTHRLCFAI
        PGL +TLWMFRHV TH++CFA+
Subjt:  PGLNITLWMFRHVVTHRLCFAI

KAG7023605.1 putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-4068.03Show/hide
Query:  VPAIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTE
        +PA+A   N+IGA SPP++K LTKSDVS G GRL + KEFVT H  PMFNADED  EGI VTV++ +GRQY+M FKLW SKLYVLT GW  FY+ NNLTE
Subjt:  VPAIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTE

Query:  PGLNITLWMFRHVVTHRLCFAI
        PGL +TLWMFRHV TH++CFA+
Subjt:  PGLNITLWMFRHVVTHRLCFAI

KGN56101.1 hypothetical protein Csa_010492 [Cucumis sativus]5.9e-3944.14Show/hide
Query:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR--HELLNLADRF------VEVELLNH-----NALPPPVDDDPPAEDEGDRAREGVPA------------
        MV++   Y+++     VY A++ILY + +S+         DRF          L+N      N   P V++  P  D+ +   E V A            
Subjt:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR--HELLNLADRF------VEVELLNH-----NALPPPVDDDPPAEDEGDRAREGVPA------------

Query:  ----IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG
            I N+IG CSPPF K LTK+DV+   GRLAL KEFV L+  PMFN DEDL +GI V V+D +GR+Y+M FKLW SKLYVLT  W  FY+ N+LT+PG
Subjt:  ----IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG

Query:  LNITLWMFRHVVTHRLCFAIIQ
          I++WMFRHVVT +LCFAI++
Subjt:  LNITLWMFRHVVTHRLCFAIIQ

XP_031736688.1 uncharacterized protein LOC116402065 [Cucumis sativus]2.1e-3642.92Show/hide
Query:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR------HELLNLADRF---VEVELLNHNALPPPVDDDPPAEDEG--DRAREGV---------------P
        MV +R  Y+++  +  VY A++ L  ++ SR        +  L +RF     + +LN    PP + +  P  +E   +   E V                
Subjt:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR------HELLNLADRF---VEVELLNHNALPPPVDDDPPAEDEG--DRAREGV---------------P

Query:  AIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNI
         I N+IG CSPPF K L K+DV+   GRLAL KEFVT +  PMFN  E+L  GI VTV+D++GR+Y+M FK WTSKLYVLT  W  FY++NNLT PG  I
Subjt:  AIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNI

Query:  TLWMFRHVVTHRLCFAIIQ
        ++WMFRHVV  +LCFAI++
Subjt:  TLWMFRHVVTHRLCFAIIQ

TrEMBL top hitse value%identityAlignment
A0A0A0L7L0 TF-B3 domain-containing protein2.9e-3944.14Show/hide
Query:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR--HELLNLADRF------VEVELLNH-----NALPPPVDDDPPAEDEGDRAREGVPA------------
        MV++   Y+++     VY A++ILY + +S+         DRF          L+N      N   P V++  P  D+ +   E V A            
Subjt:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSR--HELLNLADRF------VEVELLNH-----NALPPPVDDDPPAEDEGDRAREGVPA------------

Query:  ----IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG
            I N+IG CSPPF K LTK+DV+   GRLAL KEFV L+  PMFN DEDL +GI V V+D +GR+Y+M FKLW SKLYVLT  W  FY+ N+LT+PG
Subjt:  ----IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG

Query:  LNITLWMFRHVVTHRLCFAIIQ
          I++WMFRHVVT +LCFAI++
Subjt:  LNITLWMFRHVVTHRLCFAIIQ

A0A0A0LC65 TF-B3 domain-containing protein1.1e-3561.86Show/hide
Query:  IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNIT
        I N+IG CSPPF K L K+DV+   GRLAL KEFVT +  PMFN  E+L  GI VTV+D++GR+Y+M FK WTSKLYVLT  W  FY++NNLT PG  I+
Subjt:  IANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNIT

Query:  LWMFRHVVTHRLCFAIIQ
        +WMFRHVV  +LCFAI++
Subjt:  LWMFRHVVTHRLCFAIIQ

A0A2P6RSD2 Putative transcription factor B3-Domain family2.2e-2347.06Show/hide
Query:  VPAIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGL
        VP++  +I  CS PF+K LT SDV     RLA+ KE V  H  P+ N  EDL EGI VT +D  G++Y M FK W SK++VLT GW  F   + L +   
Subjt:  VPAIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGL

Query:  NITLWMFRHVVTHRLCFAI
         +T+WMFR++ T  LCF I
Subjt:  NITLWMFRHVVTHRLCFAI

A0A5D3BAS8 Putative B3 domain-containing protein1.2e-3742.79Show/hide
Query:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSRH--ELLNLADRFVEVELLNHNALPPPVDDDPPAEDE------------------------GDRAREGVP
        MV +   Y+++    +VY A + L  ++ S    E  N       + +++    PP V++ PP  +E                         DR    +P
Subjt:  MVNIRPFYHDEEEDPQVYNAAMILYSLRMSRH--ELLNLADRFVEVELLNHNALPPPVDDDPPAEDE------------------------GDRAREGVP

Query:  AIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG
         +A   N+IG CSPPF K LTK+DV+   GRLAL KEFV  +  PMFN DE L  GI VTV+D++GR+Y+MTF+LWTSKLYVLT  W  FY  N LT P 
Subjt:  AIA---NMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPG

Query:  LNITLWMFRHVVTHRLCFAIIQ
          ITLWMFRHVV H+LCFAI++
Subjt:  LNITLWMFRHVVTHRLCFAIIQ

A0A6J1CTE7 putative B3 domain-containing protein At4g031702.9e-3152.32Show/hide
Query:  LNHNALPPPVDDDPPAEDEGDRAREGVPAIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFN---ADEDLVEGIGVTVFDAQGRQYNMT
        +N  A P P +++   E+   R    VPAI ++IG CS  ++K LT SDV+   GRLA+ KEFVT + APMFN    +E+L EGI VTV++ +GR++ MT
Subjt:  LNHNALPPPVDDDPPAEDEGDRAREGVPAIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFN---ADEDLVEGIGVTVFDAQGRQYNMT

Query:  FKLWTSKLYVLTSGWTVFYEANNLT--EPGLNITLWMFRHVVTHRLCFAII
        FK+W SKLYVL  GW  F +ANNLT    G  +TLWMFRH  TH LCFAII
Subjt:  FKLWTSKLYVLTSGWTVFYEANNLT--EPGLNITLWMFRHVVTHRLCFAII

SwissProt top hitse value%identityAlignment
Q9LM90 B3 domain-containing protein At1g206002.1e-0741.77Show/hide
Query:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVF
        S P  K L  SDV     RL L KE V     P     ED V+G+ V+V+   G    M FK+W   K  VLTSGW  F
Subjt:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVF

Q9ZR14 Putative B3 domain-containing protein At4g031701.8e-1442.2Show/hide
Query:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHV
        S P  K L  SDV      L L KE V     P     E+ V+GI V+V+   G+   M FK+W   K  VLTSGW  F E   L+     +T+WMFRH+
Subjt:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHV

Query:  VTHRLCFAI
         T +LCFAI
Subjt:  VTHRLCFAI

Q9ZR15 Putative B3 domain-containing protein At4g031607.9e-1035.64Show/hide
Query:  LTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHVVTHRLCFA
        L  SDV     RL L KE V      +   ++   +G+ V+V+   G  + M  K+W     VLTSGW  F ++  L +    +T+WMFRH  T  +CFA
Subjt:  LTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHVVTHRLCFA

Query:  I
        I
Subjt:  I

Arabidopsis top hitse value%identityAlignment
AT1G20600.1 AP2/B3-like transcriptional factor family protein1.5e-0841.77Show/hide
Query:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVF
        S P  K L  SDV     RL L KE V     P     ED V+G+ V+V+   G    M FK+W   K  VLTSGW  F
Subjt:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVF

AT4G03160.1 BEST Arabidopsis thaliana protein match is: AP2/B3-like transcriptional factor family protein (TAIR:AT4G03170.1)5.6e-1135.64Show/hide
Query:  LTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHVVTHRLCFA
        L  SDV     RL L KE V      +   ++   +G+ V+V+   G  + M  K+W     VLTSGW  F ++  L +    +T+WMFRH  T  +CFA
Subjt:  LTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHVVTHRLCFA

Query:  I
        I
Subjt:  I

AT4G03170.1 AP2/B3-like transcriptional factor family protein1.3e-1542.2Show/hide
Query:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHV
        S P  K L  SDV      L L KE V     P     E+ V+GI V+V+   G+   M FK+W   K  VLTSGW  F E   L+     +T+WMFRH+
Subjt:  SPPFDKTLTKSDVSYGLGRLALFKEFVTLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWT-SKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHV

Query:  VTHRLCFAI
         T +LCFAI
Subjt:  VTHRLCFAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACATAAGACCATTCTACCATGATGAAGAAGAAGACCCCCAAGTCTACAATGCAGCCATGATTCTTTATAGCCTGAGGATGAGTAGACATGAGCTGCTCAATCT
GGCCGATCGTTTCGTTGAAGTCGAGCTACTCAACCACAACGCACTACCACCACCCGTTGACGATGATCCTCCAGCGGAGGATGAAGGAGACAGAGCAAGGGAGGGGGTGC
CAGCAATTGCAAACATGATCGGAGCGTGCAGTCCACCGTTCGACAAGACGTTGACGAAAAGCGACGTATCGTATGGGCTAGGGAGGCTAGCATTGTTCAAGGAATTTGTG
ACCTTGCATTTTGCTCCGATGTTCAACGCCGACGAGGATTTGGTTGAGGGAATCGGCGTGACTGTTTTTGATGCTCAAGGGAGGCAATACAACATGACGTTTAAGCTTTG
GACTTCCAAGCTCTACGTTCTCACCAGCGGATGGACTGTGTTTTATGAAGCTAATAATTTGACTGAGCCTGGCTTGAATATCACTCTATGGATGTTTCGACATGTCGTTA
CTCATAGGCTTTGCTTTGCTATCATTCAGAGAATGGATGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACATAAGACCATTCTACCATGATGAAGAAGAAGACCCCCAAGTCTACAATGCAGCCATGATTCTTTATAGCCTGAGGATGAGTAGACATGAGCTGCTCAATCT
GGCCGATCGTTTCGTTGAAGTCGAGCTACTCAACCACAACGCACTACCACCACCCGTTGACGATGATCCTCCAGCGGAGGATGAAGGAGACAGAGCAAGGGAGGGGGTGC
CAGCAATTGCAAACATGATCGGAGCGTGCAGTCCACCGTTCGACAAGACGTTGACGAAAAGCGACGTATCGTATGGGCTAGGGAGGCTAGCATTGTTCAAGGAATTTGTG
ACCTTGCATTTTGCTCCGATGTTCAACGCCGACGAGGATTTGGTTGAGGGAATCGGCGTGACTGTTTTTGATGCTCAAGGGAGGCAATACAACATGACGTTTAAGCTTTG
GACTTCCAAGCTCTACGTTCTCACCAGCGGATGGACTGTGTTTTATGAAGCTAATAATTTGACTGAGCCTGGCTTGAATATCACTCTATGGATGTTTCGACATGTCGTTA
CTCATAGGCTTTGCTTTGCTATCATTCAGAGAATGGATGATTAG
Protein sequenceShow/hide protein sequence
MVNIRPFYHDEEEDPQVYNAAMILYSLRMSRHELLNLADRFVEVELLNHNALPPPVDDDPPAEDEGDRAREGVPAIANMIGACSPPFDKTLTKSDVSYGLGRLALFKEFV
TLHFAPMFNADEDLVEGIGVTVFDAQGRQYNMTFKLWTSKLYVLTSGWTVFYEANNLTEPGLNITLWMFRHVVTHRLCFAIIQRMDD