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Sed0027168 (gene) of Chayote v1 genome

Gene IDSed0027168
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG05:42820912..42825490
RNA-Seq ExpressionSed0027168
SyntenySed0027168
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605297.1 hypothetical protein SDJN03_02614, partial [Cucurbita argyrosperma subsp. sororia]1.9e-4970.62Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE IIQP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST   R VSEI+   KN+S  NIRI S+PSRNAQ NIEQS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI +ST S RI Q GE + VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  ++RQR ES KSK +
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

XP_022928064.1 uncharacterized protein LOC111434961 [Cucurbita moschata]1.2e-4869.77Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI
        MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T   S+AA+ASSS++R V + A+KGKNL  QN RI SN  R  QV+ +QSI  EI
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI

Query:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK
         TS++S R+ QV E   VGG+GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE QR+ESRKS+
Subjt:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK

XP_022948005.1 uncharacterized protein LOC111451714 isoform X1 [Cucurbita moschata]1.5e-4971.19Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE I+QP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST   R VSEIA   KN+S  NIRI S+PSRNAQ NIEQS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI  ST S RI Q GE + VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

XP_022971697.1 uncharacterized protein LOC111470367 [Cucurbita maxima]1.5e-4971.51Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI
        MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T S S+AAIASSS+TR V + A+KGKNL  QN RI SN  R AQV+ +QSI  EI
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI

Query:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK
         TS++S R+ QV E   VGG+GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE Q +ESRKS+
Subjt:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK

XP_023534758.1 uncharacterized protein LOC111796230 [Cucurbita pepo subsp. pepo]7.3e-4970.62Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE IIQP VSWLIWIQLL++IL+FA YCL+IFA+DFS  NT   STAAIASSSST   R VSEIA   KN+S  NI I S+PSRNAQ +IEQS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI +ST S RI Q GE + VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

TrEMBL top hitse value%identityAlignment
A0A1S3C6P8 uncharacterized protein LOC1034974671.8e-4871.19Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS-TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE IIQPG+SWLIWIQLLVI+L+F L CL+IFA+DFS ++T    STAAIASSSS TR +S  A  GKN L   NIRIG NP RNAQV  +QS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS-TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI TS+++ RI QVGE   +GGEGSQETK LDLHPCSYFRLAKSAFLRCLGLDSS ENS+ SDERQR ESRKSKE+
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

A0A5A7TVH8 Uncharacterized protein1.8e-4871.19Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS-TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE IIQPG+SWLIWIQLLVI+L+F L CL+IFA+DFS ++T    STAAIASSSS TR +S  A  GKN L   NIRIG NP RNAQV  +QS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHS-GSTAAIASSSS-TRLVSEIAQKGKN-LSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI TS+++ RI QVGE   +GGEGSQETK LDLHPCSYFRLAKSAFLRCLGLDSS ENS+ SDERQR ESRKSKE+
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

A0A6J1EJS6 uncharacterized protein LOC1114349616.0e-4969.77Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI
        MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T   S+AA+ASSS++R V + A+KGKNL  QN RI SN  R  QV+ +QSI  EI
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI

Query:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK
         TS++S R+ QV E   VGG+GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE QR+ESRKS+
Subjt:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK

A0A6J1G8H3 uncharacterized protein LOC111451714 isoform X17.1e-5071.19Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS
        MFN EDE I+QP VSWLIWIQLL++IL+FALYCL+IFA+DFS  +T   STAAIASSSST   R VSEIA   KN+S  NIRI S+PSRNAQ NIEQS  
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSST---RLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSIS

Query:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN
         EI  ST S RI Q GE + VGGEG +ETK L+LHPCSYFRLAKSAFLRCLGLDSSTENSV  +ERQR ES KSK +
Subjt:  REIATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN

A0A6J1I2P0 uncharacterized protein LOC1114703677.1e-5071.51Show/hide
Query:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI
        MFN EDE I++PGVSWLIWIQLLVIILIFALYCL++FAVDFS ++T S S+AAIASSS+TR V + A+KGKNL  QN RI SN  R AQV+ +QSI  EI
Subjt:  MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREI

Query:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK
         TS++S R+ QV E   VGG+GSQETK +DLHPCSYFRLAKSAFLRCLGLDSSTE SV SDE Q +ESRKS+
Subjt:  ATSTSSSRIVQVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G64880.1 unknown protein3.2e-1035.98Show/hide
Query:  VSWLIWIQLLVIILIFALYC-LSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPS--RNAQVNIEQSISREIATSTSSSRIV
        + WLIWIQ+LV +L+  L C + IF+ D    N++S S +  ++S S+     ++     +S   +    N S  ++ QV   QSI  EI T   + R+ 
Subjt:  VSWLIWIQLLVIILIFALYC-LSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPS--RNAQVNIEQSISREIATSTSSSRIV

Query:  QVGEDNAVGGEGSQETKQLDL--HPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK
         V E+    GEGS E        HPC+ FRLA SAFL+C G+D STE    +++  R+ES+K +
Subjt:  QVGEDNAVGGEGSQETKQLDL--HPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCTTGAAGATGAGTTCATAATCCAACCTGGGGTTTCATGGTTAATCTGGATTCAGCTTCTCGTCATCATCCTCATCTTCGCCCTTTACTGTCTCAGCATCTT
CGCTGTTGATTTCTCCACTACCAATACCCACAGCGGATCCACTGCCGCCATTGCTTCCTCTTCTTCTACTCGGCTCGTTTCTGAAATTGCTCAAAAGGGCAAGAATCTTT
CCAAGCAGAACATCAGAATCGGCTCTAATCCGTCGCGGAATGCTCAGGTGAATATTGAGCAAAGCATCAGCAGGGAGATAGCGACAAGTACGAGCAGCAGCAGAATCGTG
CAAGTCGGAGAAGACAACGCAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGCAGCTAGATCTTCACCCTTGCAGTTATTTCAGGCTTGCCAAATCAGCTTTTCTCAGGTG
TCTGGGGTTGGACTCTTCAACAGAGAATTCAGTCTCATCAGATGAAAGGCAAAGAAGGGAATCAAGAAAGTCCAAGGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
CTCGGAATTGGGTTGAAATTTCAACCCTTCTCTATTGATTAACATAGAGGAAAAGGGAAAAAAAAATGGTAGACCTGAAGGGAGTGAATGGTAATAGGTCCGAGTTTGTG
CGAGCCGGTAACAGCGAAACCGTTGAGCTTCAATGTTCTACTTTTTTGTTGTTGCCTTTCCCTTACTTTACTCATTCCTTCCTTCCCCATTCTTCTTCTCCTCAAAAACC
CACATTCAAGAACCCAATTTCACCCCCAAATTGATGCCCAAATATGTTCAATCTTGAAGATGAGTTCATAATCCAACCTGGGGTTTCATGGTTAATCTGGATTCAGCTTC
TCGTCATCATCCTCATCTTCGCCCTTTACTGTCTCAGCATCTTCGCTGTTGATTTCTCCACTACCAATACCCACAGCGGATCCACTGCCGCCATTGCTTCCTCTTCTTCT
ACTCGGCTCGTTTCTGAAATTGCTCAAAAGGGCAAGAATCTTTCCAAGCAGAACATCAGAATCGGCTCTAATCCGTCGCGGAATGCTCAGGTGAATATTGAGCAAAGCAT
CAGCAGGGAGATAGCGACAAGTACGAGCAGCAGCAGAATCGTGCAAGTCGGAGAAGACAACGCAGTAGGAGGGGAAGGCTCTCAAGAAACCAAGCAGCTAGATCTTCACC
CTTGCAGTTATTTCAGGCTTGCCAAATCAGCTTTTCTCAGGTGTCTGGGGTTGGACTCTTCAACAGAGAATTCAGTCTCATCAGATGAAAGGCAAAGAAGGGAATCAAGA
AAGTCCAAGGAAAATTGATGTATGTTTCTCTTTCCCCCTGATAAATGAAAACCATATGCCATTTTATTAATCGGTCACTGTGTCTTCCTACTGTAAATACAACTTTAGAA
AGTAAAAAAAATACGATTCTCATACTGCATGAGATGGCGAAATTGATACATCTTTCCAAATACAACATTAGTGAGTGATGAGAACATTTTGGGGAGATTTTTTTTGGCAT
TTCAGAGTAAAAAGGTAGATAATAGATATCATTGATAATAGTAAATGGTCTTTCCAATAAAGAAAATAACTATAAGTAAATTGTGCATATAGAGTTTACAGTTCTATTTT
TGTAATTCTTAAATTTGTAGTCTCCAAATAGTCTGTCTTAGAGGAAAATTATTGCATGAAAGGATGTTGTATTTGAAGAGAGATGAAACTGACTCATCATAAGCATATCA
AATAGCTCAATGGACATAAAACATGGG
Protein sequenceShow/hide protein sequence
MFNLEDEFIIQPGVSWLIWIQLLVIILIFALYCLSIFAVDFSTTNTHSGSTAAIASSSSTRLVSEIAQKGKNLSKQNIRIGSNPSRNAQVNIEQSISREIATSTSSSRIV
QVGEDNAVGGEGSQETKQLDLHPCSYFRLAKSAFLRCLGLDSSTENSVSSDERQRRESRKSKEN