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Sed0027154 (gene) of Chayote v1 genome

Gene IDSed0027154
OrganismSechium edule (Chayote v1)
Descriptionprotein PLASTID REDOX INSENSITIVE 2-like
Genome locationLG06:40875867..40877812
RNA-Seq ExpressionSed0027154
SyntenySed0027154
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601371.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]6.6e-7181.4Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPP--FPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDS
        MA Y C LVSA+AVSPAK    NGL +PTF P    SLVNPFVN TLTSS  YRA P PA  VYPDPIPEFAE ET+KFKEQLS+KL KDRETFGNDLDS
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPP--FPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDS

Query:  VVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        VV+VC KIF EYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQN+LDHDWNIW SK GLK
Subjt:  VVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

XP_004135230.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic isoform X1 [Cucumis sativus]2.1e-7282.35Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA YG ALVSA+ VSPAKI   NGL +PTF  FPS V P VN TLTSS  YRA PI A YVYP+PIPEFAE ETQKFKEQLS+KL KDRETFGND DSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        DVC KIFGEYLHVEYGGPGTL+VEPFTNMFIALNERKL GAPLAARTSLLWAQNHLD+DWNIWNSKGG K
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

XP_008446243.1 PREDICTED: uncharacterized protein LOC103489034 isoform X1 [Cucumis melo]2.2e-7482.94Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA YGCALVSA+ VSPAKI   NGL +PTF  FPS V P VN TLTSS  YRA PI A YVYP+PIPEFAE ETQKFKEQLS+KL KDRETFGND DSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        DVC KIFGEYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN+LD+DWNIWNSKGG K
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

XP_022151033.1 protein PLASTID REDOX INSENSITIVE 2-like [Momordica charantia]2.1e-7282.04Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MAL+GCAL+ A AV PAKI   NGLLHPTF PFPSLV PFVN T TSSFSYRA P+P K+VYPDPIPEFAEAET+KF+E LS+KL +DR TFGNDLD VV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKG
        +VC KIFGEYLHVEYGGP TLLVEPFTNMFIALNERKLPGA LAARTSLLWAQNHLD DW IWNSKG
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKG

XP_038891536.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]1.8e-7685.29Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA YGCALV A+AVSPAKI   NGL +P F  FPS V PFVN TLTSSF YRA PIPA YVYP+PIPEFAE ETQKFKEQLS+KL KDRETFGNDLDSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        DVC KIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGA LAARTSLLWAQNHLDHDWNIWN KG LK
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

TrEMBL top hitse value%identityAlignment
A0A1S3BEK8 uncharacterized protein LOC103489034 isoform X11.1e-7482.94Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA YGCALVSA+ VSPAKI   NGL +PTF  FPS V P VN TLTSS  YRA PI A YVYP+PIPEFAE ETQKFKEQLS+KL KDRETFGND DSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        DVC KIFGEYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN+LD+DWNIWNSKGG K
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

A0A5A7SZ04 Uncharacterized protein1.1e-7482.94Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA YGCALVSA+ VSPAKI   NGL +PTF  FPS V P VN TLTSS  YRA PI A YVYP+PIPEFAE ETQKFKEQLS+KL KDRETFGND DSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        DVC KIFGEYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQN+LD+DWNIWNSKGG K
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

A0A6J1DB25 protein PLASTID REDOX INSENSITIVE 2-like1.0e-7282.04Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MAL+GCAL+ A AV PAKI   NGLLHPTF PFPSLV PFVN T TSSFSYRA P+P K+VYPDPIPEFAEAET+KF+E LS+KL +DR TFGNDLD VV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKG
        +VC KIFGEYLHVEYGGP TLLVEPFTNMFIALNERKLPGA LAARTSLLWAQNHLD DW IWNSKG
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKG

A0A6J1GYK9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X17.9e-7080.92Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPT-FPPFPSLVNPFVNRTLTSSFSYRAAPIP--AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLD
        MA Y C LVSA+AVSPAK    NGL +PT FP   SLVNPFVN TLTSS  YRA P P  A  VYPDPIPEFAE ET+KFKEQLS+KL KDRETFGNDLD
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPT-FPPFPSLVNPFVNRTLTSSFSYRAAPIP--AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLD

Query:  SVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        SVV+VC KIF EYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQN+LDHDWNIW SK GLK
Subjt:  SVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

A0A6J1JDH3 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X16.7e-6979.41Show/hide
Query:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV
        MA Y C LVSA+AVSPAK    NGL +PTF P  SL  PFVN TLTSS  YRA P  A  VY DPIPEFAE ET+KFKEQLS+KL KDRETFGNDLDSVV
Subjt:  MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVV

Query:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK
        +VC KIF EYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQN+LDHDWNIW SK GLK
Subjt:  DVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic8.0e-2750Show/hide
Query:  YVYPDPIPEFAEAETQKFKEQLSRKLEKDRET-FGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDH
        Y +PDPIPEFAE ET KF+E ++ +LE+ +E  FG+ ++ +VDVC +I G +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+ ++D 
Subjt:  YVYPDPIPEFAEAETQKFKEQLSRKLEKDRET-FGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDH

Query:  DWNIWNSK
        DW  W  +
Subjt:  DWNIWNSK

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic8.8e-2649.07Show/hide
Query:  YVYPDPIPEFAEAETQKFKEQLSRKLEKDRET-FGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDH
        Y +PDPIPEFA  ET KFKE +  +LE+ ++  FG  ++ +VDVC +I G +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+ ++D 
Subjt:  YVYPDPIPEFAEAETQKFKEQLSRKLEKDRET-FGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDH

Query:  DWNIWNSK
        DW  W  +
Subjt:  DWNIWNSK

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic5.9e-3056.6Show/hide
Query:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD
        A+Y +PDPIPEFAEAET+KF++ +  KL K R+ F + +D +V VC +IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+H+D
Subjt:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD

Query:  HDWNIW
         DW  W
Subjt:  HDWNIW

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein4.2e-3156.6Show/hide
Query:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD
        A+Y +PDPIPEFAEAET+KF++ +  KL K R+ F + +D +V VC +IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+H+D
Subjt:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD

Query:  HDWNIW
         DW  W
Subjt:  HDWNIW

AT1G10522.2 unknown protein4.2e-3156.6Show/hide
Query:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD
        A+Y +PDPIPEFAEAET+KF++ +  KL K R+ F + +D +V VC +IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+H+D
Subjt:  AKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLD

Query:  HDWNIW
         DW  W
Subjt:  HDWNIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCTCTACGGTTGCGCTCTGGTCTCGGCCATGGCGGTTTCTCCCGCCAAGATCCCACGTTCCAACGGTCTTCTTCATCCAACATTTCCCCCTTTCCCTTCCCTCGT
AAATCCCTTCGTCAATCGTACCTTAACTTCGTCCTTCAGTTACAGAGCCGCTCCGATTCCGGCCAAGTATGTTTACCCAGATCCGATACCGGAATTTGCAGAAGCTGAAA
CCCAGAAATTTAAGGAGCAGTTGTCGAGGAAGCTAGAAAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGATGTTTGCTTCAAGATATTTGGTGAATAT
TTGCACGTGGAGTACGGAGGCCCTGGGACATTATTGGTGGAACCTTTCACCAATATGTTTATTGCTCTCAATGAGAGGAAACTACCAGGAGCGCCTTTGGCTGCAAGAAC
TTCGCTCCTTTGGGCTCAAAATCATCTAGATCATGATTGGAACATTTGGAACTCTAAAGGAGGGCTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCTCTACGGTTGCGCTCTGGTCTCGGCCATGGCGGTTTCTCCCGCCAAGATCCCACGTTCCAACGGTCTTCTTCATCCAACATTTCCCCCTTTCCCTTCCCTCGT
AAATCCCTTCGTCAATCGTACCTTAACTTCGTCCTTCAGTTACAGAGCCGCTCCGATTCCGGCCAAGTATGTTTACCCAGATCCGATACCGGAATTTGCAGAAGCTGAAA
CCCAGAAATTTAAGGAGCAGTTGTCGAGGAAGCTAGAAAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGATGTTTGCTTCAAGATATTTGGTGAATAT
TTGCACGTGGAGTACGGAGGCCCTGGGACATTATTGGTGGAACCTTTCACCAATATGTTTATTGCTCTCAATGAGAGGAAACTACCAGGAGCGCCTTTGGCTGCAAGAAC
TTCGCTCCTTTGGGCTCAAAATCATCTAGATCATGATTGGAACATTTGGAACTCTAAAGGAGGGCTTAAATGA
Protein sequenceShow/hide protein sequence
MALYGCALVSAMAVSPAKIPRSNGLLHPTFPPFPSLVNPFVNRTLTSSFSYRAAPIPAKYVYPDPIPEFAEAETQKFKEQLSRKLEKDRETFGNDLDSVVDVCFKIFGEY
LHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNHLDHDWNIWNSKGGLK