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Sed0027155 (gene) of Chayote v1 genome

Gene IDSed0027155
OrganismSechium edule (Chayote v1)
DescriptionUBN2_3 domain-containing protein
Genome locationLG11:15294761..15295054
RNA-Seq ExpressionSed0027155
SyntenySed0027155
Gene Ontology termsNA
InterPro domainsIPR029472 - Retrotransposon Copia-like, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA2969677.1 Hypothetical predicted protein [Olea europaea subsp. europaea]2.7e-1650.51Show/hide
Query:  MESKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDD--GELLSLWMRNNHMVIA
        MES+ +  ST     T + ++    P S Y+LHHSD++ L+LVS+ L  DNY +WS++++IALS+KNKLGFID SI  PDD   ELL+ W RNN++VI+
Subjt:  MESKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDD--GELLSLWMRNNHMVIA

XP_022154608.1 uncharacterized protein LOC111021831 [Momordica charantia]2.7e-1654.74Show/hide
Query:  SKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        S  ++ S   ++S L P          YYLHH+D T LVLV++ L E+NY +WS+SM IALSIKNKLGFID SI RP  GELL  W+ NNH+VIA
Subjt:  SKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

XP_031736905.1 uncharacterized protein LOC105434586 isoform X2 [Cucumis sativus]5.9e-1660.29Show/hide
Query:  YYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        Y+LHH+D TNLVLV+E L E+NYV+WS++M I LS+KNK+GF+D +I RP  G+LL +W+RNN++VI+
Subjt:  YYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

XP_038880436.1 uncharacterized protein LOC120072090 [Benincasa hispida]3.7e-1867.61Show/hide
Query:  HSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        ++ Y LHHSDT+NL+LVSELL  DNYV+WSKSM ++LSI+NKLGFID S+ RP  G+LLSLW+RNN++V+A
Subjt:  HSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

XP_038895765.1 uncharacterized protein LOC120083929 [Benincasa hispida]4.5e-1654.84Show/hide
Query:  STEVIESTLIPQVG---SH-GPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        S +   ST  P  G   SH   ++ Y LHHSDT+NLVLVSELL +DNYV+WS+SM + L I+NKLGFID S+ RP  G+LL LW+ NN++V++
Subjt:  STEVIESTLIPQVG---SH-GPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

TrEMBL top hitse value%identityAlignment
A0A1S3C5T4 uncharacterized protein LOC1034967922.1e-1460.56Show/hide
Query:  HSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        +S Y L+HSDT+NL+LV+EL+ ++NYV WS+SM +A+SI+NKLGFID  I +P  GELL LW+ NN++VIA
Subjt:  HSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

A0A6J1DKR8 uncharacterized protein LOC1110218311.3e-1654.74Show/hide
Query:  SKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        S  ++ S   ++S L P          YYLHH+D T LVLV++ L E+NY +WS+SM IALSIKNKLGFID SI RP  GELL  W+ NNH+VIA
Subjt:  SKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

A0A6J1DLQ9 uncharacterized protein LOC1110221171.6e-1463.64Show/hide
Query:  LHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        +HH+DT+NLVLVS+ L   NYV+WS+SM IALSIKNKLGFI+ S+ +P  G+LL +W+RN H+VIA
Subjt:  LHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

A0A6J1DW89 uncharacterized protein LOC1110237028.4e-1653.85Show/hide
Query:  TKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA
        + S+ V  STL        P   YYLHH+D T LV V++LL EDNY +WS+SM I LS+KNKL FID  I RP  G+LL  W+ NNH+VIA
Subjt:  TKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA

A0A7J0FKC9 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein3.2e-1553.66Show/hide
Query:  IPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPD--DGELLSLWMRNNHMVIA
        I ++ +  P S Y+LHHSD   LVLVS+ L  DNY +W+++M IALS+KNKLGFID SI +P+  D  LL+ W+RNN++VI+
Subjt:  IPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPD--DGELLSLWMRNNHMVIA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTAAAACTACAACCAAGTCCACCGAAGTGATTGAATCAACTCTCATCCCTCAAGTTGGTTCACATGGACCCCATAGTCATTATTATCTTCACCATAGTGACAC
AACCAATTTGGTGCTAGTGTCGGAACTTCTGGTTGAAGACAATTATGTTACTTGGAGCAAATCAATGCAAATAGCCCTTTCCATCAAGAATAAGTTGGGTTTTATTGATT
GGTCAATTTTACGACCTGATGATGGTGAACTTTTGTCTTTGTGGATGAGAAACAACCACATGGTAATTGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTCTAAAACTACAACCAAGTCCACCGAAGTGATTGAATCAACTCTCATCCCTCAAGTTGGTTCACATGGACCCCATAGTCATTATTATCTTCACCATAGTGACAC
AACCAATTTGGTGCTAGTGTCGGAACTTCTGGTTGAAGACAATTATGTTACTTGGAGCAAATCAATGCAAATAGCCCTTTCCATCAAGAATAAGTTGGGTTTTATTGATT
GGTCAATTTTACGACCTGATGATGGTGAACTTTTGTCTTTGTGGATGAGAAACAACCACATGGTAATTGCATGA
Protein sequenceShow/hide protein sequence
MESKTTTKSTEVIESTLIPQVGSHGPHSHYYLHHSDTTNLVLVSELLVEDNYVTWSKSMQIALSIKNKLGFIDWSILRPDDGELLSLWMRNNHMVIA