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Sed0027184 (gene) of Chayote v1 genome

Gene IDSed0027184
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:31774048..31774514
RNA-Seq ExpressionSed0027184
SyntenySed0027184
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579224.1 hypothetical protein SDJN03_23672, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2963.36Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A  S++RLWRRRRYQRLGS  G ARS SFRLGRL R+RRRA  L+ K+ SPLK+L +FHDAYVKMM RVAN+VGNMYAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTCCFQ------LESLESFAASKNL
            L      Q      LE     A SKNL
Subjt:  RTWLLPRTCCFQ------LESLESFAASKNL

KAG7016737.1 hypothetical protein SDJN02_21847, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-3063.36Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A  S++RLWRRRRYQRLGS  G ARS SFRLGRL R+RRRA  L+ K+ SPLK+L +FHDAYVKMM RVAN+VGNMYAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTCCFQ------LESLESFAASKNL
            L      Q      LE     A SKNL
Subjt:  RTWLLPRTCCFQ------LESLESFAASKNL

XP_022959367.1 uncharacterized protein LOC111460357 [Cucurbita moschata]2.2e-2962.88Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A Q MRRLWRRR YQ+LGSD    RS SFRL RL  +RR+AS +Q KI SPLKLL KFHD YV+MMM+VANSVGN+YAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTC-------CFQLESLESFAASKNL
        R  +   TC        F LE     A SKNL
Subjt:  RTWLLPRTC-------CFQLESLESFAASKNL

XP_022993314.1 uncharacterized protein LOC111489358 [Cucurbita maxima]2.6e-3064.12Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A  S++RLWRRRRYQRLGS  G ARS SFRLGRL RIRRRA  L+ K++SP K L +FHDAYVKMMMRVANSVG+MYAIG +GNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTCCFQ------LESLESFAASKNL
            L      Q      LE     AASKNL
Subjt:  RTWLLPRTCCFQ------LESLESFAASKNL

XP_023539255.1 uncharacterized protein LOC111799925 [Cucurbita pepo subsp. pepo]2.4e-3165.15Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A Q MRRLWRRR YQ+LGSD    RS SFRL RL R+RR+AS +Q KIMSPLKLL KFHD YV+MMM+VANSVGN+YAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTC-------CFQLESLESFAASKNL
        R  +   TC        F LE     AASKNL
Subjt:  RTWLLPRTC-------CFQLESLESFAASKNL

TrEMBL top hitse value%identityAlignment
A0A0A0KV01 Uncharacterized protein1.1e-2154.14Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHA-----RSTSFRLGRLSRIRRRAS-TLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGK
        M IIAT  A Q++RRLWRRR YQRLGS    +      S SFR+GR+  +RRR S  ++ K+ SPLK++ K HDAYV+MMMR+ANSVGNMYAIG FGN K
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHA-----RSTSFRLGRLSRIRRRAS-TLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGK

Query:  RIHKPHRTWLL---PRTCCFQLESLESFAASKN
        RI KP     L          LE     AASKN
Subjt:  RIHKPHRTWLL---PRTCCFQLESLESFAASKN

A0A6J1DHB4 uncharacterized protein LOC1110200545.6e-2658.21Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNG---KRIH
        M IIAT P+ +S+RR WRRR+YQRLGS  G  RS SFRLGRL R+RR A  L+ K+ SPLKLL +FHDAYV+MMMRVAN VGNMYAIG FG G   + I 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNG---KRIH

Query:  KPHRTWLLPRTCCFQ------LESLESFAASKNL
        KP     L      Q      LE     AASKNL
Subjt:  KPHRTWLLPRTCCFQ------LESLESFAASKNL

A0A6J1FGC7 uncharacterized protein LOC1114451681.2e-2861.83Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A  S++RLWRRRRYQRLGS  G ARS SF LGRL R+RRRA  L+ K+  P K L +FHDAYVKMM RVAN VGNMYAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTCCFQ------LESLESFAASKNL
            L      Q      LE     AASKNL
Subjt:  RTWLLPRTCCFQ------LESLESFAASKNL

A0A6J1H4C2 uncharacterized protein LOC1114603571.1e-2962.88Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A Q MRRLWRRR YQ+LGSD    RS SFRL RL  +RR+AS +Q KI SPLKLL KFHD YV+MMM+VANSVGN+YAIG FGNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTC-------CFQLESLESFAASKNL
        R  +   TC        F LE     A SKNL
Subjt:  RTWLLPRTC-------CFQLESLESFAASKNL

A0A6J1JZV2 uncharacterized protein LOC1114893581.3e-3064.12Show/hide
Query:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH
        M IIATP A  S++RLWRRRRYQRLGS  G ARS SFRLGRL RIRRRA  L+ K++SP K L +FHDAYVKMMMRVANSVG+MYAIG +GNGKRI KP 
Subjt:  MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPH

Query:  RTWLLPRTCCFQ------LESLESFAASKNL
            L      Q      LE     AASKNL
Subjt:  RTWLLPRTCCFQ------LESLESFAASKNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47485.1 unknown protein1.8e-0541.05Show/hide
Query:  RLWRR-RRYQRLGSDPGHARSTSFRLGRLSRIR----RRASTLQSKIM---------SPLKLLTKFHDAYVKMMMRVANS--VGNMYAIGEFGNG
        R WRR R YQRL    G A+  S     + R++    R+    + KI+         SP KLLT   DAYV MM+R+ANS  VG+ Y  GE+G G
Subjt:  RLWRR-RRYQRLGSDPGHARSTSFRLGRLSRIR----RRASTLQSKIM---------SPLKLLTKFHDAYVKMMMRVANS--VGNMYAIGEFGNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTATCATTGCAACTCCACCAGCTGATCAAAGTATGAGGAGGCTATGGAGAAGAAGAAGGTACCAAAGGCTAGGAAGTGATCCTGGCCATGCAAGATCAACGAGCTT
CAGGCTCGGACGACTATCGCGTATAAGACGACGTGCTTCGACACTGCAATCGAAAATCATGTCACCGTTGAAACTTCTGACGAAGTTTCACGACGCGTATGTCAAGATGA
TGATGAGGGTGGCCAACAGTGTGGGGAATATGTATGCAATTGGAGAGTTTGGCAATGGGAAGAGGATCCATAAACCTCATAGAACTTGGCTGCTTCCAAGAACTTGCTGC
TTCCAATTGGAGAGTTTGGAGAGTTTTGCTGCTTCCAAGAACTTGCTGCTTCCAAGAACTTGGCTGCTTCTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTCCCTTTAAAGCCTCTAGATTTTTTCTCCCAAAAAAAAAAAACCCCCCAAAGCCAAAATGGTTATCATTGCAACTCCACCAGCTGATCAAAGTATGAGGAGGCTATGG
AGAAGAAGAAGGTACCAAAGGCTAGGAAGTGATCCTGGCCATGCAAGATCAACGAGCTTCAGGCTCGGACGACTATCGCGTATAAGACGACGTGCTTCGACACTGCAATC
GAAAATCATGTCACCGTTGAAACTTCTGACGAAGTTTCACGACGCGTATGTCAAGATGATGATGAGGGTGGCCAACAGTGTGGGGAATATGTATGCAATTGGAGAGTTTG
GCAATGGGAAGAGGATCCATAAACCTCATAGAACTTGGCTGCTTCCAAGAACTTGCTGCTTCCAATTGGAGAGTTTGGAGAGTTTTGCTGCTTCCAAGAACTTGCTGCTT
CCAAGAACTTGGCTGCTTCTTTTTTAA
Protein sequenceShow/hide protein sequence
MVIIATPPADQSMRRLWRRRRYQRLGSDPGHARSTSFRLGRLSRIRRRASTLQSKIMSPLKLLTKFHDAYVKMMMRVANSVGNMYAIGEFGNGKRIHKPHRTWLLPRTCC
FQLESLESFAASKNLLLPRTWLLLF