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Sed0027146 (gene) of Chayote v1 genome

Gene IDSed0027146
OrganismSechium edule (Chayote v1)
DescriptionPathogenesis-related protein PR-4-like
Genome locationLG11:2042163..2044765
RNA-Seq ExpressionSed0027146
SyntenySed0027146
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsIPR001153 - Barwin domain
IPR018226 - Barwin, conserved site
IPR036908 - RlpA-like domain superfamily
IPR044301 - Pathogenesis-related protein-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063601.1 pathogenesis-related protein PR-4-like [Cucumis melo var. makuwa]1.3e-5973.24Show/hide
Query:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV
        K+  +++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+CATWDA+KPL WR+ YGWTAFCGPVGPTGRDSCGRCL+V+NTETGDE+ V
Subjt:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV

Query:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLDY+VF  LD+NGNG ARGHLIVDY FVNC
Subjt:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

XP_004139241.1 pathogenesis-related protein PR-4 [Cucumis sativus]1.3e-5971.53Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        M++ SL+++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+C+TWDA+KPL WR+ YGWTAFCGPVGP+GR+SCGRCL+V+NTETGDE+
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQC+NGGLDLD+ VF  LDTNGNG ARGHLIVDY FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]5.1e-5673.61Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+KPLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  +
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQCANGGLDLD NVF  +DTNGNG  RGHL V+Y+FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

XP_031129054.1 pathogenesis-related protein PR-4-like [Ipomoea triloba]2.3e-5677.44Show/hide
Query:  LSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANG
        L L  ++VGGA  QSATNVRATYN+Y+PQNINWDY RASV+CATWD +KPLEWRR+YGWTAFCGPVGP GRDSCGRCLKV NT T  +  VRIVDQCANG
Subjt:  LSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANG

Query:  GLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        GLDLD NVF  LDT+G G ARGHLIV+Y+FVNC
Subjt:  GLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

XP_038891021.1 pathogenesis-related protein PR-4-like [Benincasa hispida]3.4e-6075.35Show/hide
Query:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV
        K+  +++L L+LWASLVGG  GQSA+NV ATYNLY+PQ INW+Y  ASVYCATWDA+KPL WR  YGWTAFCGP GPTGRDSCG CL+V+NTETGDE+ V
Subjt:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV

Query:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLDY VF  LDTNGNG A GHL+VDY FVNC
Subjt:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein2.5e-5673.61Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        M K S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDADKPLEWRR+YGWTAFCGPVGP GRDSCGRCL+V NTETG  +
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQCANGGLDLD NVF  +DTNGNG  RGHLIV+Y+FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

A0A0A0LJA9 Barwin domain-containing protein6.3e-6071.53Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        M++ SL+++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+C+TWDA+KPL WR+ YGWTAFCGPVGP+GR+SCGRCL+V+NTETGDE+
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQC+NGGLDLD+ VF  LDTNGNG ARGHLIVDY FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like2.5e-5673.61Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+KPLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  +
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQCANGGLDLD NVF  +DTNGNG  RGHL V+Y+FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

A0A5A7VCZ9 Pathogenesis-related protein PR-4-like6.3e-6073.24Show/hide
Query:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV
        K+  +++  L+LWASL+G   GQSA+NV ATYN Y+PQ I W+Y  ASV+CATWDA+KPL WR+ YGWTAFCGPVGPTGRDSCGRCL+V+NTETGDE+ V
Subjt:  KKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKV

Query:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        RIVDQC+NGGLDLDY+VF  LD+NGNG ARGHLIVDY FVNC
Subjt:  RIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like2.5e-5673.61Show/hide
Query:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ
        MEK S++++L L+L   ++  A  QSATNVRATY+LY+PQ+INWDY RASV+CATWDA+KPLEWRRRYGWTAFCGPVGP GRDSCGRCL+V NTETG  +
Subjt:  MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQ

Query:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
         VRIVDQCANGGLDLD NVF  +DTNGNG  RGHL V+Y+FVNC
Subjt:  KVRIVDQCANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN19.7e-5068.91Show/hide
Query:  SATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDT
        SA NVRATY++Y+PQN+ WD +  S YC+TWDA+KPL WR++YGWTAFCGPVGP GRDSCG+CL+V NT TG +  VRIVDQC+NGGLDLD NVF  +DT
Subjt:  SATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMILDT

Query:  NGNGIARGHLIVDYEFVNC
        +GNG  +GHLIV+Y+FV+C
Subjt:  NGNGIARGHLIVDYEFVNC

P09762 Wound-induced protein WIN26.3e-4967.77Show/hide
Query:  GQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMIL
        G SA NVRATY++Y+PQN+ WD +  S YC+TWDA+KP  WR +YGWTAFCGPVGP GRDSCG+CL+V NT TG +  VRIVDQC+NGGLDLD NVF  +
Subjt:  GQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFMIL

Query:  DTNGNGIARGHLIVDYEFVNC
        DT+G G  +GHLIV+Y+FVNC
Subjt:  DTNGNGIARGHLIVDYEFVNC

P29062 Pathogenesis-related protein PR-4A2.7e-5267.15Show/hide
Query:  LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQ
        L + L + + ++  A  QSATNVR+TY+LY+PQNINWD   AS +CATWDADKPL WR++YGWTAFCGP GP G+DSCGRCL+V NT TG +  VRIVDQ
Subjt:  LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQ

Query:  CANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        C+NGGLDLD NVF  LDTNG G  +GHL V+YEFVNC
Subjt:  CANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

P29063 Pathogenesis-related protein PR-4B4.2e-5367.88Show/hide
Query:  LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQ
        L + L + + ++  A  QSATNVR+TY+LY+PQNINWD   AS +CATWDADKPL WR++YGWTAFCGP GP G+DSCGRCL+V NT TG +  VRIVDQ
Subjt:  LMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQ

Query:  CANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC
        C+NGGLDLD NVF  LDTNG G  +GHLIV+YEFVNC
Subjt:  CANGGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC

P32045 Pathogenesis-related protein P22.2e-5478.05Show/hide
Query:  AVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFM
        A  QSATNVRATY+LY+PQNINWD   ASVYCATWDADKPLEWRRRYGWTAFCGP GPTG+ SCGRCL+V NT TG ++ VRIVDQC NGGLDLD NVF 
Subjt:  AVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLDLDYNVFM

Query:  ILDTNGNGIARGHLIVDYEFVNC
         LDTNG G  RG+L V+YEFVNC
Subjt:  ILDTNGNGIARGHLIVDYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 43.9e-4661.54Show/hide
Query:  WASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLD
        W S   G  G+SA+NVRATY+ Y+P   NWD    S YC+TWDADKP  WR +YGWTAFCGP GP G+ SCG+CL+VKNT T     VRIVDQC+NGGLD
Subjt:  WASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCANGGLD

Query:  LDYNVFMILDTNGNGIARGHLIVDYEFVNC
        LD  +F  +DT+G G  +GHLIVDY+FV+C
Subjt:  LDYNVFMILDTNGNGIARGHLIVDYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAAAAAGTTTGGTTTTGATGTTGGGTTTGTCTTTGTGGGCGAGTCTGGTCGGCGGCGCCGTCGGCCAAAGCGCCACAAATGTGAGGGCTACCTATAATTTATA
CGATCCTCAAAACATAAACTGGGATTATAGCCGTGCCAGTGTTTACTGTGCCACGTGGGACGCCGATAAGCCACTCGAGTGGCGCCGCCGCTACGGTTGGACTGCGTTCT
GCGGCCCTGTCGGTCCTACTGGTCGAGATTCTTGCGGCCGTTGTCTCAAGGTAAAAAATACAGAGACAGGAGATGAGCAAAAAGTAAGAATTGTGGATCAATGTGCCAAT
GGAGGCTTAGATTTGGACTATAATGTGTTCATGATATTAGACACTAATGGCAATGGCATTGCTCGTGGCCATCTTATAGTTGATTACGAGTTTGTTAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAATAAAGAGAAAAAAAATGGAGAAAAAAAGTTTGGTTTTGATGTTGGGTTTGTCTTTGTGGGCGAGTCTGGTCGGCGGCGCCGTCGGCCAAAGCGCCACAAATG
TGAGGGCTACCTATAATTTATACGATCCTCAAAACATAAACTGGGATTATAGCCGTGCCAGTGTTTACTGTGCCACGTGGGACGCCGATAAGCCACTCGAGTGGCGCCGC
CGCTACGGTTGGACTGCGTTCTGCGGCCCTGTCGGTCCTACTGGTCGAGATTCTTGCGGCCGTTGTCTCAAGGTAAAAAATACAGAGACAGGAGATGAGCAAAAAGTAAG
AATTGTGGATCAATGTGCCAATGGAGGCTTAGATTTGGACTATAATGTGTTCATGATATTAGACACTAATGGCAATGGCATTGCTCGTGGCCATCTTATAGTTGATTACG
AGTTTGTTAATTGCTAACAATTTTAATCTTTTCAATCTTTCCATATACAAGGATATGAAAAAAAAAAAAAACAATTGTACCGAAATAAATAAACTATGATTAAGTTCCTC
TCAATAAATTAACAAACACGAGATTTCGATAAAGAATAAAAAATGGGATACGTGTAAATGAATTTAAATTGTACTCATCTATACAAAATGTGAGTATAATCTATAATTTA
TTCTTTTGTTTCAATTTCTCTTATATACAAACATTTCGAGAGCTTTGCTGCTTGTTATTAACTTGTTTTAGAATGTGAAATTGTGATCTCAAGGGCTTTGCAACTTATTT
TTTAGCGTGCTTTGTTGAACTTTGAACTAATCCTTTATTAGTTGATCTGTAGATCGGTCCTCGGTCTTAGGACTTGCAAGCTTGTTTTCAAACGGAGAGAGATTGAATCT
TCAACTTGTAGATAGTGAA
Protein sequenceShow/hide protein sequence
MEKKSLVLMLGLSLWASLVGGAVGQSATNVRATYNLYDPQNINWDYSRASVYCATWDADKPLEWRRRYGWTAFCGPVGPTGRDSCGRCLKVKNTETGDEQKVRIVDQCAN
GGLDLDYNVFMILDTNGNGIARGHLIVDYEFVNC